RNA–Protein interactions for RNA: ENST00000509415.5

CALCOCO2-214, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-214ENST00000509415 CFAP44Q96MT7 982 aa13.82□□□□□ -0.2
CALCOCO2-214ENST00000509415 PRKRIP1Q9H875 184 aaPredicted RBP13.82□□□□□ -0.2
CALCOCO2-214ENST00000509415 DBF4Q9UBU7 674 aaPredicted RBP13.82□□□□□ -0.2
CALCOCO2-214ENST00000509415 DUOX1Q9NRD9 1551 aa13.81□□□□□ -0.2
CALCOCO2-214ENST00000509415 EPS15P42566 896 aa13.81□□□□□ -0.2
CALCOCO2-214ENST00000509415 GRAPQ13588 217 aa13.81□□□□□ -0.2
CALCOCO2-214ENST00000509415 DPP8Q6V1X1 898 aaPredicted RBP13.81□□□□□ -0.2
CALCOCO2-214ENST00000509415 ANKRD13DQ6ZTN6 518 aa13.81□□□□□ -0.2
CALCOCO2-214ENST00000509415 GRAPLQ8TC17 118 aaPredicted RBP13.81□□□□□ -0.2
CALCOCO2-214ENST00000509415 MYH3P11055 1940 aa13.81□□□□□ -0.2
CALCOCO2-214ENST00000509415 VEGFBP49765 207 aa13.8□□□□□ -0.2
CALCOCO2-214ENST00000509415 DUSP27Q5VZP5 1158 aa13.8□□□□□ -0.2
CALCOCO2-214ENST00000509415 USP50Q70EL3 339 aaPredicted RBP13.8□□□□□ -0.2
CALCOCO2-214ENST00000509415 TMC4Q7Z404 712 aa13.8□□□□□ -0.2
CALCOCO2-214ENST00000509415 MPNDQ8N594 471 aa13.8□□□□□ -0.2
CALCOCO2-214ENST00000509415 ISCA1Q9BUE6 129 aa13.8□□□□□ -0.2
CALCOCO2-214ENST00000509415 HYPKQ9NX55 129 aa13.8□□□□□ -0.2
CALCOCO2-214ENST00000509415 ZNRF3Q9ULT6 936 aa13.8□□□□□ -0.2
CALCOCO2-214ENST00000509415 RASSF10A6NK89 507 aa13.79□□□□□ -0.2
CALCOCO2-214ENST00000509415 ZNF853P0CG23 659 aa13.79□□□□□ -0.2
CALCOCO2-214ENST00000509415 KIAA2012Q0VF49 1180 aa13.79□□□□□ -0.2
CALCOCO2-214ENST00000509415 MBIPQ9NS73 344 aa13.79□□□□□ -0.2
CALCOCO2-214ENST00000509415 SUPT16HQ9Y5B9 1047 aaKnown RBP13.79□□□□□ -0.2
CALCOCO2-214ENST00000509415 CACNA1FO60840 1977 aa13.79□□□□□ -0.2
CALCOCO2-214ENST00000509415 THSD7BQ9C0I4 1608 aa13.79□□□□□ -0.2
CALCOCO2-214ENST00000509415 KCNA4P22459 653 aa13.78□□□□□ -0.2
CALCOCO2-214ENST00000509415 CXCL9Q07325 125 aa13.78□□□□□ -0.2
CALCOCO2-214ENST00000509415 ZNF428Q96B54 188 aa13.78□□□□□ -0.2
CALCOCO2-214ENST00000509415 ADARB2Q9NS39 739 aaKnown RBP13.78□□□□□ -0.2
CALCOCO2-214ENST00000509415 GPRC5DQ9NZD1 345 aa13.78□□□□□ -0.2
CALCOCO2-214ENST00000509415 COL4A1P02462 1669 aa13.78□□□□□ -0.2
CALCOCO2-214ENST00000509415 PSME4Q14997 1843 aa13.78□□□□□ -0.2
CALCOCO2-214ENST00000509415 ATP5J2-PTCD1G3V325 749 aa13.77□□□□□ -0.21
CALCOCO2-214ENST00000509415 APAF1O14727 1248 aa13.77□□□□□ -0.21
CALCOCO2-214ENST00000509415 GNAI1P63096 354 aa13.77□□□□□ -0.21
CALCOCO2-214ENST00000509415 CALD1Q05682 793 aaKnown RBP13.77□□□□□ -0.21
CALCOCO2-214ENST00000509415 TRIM28Q13263 835 aaKnown RBP13.77□□□□□ -0.21
CALCOCO2-214ENST00000509415 SF3B3Q15393 1217 aaKnown RBP13.77□□□□□ -0.21
CALCOCO2-214ENST00000509415 DEFB115Q30KQ5 88 aa13.77□□□□□ -0.21
CALCOCO2-214ENST00000509415 CIAPIN1Q6FI81 312 aa13.77□□□□□ -0.21
CALCOCO2-214ENST00000509415 FAM89AQ96GI7 184 aa13.77□□□□□ -0.21
CALCOCO2-214ENST00000509415 CDHR2Q9BYE9 1310 aa13.77□□□□□ -0.21
CALCOCO2-214ENST00000509415 IFT57Q9NWB7 429 aa13.77□□□□□ -0.21
CALCOCO2-214ENST00000509415 SCN9AQ15858 1988 aa13.76□□□□□ -0.21
CALCOCO2-214ENST00000509415 FOXN1O15353 648 aa13.76□□□□□ -0.21
CALCOCO2-214ENST00000509415 GMPSP49915 693 aaPredicted RBP13.76□□□□□ -0.21
CALCOCO2-214ENST00000509415 TNIP1Q15025 636 aa13.76□□□□□ -0.21
CALCOCO2-214ENST00000509415 AIDAQ96BJ3 306 aa13.76□□□□□ -0.21
CALCOCO2-214ENST00000509415 ABT1Q9ULW3 272 aaKnown RBP13.76□□□□□ -0.21
CALCOCO2-214ENST00000509415 SPEF2Q9C093 1822 aa13.76□□□□□ -0.21
CALCOCO2-214ENST00000509415 CAPN15O75808 1086 aa13.75□□□□□ -0.21
CALCOCO2-214ENST00000509415 GOLGA2Q08379 1002 aa13.75□□□□□ -0.21
CALCOCO2-214ENST00000509415 CELF1Q92879 486 aaKnown RBP13.75□□□□□ -0.21
CALCOCO2-214ENST00000509415 WBP1LQ9NX94 342 aa13.75□□□□□ -0.21
CALCOCO2-214ENST00000509415 WDR33Q9C0J8 1336 aaKnown RBP13.74□□□□□ -0.21
CALCOCO2-214ENST00000509415 IRS4O14654 1257 aaPredicted RBP13.74□□□□□ -0.21
CALCOCO2-214ENST00000509415 RAD17O75943 681 aa13.74□□□□□ -0.21
CALCOCO2-214ENST00000509415 CTCFP49711 727 aaPredicted RBP13.74□□□□□ -0.21
CALCOCO2-214ENST00000509415 FMR1Q06787 632 aaKnown RBP eCLIP13.74□□□□□ -0.21
CALCOCO2-214ENST00000509415 RIC3Q7Z5B4 369 aa13.74□□□□□ -0.21
CALCOCO2-214ENST00000509415 YTHDC1Q96MU7 727 aaKnown RBP13.74□□□□□ -0.21
CALCOCO2-214ENST00000509415 BCL2L13Q9BXK5 485 aa13.74□□□□□ -0.21
CALCOCO2-214ENST00000509415 PRDM10Q9NQV6 1147 aa13.74□□□□□ -0.21
CALCOCO2-214ENST00000509415 YDJCA8MPS7 323 aa13.73□□□□□ -0.21
CALCOCO2-214ENST00000509415 TRAF5O00463 557 aa13.73□□□□□ -0.21
CALCOCO2-214ENST00000509415 ELL2O00472 640 aaPredicted RBP13.73□□□□□ -0.21
CALCOCO2-214ENST00000509415 WASHC4Q2M389 1173 aa13.73□□□□□ -0.21
CALCOCO2-214ENST00000509415 RTL5Q5HYW3 569 aaPredicted RBP13.73□□□□□ -0.21
CALCOCO2-214ENST00000509415 CST9Q5W186 159 aa13.73□□□□□ -0.21
CALCOCO2-214ENST00000509415 ZBTB38Q8NAP3 1195 aaPredicted RBP13.73□□□□□ -0.21
CALCOCO2-214ENST00000509415 PHAXQ9H814 394 aaKnown RBP13.73□□□□□ -0.21
CALCOCO2-214ENST00000509415 PGAP2Q9UHJ9 254 aa13.73□□□□□ -0.21
CALCOCO2-214ENST00000509415 NSFL1CQ9UNZ2 370 aaKnown RBP13.73□□□□□ -0.21
CALCOCO2-214ENST00000509415 HSP90B1P14625 803 aaKnown RBP13.72□□□□□ -0.21
CALCOCO2-214ENST00000509415 ZC3H15Q8WU90 426 aaKnown RBP13.72□□□□□ -0.21
CALCOCO2-214ENST00000509415 CHMP4AQ9BY43 222 aa13.72□□□□□ -0.21
CALCOCO2-214ENST00000509415 TSHZ2Q9NRE2 1034 aa13.72□□□□□ -0.21
CALCOCO2-214ENST00000509415 C6orf229H3BNL8 230 aa13.71□□□□□ -0.21
CALCOCO2-214ENST00000509415 ECE1P42892 770 aa13.71□□□□□ -0.21
CALCOCO2-214ENST00000509415 RPS8P62241 208 aaKnown RBP13.71□□□□□ -0.21
CALCOCO2-214ENST00000509415 GPSM2P81274 684 aa13.71□□□□□ -0.21
CALCOCO2-214ENST00000509415 MAP2K1Q02750 393 aaPredicted RBP13.71□□□□□ -0.21
CALCOCO2-214ENST00000509415 C8orf58Q8NAV2 365 aa13.71□□□□□ -0.21
CALCOCO2-214ENST00000509415 CCDC191Q8NCU4 936 aa13.71□□□□□ -0.21
CALCOCO2-214ENST00000509415 DPF2Q92785 391 aa13.71□□□□□ -0.21
CALCOCO2-214ENST00000509415 CAPNS2Q96L46 248 aa13.71□□□□□ -0.21
CALCOCO2-214ENST00000509415 EYA3Q99504 573 aa13.71□□□□□ -0.21
CALCOCO2-214ENST00000509415 MYD88Q99836 296 aa13.71□□□□□ -0.21
CALCOCO2-214ENST00000509415 BCL11AQ9H165 835 aa13.71□□□□□ -0.21
CALCOCO2-214ENST00000509415 DBNDD1Q9H9R9 158 aa13.71□□□□□ -0.21
CALCOCO2-214ENST00000509415 POLLQ9UGP5 575 aa13.71□□□□□ -0.21
CALCOCO2-214ENST00000509415 CNOT7Q9UIV1 285 aaKnown RBP13.71□□□□□ -0.21
CALCOCO2-214ENST00000509415 TLL2Q9Y6L7 1015 aa13.71□□□□□ -0.21
CALCOCO2-214ENST00000509415 H7C1D1 291 aa13.7□□□□□ -0.22
CALCOCO2-214ENST00000509415 PSMD14O00487 310 aa13.7□□□□□ -0.22
CALCOCO2-214ENST00000509415 RIMBP2O15034 1052 aa13.7□□□□□ -0.22
CALCOCO2-214ENST00000509415 DDX58O95786 925 aaKnown RBP13.7□□□□□ -0.22
CALCOCO2-214ENST00000509415 PCCAP05165 728 aaPredicted RBP13.7□□□□□ -0.22
CALCOCO2-214ENST00000509415 HIRAP54198 1017 aaPredicted RBP13.7□□□□□ -0.22
CALCOCO2-214ENST00000509415 CCDC30Q5VVM6 783 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms