RNA–Protein interactions for RNA: ENST00000510312.6

ARHGEF28-210, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2

Gene ARHGEF28, Length 8,285 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-210ENST00000510312 SP4Q02446 784 aa10.22□□□□□ -0.77
ARHGEF28-210ENST00000510312 RSRC1Q96IZ7 334 aaKnown RBP10.22□□□□□ -0.77
ARHGEF28-210ENST00000510312 DBF4Q9UBU7 674 aaPredicted RBP10.22□□□□□ -0.77
ARHGEF28-210ENST00000510312 KAT6BQ8WYB5 2073 aa10.22□□□□□ -0.77
ARHGEF28-210ENST00000510312 UBE3BQ7Z3V4 1068 aa10.22□□□□□ -0.77
ARHGEF28-210ENST00000510312 NAA15Q9BXJ9 866 aaKnown RBP10.22□□□□□ -0.77
ARHGEF28-210ENST00000510312 DDB1Q16531 1140 aa10.22□□□□□ -0.77
ARHGEF28-210ENST00000510312 GBP6Q6ZN66 633 aa10.22□□□□□ -0.77
ARHGEF28-210ENST00000510312 FMNL3Q8IVF7 1028 aa10.22□□□□□ -0.77
ARHGEF28-210ENST00000510312 MYCBPQ99417 103 aaPredicted RBP10.22□□□□□ -0.77
ARHGEF28-210ENST00000510312 UTP14AQ9BVJ6 771 aaKnown RBP10.22□□□□□ -0.77
ARHGEF28-210ENST00000510312 SYNCQ9H7C4 482 aa10.22□□□□□ -0.77
ARHGEF28-210ENST00000510312 DDX19AQ9NUU7 478 aaKnown RBP10.22□□□□□ -0.77
ARHGEF28-210ENST00000510312 STX8Q9UNK0 236 aa10.22□□□□□ -0.77
ARHGEF28-210ENST00000510312 PHACTR2O75167 634 aa10.22□□□□□ -0.77
ARHGEF28-210ENST00000510312 PUS7Q96PZ0 661 aaKnown RBP10.22□□□□□ -0.77
ARHGEF28-210ENST00000510312 HSPA2P54652 639 aa10.21□□□□□ -0.77
ARHGEF28-210ENST00000510312 POTEDQ86YR6 584 aa10.21□□□□□ -0.77
ARHGEF28-210ENST00000510312 FAM135AQ9P2D6 1515 aa10.21□□□□□ -0.77
ARHGEF28-210ENST00000510312 TROQ12816 1431 aaPredicted RBP10.21□□□□□ -0.77
ARHGEF28-210ENST00000510312 SYCE3A1L190 88 aa10.21□□□□□ -0.77
ARHGEF28-210ENST00000510312 MICU3Q86XE3 530 aa10.21□□□□□ -0.77
ARHGEF28-210ENST00000510312 ADGRL1O94910 1474 aa10.21□□□□□ -0.77
ARHGEF28-210ENST00000510312 IPO4Q8TEX9 1081 aaKnown RBP10.21□□□□□ -0.77
ARHGEF28-210ENST00000510312 PHAXQ9H814 394 aaKnown RBP10.21□□□□□ -0.77
ARHGEF28-210ENST00000510312 ACEP12821 1306 aa10.21□□□□□ -0.78
ARHGEF28-210ENST00000510312 EBAG9O00559 213 aa10.21□□□□□ -0.78
ARHGEF28-210ENST00000510312 KIF5BP33176 963 aa10.21□□□□□ -0.78
ARHGEF28-210ENST00000510312 USP16Q9Y5T5 823 aa10.21□□□□□ -0.78
ARHGEF28-210ENST00000510312 GCOM1H8Y6P7 765 aaPredicted RBP10.21□□□□□ -0.78
ARHGEF28-210ENST00000510312 MYZAPP0CAP1 466 aa10.21□□□□□ -0.78
ARHGEF28-210ENST00000510312 HOOK3Q86VS8 718 aa10.21□□□□□ -0.78
ARHGEF28-210ENST00000510312 SSX2IPQ9Y2D8 614 aa10.21□□□□□ -0.78
ARHGEF28-210ENST00000510312 BIN1O00499 593 aa10.21□□□□□ -0.78
ARHGEF28-210ENST00000510312 NOP2P46087 812 aaKnown RBP10.2□□□□□ -0.78
ARHGEF28-210ENST00000510312 PRKG1Q13976 671 aa10.2□□□□□ -0.78
ARHGEF28-210ENST00000510312 FAM114A1Q8IWE2 563 aa10.2□□□□□ -0.78
ARHGEF28-210ENST00000510312 SIRT1Q96EB6 747 aa10.2□□□□□ -0.78
ARHGEF28-210ENST00000510312 TCP11L1Q9NUJ3 509 aa10.2□□□□□ -0.78
ARHGEF28-210ENST00000510312 RTCBQ9Y3I0 505 aaKnown RBP10.2□□□□□ -0.78
ARHGEF28-210ENST00000510312 SNRPA1P09661 255 aaKnown RBP10.2□□□□□ -0.78
ARHGEF28-210ENST00000510312 IFIT1BQ5T764 474 aaKnown RBP10.2□□□□□ -0.78
ARHGEF28-210ENST00000510312 VPS36Q86VN1 386 aa10.2□□□□□ -0.78
ARHGEF28-210ENST00000510312 OTUD6BQ8N6M0 293 aa10.2□□□□□ -0.78
ARHGEF28-210ENST00000510312 NLRP3Q96P20 1036 aa10.2□□□□□ -0.78
ARHGEF28-210ENST00000510312 METAP2P50579 478 aaKnown RBP eCLIP10.2□□□□□ -0.78
ARHGEF28-210ENST00000510312 TAF12Q16514 161 aa10.2□□□□□ -0.78
ARHGEF28-210ENST00000510312 ARL1P40616 181 aaPredicted RBP10.2□□□□□ -0.78
ARHGEF28-210ENST00000510312 CADPS2Q86UW7 1296 aa10.2□□□□□ -0.78
ARHGEF28-210ENST00000510312 CCDC12Q8WUD4 166 aaPredicted RBP10.2□□□□□ -0.78
ARHGEF28-210ENST00000510312 ZNF804AQ7Z570 1209 aa10.2□□□□□ -0.78
ARHGEF28-210ENST00000510312 HOMEZQ8IX15 550 aa10.2□□□□□ -0.78
ARHGEF28-210ENST00000510312 XRCC6P12956 609 aaKnown RBP eCLIP10.2□□□□□ -0.78
ARHGEF28-210ENST00000510312 IFFO1Q0D2I5 559 aa10.2□□□□□ -0.78
ARHGEF28-210ENST00000510312 CCDC174Q6PII3 467 aa10.2□□□□□ -0.78
ARHGEF28-210ENST00000510312 LRSAM1Q6UWE0 723 aa10.2□□□□□ -0.78
ARHGEF28-210ENST00000510312 JDP2Q8WYK2 163 aa10.2□□□□□ -0.78
ARHGEF28-210ENST00000510312 LMTK3Q96Q04 1460 aa10.19□□□□□ -0.78
ARHGEF28-210ENST00000510312 TMEM110-MUSTN1A8MSY1 372 aa10.19□□□□□ -0.78
ARHGEF28-210ENST00000510312 NOLC1Q14978 699 aaKnown RBP eCLIP10.19□□□□□ -0.78
ARHGEF28-210ENST00000510312 DDX12PQ92771 950 aa10.19□□□□□ -0.78
ARHGEF28-210ENST00000510312 SH2B1Q9NRF2 756 aaPredicted RBP10.19□□□□□ -0.78
ARHGEF28-210ENST00000510312 MKRN1Q9UHC7 482 aaKnown RBP10.19□□□□□ -0.78
ARHGEF28-210ENST00000510312 SAP30BPQ9UHR5 308 aaKnown RBP10.19□□□□□ -0.78
ARHGEF28-210ENST00000510312 ATP2B3Q16720 1220 aa10.19□□□□□ -0.78
ARHGEF28-210ENST00000510312 CEP135Q66GS9 1140 aa10.19□□□□□ -0.78
ARHGEF28-210ENST00000510312 ADGRF5Q8IZF2 1346 aa10.19□□□□□ -0.78
ARHGEF28-210ENST00000510312 STAMBPO95630 424 aa10.19□□□□□ -0.78
ARHGEF28-210ENST00000510312 MIPOL1Q8TD10 442 aa10.19□□□□□ -0.78
ARHGEF28-210ENST00000510312 BRD2P25440 801 aaKnown RBP10.19□□□□□ -0.78
ARHGEF28-210ENST00000510312 B4GALNT4Q76KP1 1039 aa10.19□□□□□ -0.78
ARHGEF28-210ENST00000510312 DZIP3Q86Y13 1208 aaKnown RBP10.19□□□□□ -0.78
ARHGEF28-210ENST00000510312 TFIP11Q9UBB9 837 aaKnown RBP10.19□□□□□ -0.78
ARHGEF28-210ENST00000510312 AMPD3Q01432 767 aa10.19□□□□□ -0.78
ARHGEF28-210ENST00000510312 CCDC184Q52MB2 194 aa10.19□□□□□ -0.78
ARHGEF28-210ENST00000510312 DNAJC21Q5F1R6 531 aaKnown RBP10.19□□□□□ -0.78
ARHGEF28-210ENST00000510312 STXBP4Q6ZWJ1 553 aa10.19□□□□□ -0.78
ARHGEF28-210ENST00000510312 GJC1P36383 396 aa10.19□□□□□ -0.78
ARHGEF28-210ENST00000510312 IDI1Q13907 227 aa10.19□□□□□ -0.78
ARHGEF28-210ENST00000510312 LRRC59Q96AG4 307 aaKnown RBP10.19□□□□□ -0.78
ARHGEF28-210ENST00000510312 PI4KAP2A4QPH2 592 aa10.18□□□□□ -0.78
ARHGEF28-210ENST00000510312 CETN1Q12798 172 aa10.18□□□□□ -0.78
ARHGEF28-210ENST00000510312 PI4KAP1Q8N8J0 262 aa10.18□□□□□ -0.78
ARHGEF28-210ENST00000510312 TBCAO75347 108 aaKnown RBP10.18□□□□□ -0.78
ARHGEF28-210ENST00000510312 SLFN5Q08AF3 891 aa10.18□□□□□ -0.78
ARHGEF28-210ENST00000510312 C6orf163Q5TEZ5 329 aa10.18□□□□□ -0.78
ARHGEF28-210ENST00000510312 ANKS4BQ8N8V4 417 aa10.18□□□□□ -0.78
ARHGEF28-210ENST00000510312 TOP1P11387 765 aaKnown RBP10.18□□□□□ -0.78
ARHGEF28-210ENST00000510312 IARSP41252 1262 aaKnown RBP10.18□□□□□ -0.78
ARHGEF28-210ENST00000510312 SNW1Q13573 536 aaKnown RBP10.18□□□□□ -0.78
ARHGEF28-210ENST00000510312 TUBB2AQ13885 445 aa10.18□□□□□ -0.78
ARHGEF28-210ENST00000510312 SMARCC2Q8TAQ2 1214 aa10.18□□□□□ -0.78
ARHGEF28-210ENST00000510312 TUBB2BQ9BVA1 445 aa10.18□□□□□ -0.78
ARHGEF28-210ENST00000510312 CHPF2Q9P2E5 772 aa10.18□□□□□ -0.78
ARHGEF28-210ENST00000510312 SERPINA10Q9UK55 444 aa10.18□□□□□ -0.78
ARHGEF28-210ENST00000510312 TOPBP1Q92547 1522 aa10.18□□□□□ -0.78
ARHGEF28-210ENST00000510312 CKAP4Q07065 602 aaKnown RBP10.18□□□□□ -0.78
ARHGEF28-210ENST00000510312 FSIP1Q8NA03 581 aa10.18□□□□□ -0.78
ARHGEF28-210ENST00000510312 EVI5LQ96CN4 794 aa10.18□□□□□ -0.78
ARHGEF28-210ENST00000510312 CLIP2Q9UDT6 1046 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms