RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 SP8Q8IXZ3 490 aa21.91■■□□□ 1.1
CLDND1-221ENST00000510541 SMC4Q9NTJ3 1288 aa21.91■■□□□ 1.1
CLDND1-221ENST00000510541 MYH3P11055 1940 aa21.9■■□□□ 1.1
CLDND1-221ENST00000510541 ABCC4O15439 1325 aa21.9■■□□□ 1.1
CLDND1-221ENST00000510541 SRCIN1Q9C0H9 1055 aa21.9■■□□□ 1.1
CLDND1-221ENST00000510541 TAOK3Q9H2K8 898 aa21.9■■□□□ 1.1
CLDND1-221ENST00000510541 DICER1Q9UPY3 1922 aaKnown RBP21.89■■□□□ 1.09
CLDND1-221ENST00000510541 F6X3S4 739 aa21.89■■□□□ 1.09
CLDND1-221ENST00000510541 CSF1RP07333 972 aa21.89■■□□□ 1.09
CLDND1-221ENST00000510541 FKBP4Q02790 459 aaKnown RBP eCLIP21.89■■□□□ 1.09
CLDND1-221ENST00000510541 RTFDC1Q9BY42 306 aaPredicted RBP21.89■■□□□ 1.09
CLDND1-221ENST00000510541 API5Q9BZZ5 524 aaKnown RBP21.89■■□□□ 1.09
CLDND1-221ENST00000510541 LRRC37AA6NMS7 1700 aa21.89■■□□□ 1.09
CLDND1-221ENST00000510541 PPEF1O14829 653 aaPredicted RBP21.88■■□□□ 1.09
CLDND1-221ENST00000510541 CTSWP56202 376 aa21.88■■□□□ 1.09
CLDND1-221ENST00000510541 TTLL11Q8NHH1 800 aa21.88■■□□□ 1.09
CLDND1-221ENST00000510541 WWC3Q9ULE0 1092 aa21.88■■□□□ 1.09
CLDND1-221ENST00000510541 CACNA1SQ13698 1873 aa21.88■■□□□ 1.09
CLDND1-221ENST00000510541 GRM8O00222 908 aa21.87■■□□□ 1.09
CLDND1-221ENST00000510541 IPO8O15397 1037 aaKnown RBP21.87■■□□□ 1.09
CLDND1-221ENST00000510541 TMX4Q9H1E5 349 aaPredicted RBP21.87■■□□□ 1.09
CLDND1-221ENST00000510541 RPS8P62241 208 aaKnown RBP21.86■■□□□ 1.09
CLDND1-221ENST00000510541 C9orf131Q5VYM1 1079 aa21.86■■□□□ 1.09
CLDND1-221ENST00000510541 UBE3BQ7Z3V4 1068 aa21.86■■□□□ 1.09
CLDND1-221ENST00000510541 CCT4P50991 539 aaKnown RBP21.85■■□□□ 1.09
CLDND1-221ENST00000510541 ZNF784Q8NCA9 323 aaPredicted RBP21.85■■□□□ 1.09
CLDND1-221ENST00000510541 SUPT20HQ8NEM7 779 aa21.84■■□□□ 1.09
CLDND1-221ENST00000510541 CDC5LQ99459 802 aaKnown RBP21.84■■□□□ 1.09
CLDND1-221ENST00000510541 PRELPP51888 382 aa21.83■■□□□ 1.09
CLDND1-221ENST00000510541 PODXL2Q9NZ53 605 aa21.83■■□□□ 1.09
CLDND1-221ENST00000510541 RNF181Q9P0P0 153 aa21.83■■□□□ 1.09
CLDND1-221ENST00000510541 NOB1Q9ULX3 412 aaKnown RBP21.83■■□□□ 1.09
CLDND1-221ENST00000510541 INTS3Q68E01 1043 aaKnown RBP21.82■■□□□ 1.08
CLDND1-221ENST00000510541 C9orf78Q9NZ63 289 aaPredicted RBP21.82■■□□□ 1.08
CLDND1-221ENST00000510541 HDAC5Q9UQL6 1122 aa21.82■■□□□ 1.08
CLDND1-221ENST00000510541 RASSF7Q02833 373 aa21.81■■□□□ 1.08
CLDND1-221ENST00000510541 RTL5Q5HYW3 569 aaPredicted RBP21.81■■□□□ 1.08
CLDND1-221ENST00000510541 SLC4A10Q6U841 1118 aa21.81■■□□□ 1.08
CLDND1-221ENST00000510541 CELF1Q92879 486 aaKnown RBP21.81■■□□□ 1.08
CLDND1-221ENST00000510541 BCL2L13Q9BXK5 485 aa21.81■■□□□ 1.08
CLDND1-221ENST00000510541 BSDC1Q9NW68 430 aaPredicted RBP21.81■■□□□ 1.08
CLDND1-221ENST00000510541 CCDC88AQ3V6T2 1871 aa21.81■■□□□ 1.08
CLDND1-221ENST00000510541 FOXO4P98177 505 aa21.8■■□□□ 1.08
CLDND1-221ENST00000510541 RABL6Q3YEC7 729 aaPredicted RBP21.8■■□□□ 1.08
CLDND1-221ENST00000510541 USP44Q9H0E7 712 aa21.8■■□□□ 1.08
CLDND1-221ENST00000510541 LTBP1Q14766 1721 aa21.8■■□□□ 1.08
CLDND1-221ENST00000510541 ATF7IPQ6VMQ6 1270 aa21.79■■□□□ 1.08
CLDND1-221ENST00000510541 ANKRD18AQ8IVF6 992 aa21.79■■□□□ 1.08
CLDND1-221ENST00000510541 IARSP41252 1262 aaKnown RBP21.78■■□□□ 1.08
CLDND1-221ENST00000510541 MPNDQ8N594 471 aa21.78■■□□□ 1.08
CLDND1-221ENST00000510541 GLTPD2A6NH11 291 aa21.77■■□□□ 1.08
CLDND1-221ENST00000510541 FZD9O00144 591 aa21.77■■□□□ 1.08
CLDND1-221ENST00000510541 GREM2Q9H772 168 aa21.77■■□□□ 1.08
CLDND1-221ENST00000510541 SEC31BQ9NQW1 1179 aa21.77■■□□□ 1.08
CLDND1-221ENST00000510541 TAF1P21675 1872 aa21.77■■□□□ 1.08
CLDND1-221ENST00000510541 KDM2BQ8NHM5 1336 aa21.77■■□□□ 1.07
CLDND1-221ENST00000510541 NBPF7P0C2Y1 421 aaPredicted RBP21.76■■□□□ 1.07
CLDND1-221ENST00000510541 DPP8Q6V1X1 898 aaPredicted RBP21.76■■□□□ 1.07
CLDND1-221ENST00000510541 TIAM2Q8IVF5 1701 aa21.76■■□□□ 1.07
CLDND1-221ENST00000510541 ZNF219Q9P2Y4 722 aaPredicted RBP21.76■■□□□ 1.07
CLDND1-221ENST00000510541 DUOX1Q9NRD9 1551 aa21.75■■□□□ 1.07
CLDND1-221ENST00000510541 BCAR3O75815 825 aa21.75■■□□□ 1.07
CLDND1-221ENST00000510541 TRIM27P14373 513 aa21.75■■□□□ 1.07
CLDND1-221ENST00000510541 ITGA6P23229 1130 aa21.75■■□□□ 1.07
CLDND1-221ENST00000510541 KIAA2012Q0VF49 1180 aa21.75■■□□□ 1.07
CLDND1-221ENST00000510541 ZKSCAN2Q63HK3 967 aa21.75■■□□□ 1.07
CLDND1-221ENST00000510541 DPY19L2Q6NUT2 758 aa21.75■■□□□ 1.07
CLDND1-221ENST00000510541 OLFM4Q6UX06 510 aa21.75■■□□□ 1.07
CLDND1-221ENST00000510541 JARID2Q92833 1246 aaPredicted RBP21.75■■□□□ 1.07
CLDND1-221ENST00000510541 KAZALD1Q96I82 304 aa21.75■■□□□ 1.07
CLDND1-221ENST00000510541 COL4A1P02462 1669 aa21.73■■□□□ 1.07
CLDND1-221ENST00000510541 ANKRD18BA2A2Z9 1011 aa21.73■■□□□ 1.07
CLDND1-221ENST00000510541 IGHMBP2P38935 993 aaKnown RBP21.73■■□□□ 1.07
CLDND1-221ENST00000510541 IFIT5Q13325 482 aaKnown RBP21.73■■□□□ 1.07
CLDND1-221ENST00000510541 JDP2Q8WYK2 163 aa21.73■■□□□ 1.07
CLDND1-221ENST00000510541 ZNF277Q9NRM2 450 aaPredicted RBP21.73■■□□□ 1.07
CLDND1-221ENST00000510541 XDHP47989 1333 aa21.73■■□□□ 1.07
CLDND1-221ENST00000510541 WDR90Q96KV7 1748 aa21.72■■□□□ 1.07
CLDND1-221ENST00000510541 FAM161AQ3B820 660 aa21.72■■□□□ 1.07
CLDND1-221ENST00000510541 LMBR1LQ6UX01 489 aa21.72■■□□□ 1.07
CLDND1-221ENST00000510541 L3MBTL3Q96JM7 780 aaPredicted RBP21.72■■□□□ 1.07
CLDND1-221ENST00000510541 EYA3Q99504 573 aa21.72■■□□□ 1.07
CLDND1-221ENST00000510541 GPBP1L1Q9HC44 474 aaPredicted RBP21.72■■□□□ 1.07
CLDND1-221ENST00000510541 GNAI3P08754 354 aa21.71■■□□□ 1.07
CLDND1-221ENST00000510541 MS4A1P11836 297 aa21.71■■□□□ 1.07
CLDND1-221ENST00000510541 CCDC57Q2TAC2 916 aa21.71■■□□□ 1.07
CLDND1-221ENST00000510541 EPHA10Q5JZY3 1008 aa21.71■■□□□ 1.07
CLDND1-221ENST00000510541 SUCLG2Q96I99 432 aa21.71■■□□□ 1.07
CLDND1-221ENST00000510541 ANKRD2Q9GZV1 360 aa21.71■■□□□ 1.07
CLDND1-221ENST00000510541 FBXO3Q9UK99 471 aa21.71■■□□□ 1.07
CLDND1-221ENST00000510541 MINPP1Q9UNW1 487 aa21.71■■□□□ 1.07
CLDND1-221ENST00000510541 ATP2B4P23634 1241 aa21.7■■□□□ 1.06
CLDND1-221ENST00000510541 TBC1D16Q8TBP0 767 aa21.7■■□□□ 1.06
CLDND1-221ENST00000510541 NSFL1CQ9UNZ2 370 aaKnown RBP21.7■■□□□ 1.06
CLDND1-221ENST00000510541 LEMD3Q9Y2U8 911 aa21.7■■□□□ 1.06
CLDND1-221ENST00000510541 GPSM2P81274 684 aa21.69■■□□□ 1.06
CLDND1-221ENST00000510541 ANKRD44Q8N8A2 993 aa21.69■■□□□ 1.06
CLDND1-221ENST00000510541 MPHOSPH8Q99549 860 aa21.69■■□□□ 1.06
CLDND1-221ENST00000510541 POLLQ9UGP5 575 aa21.69■■□□□ 1.06
CLDND1-221ENST00000510541 UBTFL1P0CB47 393 aaPredicted RBP21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms