RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 PSMD1Q99460 953 aa21.56■■□□□ 1.04
CLDND1-219ENST00000508659 ZNF277Q9NRM2 450 aaPredicted RBP21.56■■□□□ 1.04
CLDND1-219ENST00000508659 CT47B1P0C2W7 299 aaPredicted RBP21.55■■□□□ 1.04
CLDND1-219ENST00000508659 UBE3BQ7Z3V4 1068 aa21.55■■□□□ 1.04
CLDND1-219ENST00000508659 TMC4Q7Z404 712 aa21.55■■□□□ 1.04
CLDND1-219ENST00000508659 SLC51AQ86UW1 340 aa21.55■■□□□ 1.04
CLDND1-219ENST00000508659 BCL2L13Q9BXK5 485 aa21.55■■□□□ 1.04
CLDND1-219ENST00000508659 CTSWP56202 376 aa21.54■■□□□ 1.04
CLDND1-219ENST00000508659 GCKRQ14397 625 aa21.54■■□□□ 1.04
CLDND1-219ENST00000508659 MRPL50Q8N5N7 158 aaKnown RBP21.54■■□□□ 1.04
CLDND1-219ENST00000508659 SSH1Q8WYL5 1049 aa21.54■■□□□ 1.04
CLDND1-219ENST00000508659 SMC4Q9NTJ3 1288 aa21.54■■□□□ 1.04
CLDND1-219ENST00000508659 IARSP41252 1262 aaKnown RBP21.53■■□□□ 1.04
CLDND1-219ENST00000508659 ALDH1L2Q3SY69 923 aa21.53■■□□□ 1.04
CLDND1-219ENST00000508659 CELF1Q92879 486 aaKnown RBP21.53■■□□□ 1.04
CLDND1-219ENST00000508659 PTPRCP08575 1304 aa21.53■■□□□ 1.04
CLDND1-219ENST00000508659 BEND3Q5T5X7 828 aa21.52■■□□□ 1.04
CLDND1-219ENST00000508659 SLC4A10Q6U841 1118 aa21.52■■□□□ 1.04
CLDND1-219ENST00000508659 SP8Q8IXZ3 490 aa21.52■■□□□ 1.04
CLDND1-219ENST00000508659 DPP8Q6V1X1 898 aaPredicted RBP21.51■■□□□ 1.03
CLDND1-219ENST00000508659 CCDC85AQ96PX6 553 aaPredicted RBP21.51■■□□□ 1.03
CLDND1-219ENST00000508659 NMRK2Q9NPI5 230 aa21.51■■□□□ 1.03
CLDND1-219ENST00000508659 LRRC37AA6NMS7 1700 aa21.51■■□□□ 1.03
CLDND1-219ENST00000508659 GLTPD2A6NH11 291 aa21.5■■□□□ 1.03
CLDND1-219ENST00000508659 H7C1W4 665 aa21.5■■□□□ 1.03
CLDND1-219ENST00000508659 DPY19L2Q6NUT2 758 aa21.5■■□□□ 1.03
CLDND1-219ENST00000508659 DICER1Q9UPY3 1922 aaKnown RBP21.49■■□□□ 1.03
CLDND1-219ENST00000508659 SUPT20HQ8NEM7 779 aa21.49■■□□□ 1.03
CLDND1-219ENST00000508659 JDP2Q8WYK2 163 aa21.49■■□□□ 1.03
CLDND1-219ENST00000508659 SRCIN1Q9C0H9 1055 aa21.49■■□□□ 1.03
CLDND1-219ENST00000508659 SEC31BQ9NQW1 1179 aa21.49■■□□□ 1.03
CLDND1-219ENST00000508659 COL4A1P02462 1669 aa21.49■■□□□ 1.03
CLDND1-219ENST00000508659 CCDC88AQ3V6T2 1871 aa21.49■■□□□ 1.03
CLDND1-219ENST00000508659 KIF3CO14782 793 aa21.48■■□□□ 1.03
CLDND1-219ENST00000508659 ALDH1L1O75891 902 aa21.48■■□□□ 1.03
CLDND1-219ENST00000508659 RPS8P62241 208 aaKnown RBP21.48■■□□□ 1.03
CLDND1-219ENST00000508659 LARGE2Q8N3Y3 721 aa21.48■■□□□ 1.03
CLDND1-219ENST00000508659 MPNDQ8N594 471 aa21.48■■□□□ 1.03
CLDND1-219ENST00000508659 CDC5LQ99459 802 aaKnown RBP21.48■■□□□ 1.03
CLDND1-219ENST00000508659 ZBED9Q6R2W3 1325 aa21.48■■□□□ 1.03
CLDND1-219ENST00000508659 PPIP5K2O43314 1243 aa21.47■■□□□ 1.03
CLDND1-219ENST00000508659 TTLL11Q8NHH1 800 aa21.47■■□□□ 1.03
CLDND1-219ENST00000508659 PLA2G12BQ9BX93 195 aa21.47■■□□□ 1.03
CLDND1-219ENST00000508659 RTL9Q8NET4 1388 aa21.47■■□□□ 1.03
CLDND1-219ENST00000508659 DUOX1Q9NRD9 1551 aa21.46■■□□□ 1.03
CLDND1-219ENST00000508659 GRM8O00222 908 aa21.46■■□□□ 1.03
CLDND1-219ENST00000508659 CASP7P55210 303 aa21.46■■□□□ 1.03
CLDND1-219ENST00000508659 C1QTNF8P60827 252 aa21.46■■□□□ 1.03
CLDND1-219ENST00000508659 ANKRD18AQ8IVF6 992 aa21.46■■□□□ 1.03
CLDND1-219ENST00000508659 C16orf71Q8IYS4 520 aaPredicted RBP21.46■■□□□ 1.03
CLDND1-219ENST00000508659 RTFDC1Q9BY42 306 aaPredicted RBP21.46■■□□□ 1.03
CLDND1-219ENST00000508659 GREM2Q9H772 168 aa21.46■■□□□ 1.03
CLDND1-219ENST00000508659 C9orf78Q9NZ63 289 aaPredicted RBP21.46■■□□□ 1.03
CLDND1-219ENST00000508659 AOC3Q16853 763 aa21.45■■□□□ 1.02
CLDND1-219ENST00000508659 NIM1KQ8IY84 436 aa21.45■■□□□ 1.02
CLDND1-219ENST00000508659 ZNF541Q9H0D2 1346 aa21.45■■□□□ 1.02
CLDND1-219ENST00000508659 TAF1P21675 1872 aa21.45■■□□□ 1.02
CLDND1-219ENST00000508659 MYH3P11055 1940 aa21.45■■□□□ 1.02
CLDND1-219ENST00000508659 COL4A5P29400 1685 aa21.44■■□□□ 1.02
CLDND1-219ENST00000508659 FAM161AQ3B820 660 aa21.44■■□□□ 1.02
CLDND1-219ENST00000508659 VPS33BQ9H267 617 aa21.44■■□□□ 1.02
CLDND1-219ENST00000508659 RRAGCQ9HB90 399 aa21.44■■□□□ 1.02
CLDND1-219ENST00000508659 NSFL1CQ9UNZ2 370 aaKnown RBP21.44■■□□□ 1.02
CLDND1-219ENST00000508659 KIF16BQ96L93 1317 aa21.44■■□□□ 1.02
CLDND1-219ENST00000508659 WDR90Q96KV7 1748 aa21.43■■□□□ 1.02
CLDND1-219ENST00000508659 FZD9O00144 591 aa21.42■■□□□ 1.02
CLDND1-219ENST00000508659 DDNO94850 711 aaPredicted RBP21.42■■□□□ 1.02
CLDND1-219ENST00000508659 RARSP54136 660 aaKnown RBP21.42■■□□□ 1.02
CLDND1-219ENST00000508659 EIF6P56537 245 aaKnown RBP21.42■■□□□ 1.02
CLDND1-219ENST00000508659 GPSM2P81274 684 aa21.42■■□□□ 1.02
CLDND1-219ENST00000508659 LTBP1Q14766 1721 aa21.41■■□□□ 1.02
CLDND1-219ENST00000508659 VEGFAP15692 232 aaPredicted RBP21.41■■□□□ 1.02
CLDND1-219ENST00000508659 ITGA6P23229 1130 aa21.41■■□□□ 1.02
CLDND1-219ENST00000508659 IGHMBP2P38935 993 aaKnown RBP21.41■■□□□ 1.02
CLDND1-219ENST00000508659 KIAA2012Q0VF49 1180 aa21.41■■□□□ 1.02
CLDND1-219ENST00000508659 ANKIB1Q9P2G1 1089 aa21.41■■□□□ 1.02
CLDND1-219ENST00000508659 CHMP3Q9Y3E7 222 aa21.41■■□□□ 1.02
CLDND1-219ENST00000508659 TOMM70O94826 608 aa21.4■■□□□ 1.02
CLDND1-219ENST00000508659 BRPF1P55201 1214 aaPredicted RBP21.4■■□□□ 1.02
CLDND1-219ENST00000508659 API5Q9BZZ5 524 aaKnown RBP21.4■■□□□ 1.02
CLDND1-219ENST00000508659 NOB1Q9ULX3 412 aaKnown RBP21.4■■□□□ 1.02
CLDND1-219ENST00000508659 C6orf229H3BNL8 230 aa21.39■■□□□ 1.01
CLDND1-219ENST00000508659 UFL1O94874 794 aa21.39■■□□□ 1.01
CLDND1-219ENST00000508659 CSF1RP07333 972 aa21.39■■□□□ 1.01
CLDND1-219ENST00000508659 GPC2Q8N158 579 aa21.39■■□□□ 1.01
CLDND1-219ENST00000508659 EYA3Q99504 573 aa21.39■■□□□ 1.01
CLDND1-219ENST00000508659 PODXL2Q9NZ53 605 aa21.39■■□□□ 1.01
CLDND1-219ENST00000508659 XDHP47989 1333 aa21.38■■□□□ 1.01
CLDND1-219ENST00000508659 ANKRD18BA2A2Z9 1011 aa21.38■■□□□ 1.01
CLDND1-219ENST00000508659 IQCA1LA6NCM1 817 aa21.38■■□□□ 1.01
CLDND1-219ENST00000508659 FOXO4P98177 505 aa21.38■■□□□ 1.01
CLDND1-219ENST00000508659 WASHC4Q2M389 1173 aa21.38■■□□□ 1.01
CLDND1-219ENST00000508659 L3MBTL3Q96JM7 780 aaPredicted RBP21.38■■□□□ 1.01
CLDND1-219ENST00000508659 BSDC1Q9NW68 430 aaPredicted RBP21.38■■□□□ 1.01
CLDND1-219ENST00000508659 GGA1Q9UJY5 639 aa21.38■■□□□ 1.01
CLDND1-219ENST00000508659 UTYO14607 1347 aa21.37■■□□□ 1.01
CLDND1-219ENST00000508659 CCT4P50991 539 aaKnown RBP21.37■■□□□ 1.01
CLDND1-219ENST00000508659 IFIT5Q13325 482 aaKnown RBP21.37■■□□□ 1.01
CLDND1-219ENST00000508659 TBC1D16Q8TBP0 767 aa21.37■■□□□ 1.01
CLDND1-219ENST00000508659 MPHOSPH8Q99549 860 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms