RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 EME2A4GXA9 379 aaPredicted RBP12.53□□□□□ -0.4
PDLIM5-210ENST00000508216 FESP07332 822 aa12.53□□□□□ -0.4
PDLIM5-210ENST00000508216 RHBDL3P58872 404 aa12.53□□□□□ -0.4
PDLIM5-210ENST00000508216 TAF7Q15545 349 aaPredicted RBP12.53□□□□□ -0.4
PDLIM5-210ENST00000508216 MFSD4BQ5TF39 518 aa12.53□□□□□ -0.4
PDLIM5-210ENST00000508216 CCDC181Q5TID7 509 aa12.53□□□□□ -0.4
PDLIM5-210ENST00000508216 IQCF2Q8IXL9 164 aa12.53□□□□□ -0.4
PDLIM5-210ENST00000508216 OR8K1Q8NGG5 319 aa12.53□□□□□ -0.4
PDLIM5-210ENST00000508216 EZH1Q92800 747 aaPredicted RBP12.53□□□□□ -0.4
PDLIM5-210ENST00000508216 RBM17Q96I25 401 aaKnown RBP12.53□□□□□ -0.4
PDLIM5-210ENST00000508216 FMNL2Q96PY5 1086 aa12.53□□□□□ -0.4
PDLIM5-210ENST00000508216 COLQQ9Y215 455 aaPredicted RBP12.53□□□□□ -0.4
PDLIM5-210ENST00000508216 ANKRD50Q9ULJ7 1429 aa12.53□□□□□ -0.4
PDLIM5-210ENST00000508216 NKTRP30414 1462 aaKnown RBP12.52□□□□□ -0.4
PDLIM5-210ENST00000508216 EXOC5O00471 708 aa12.52□□□□□ -0.41
PDLIM5-210ENST00000508216 POLR3GO15318 223 aaPredicted RBP12.52□□□□□ -0.41
PDLIM5-210ENST00000508216 GCKP35557 465 aa12.52□□□□□ -0.41
PDLIM5-210ENST00000508216 NUTM2GQ5VZR2 741 aa12.52□□□□□ -0.41
PDLIM5-210ENST00000508216 C16orf45Q96MC5 204 aaPredicted RBP12.52□□□□□ -0.41
PDLIM5-210ENST00000508216 MYO6Q9UM54 1294 aa12.52□□□□□ -0.41
PDLIM5-210ENST00000508216 PRPF40AO75400 957 aaKnown RBP12.51□□□□□ -0.41
PDLIM5-210ENST00000508216 PPP1R37O75864 691 aa12.51□□□□□ -0.41
PDLIM5-210ENST00000508216 VCAM1P19320 739 aa12.51□□□□□ -0.41
PDLIM5-210ENST00000508216 CCDC93Q567U6 631 aa12.51□□□□□ -0.41
PDLIM5-210ENST00000508216 GJC2Q5T442 439 aaPredicted RBP12.51□□□□□ -0.41
PDLIM5-210ENST00000508216 RBM26Q5T8P6 1007 aaKnown RBP12.51□□□□□ -0.41
PDLIM5-210ENST00000508216 TAX1BP1Q86VP1 789 aa12.51□□□□□ -0.41
PDLIM5-210ENST00000508216 GAS2L2Q8NHY3 880 aa12.51□□□□□ -0.41
PDLIM5-210ENST00000508216 ZKSCAN4Q969J2 545 aaPredicted RBP12.51□□□□□ -0.41
PDLIM5-210ENST00000508216 XAGE2Q96GT9 111 aa12.51□□□□□ -0.41
PDLIM5-210ENST00000508216 CFAP53Q96M91 514 aa12.51□□□□□ -0.41
PDLIM5-210ENST00000508216 JPH2Q9BR39 696 aaPredicted RBP12.51□□□□□ -0.41
PDLIM5-210ENST00000508216 RGL1Q9NZL6 768 aa12.51□□□□□ -0.41
PDLIM5-210ENST00000508216 GCC2Q8IWJ2 1684 aa12.51□□□□□ -0.41
PDLIM5-210ENST00000508216 TOP2AP11388 1531 aaKnown RBP12.51□□□□□ -0.41
PDLIM5-210ENST00000508216 MROH2BQ7Z745 1585 aa12.51□□□□□ -0.41
PDLIM5-210ENST00000508216 TESPA1A2RU30 521 aaPredicted RBP12.51□□□□□ -0.41
PDLIM5-210ENST00000508216 POTEFA5A3E0 1075 aa12.51□□□□□ -0.41
PDLIM5-210ENST00000508216 ERLIN1O75477 346 aa12.51□□□□□ -0.41
PDLIM5-210ENST00000508216 TBC1D8O95759 1140 aa12.51□□□□□ -0.41
PDLIM5-210ENST00000508216 CCDC158Q5M9N0 1113 aa12.51□□□□□ -0.41
PDLIM5-210ENST00000508216 TLDC1Q6P9B6 456 aa12.51□□□□□ -0.41
PDLIM5-210ENST00000508216 IQCA1Q86XH1 822 aa12.51□□□□□ -0.41
PDLIM5-210ENST00000508216 CCDC125Q86Z20 511 aa12.51□□□□□ -0.41
PDLIM5-210ENST00000508216 FAM81AQ8TBF8 368 aa12.51□□□□□ -0.41
PDLIM5-210ENST00000508216 PARD3BQ8TEW8 1205 aa12.51□□□□□ -0.41
PDLIM5-210ENST00000508216 CCDC102AQ96A19 550 aa12.51□□□□□ -0.41
PDLIM5-210ENST00000508216 OSBPL9Q96SU4 736 aa12.51□□□□□ -0.41
PDLIM5-210ENST00000508216 PDZRN3Q9UPQ7 1066 aa12.51□□□□□ -0.41
PDLIM5-210ENST00000508216 THRAP3Q9Y2W1 955 aaKnown RBP12.51□□□□□ -0.41
PDLIM5-210ENST00000508216 MYL1P05976 194 aa12.5□□□□□ -0.41
PDLIM5-210ENST00000508216 ZNF24P17028 368 aa12.5□□□□□ -0.41
PDLIM5-210ENST00000508216 TPP2P29144 1249 aaPredicted RBP12.5□□□□□ -0.41
PDLIM5-210ENST00000508216 DBN1Q16643 649 aa12.5□□□□□ -0.41
PDLIM5-210ENST00000508216 FAM200AQ8TCP9 573 aa12.5□□□□□ -0.41
PDLIM5-210ENST00000508216 ZFAND2BQ8WV99 257 aa12.5□□□□□ -0.41
PDLIM5-210ENST00000508216 DTNBP1Q96EV8 351 aa12.5□□□□□ -0.41
PDLIM5-210ENST00000508216 STK31Q9BXU1 1019 aa12.5□□□□□ -0.41
PDLIM5-210ENST00000508216 UNC45AQ9H3U1 944 aa12.5□□□□□ -0.41
PDLIM5-210ENST00000508216 RWDD1Q9H446 243 aaPredicted RBP12.5□□□□□ -0.41
PDLIM5-210ENST00000508216 TMOD4Q9NZQ9 345 aa12.5□□□□□ -0.41
PDLIM5-210ENST00000508216 AK9Q5TCS8 1911 aa12.5□□□□□ -0.41
PDLIM5-210ENST00000508216 RPGRIP1LQ68CZ1 1315 aa12.5□□□□□ -0.41
PDLIM5-210ENST00000508216 RPRD2Q5VT52 1461 aaKnown RBP12.49□□□□□ -0.41
PDLIM5-210ENST00000508216 PRXQ9BXM0 1461 aa12.49□□□□□ -0.41
PDLIM5-210ENST00000508216 PYGLP06737 847 aa12.49□□□□□ -0.41
PDLIM5-210ENST00000508216 SF3B2Q13435 895 aaKnown RBP12.49□□□□□ -0.41
PDLIM5-210ENST00000508216 PLEKHO1Q53GL0 409 aaPredicted RBP12.49□□□□□ -0.41
PDLIM5-210ENST00000508216 TMX3Q96JJ7 454 aa12.49□□□□□ -0.41
PDLIM5-210ENST00000508216 YIPF2Q9BWQ6 316 aa12.49□□□□□ -0.41
PDLIM5-210ENST00000508216 KIF14Q15058 1648 aa12.49□□□□□ -0.41
PDLIM5-210ENST00000508216 MAP3K5Q99683 1374 aa12.49□□□□□ -0.41
PDLIM5-210ENST00000508216 FAM135AQ9P2D6 1515 aa12.49□□□□□ -0.41
PDLIM5-210ENST00000508216 F8VZ95 297 aa12.48□□□□□ -0.41
PDLIM5-210ENST00000508216 ERC2O15083 957 aa12.48□□□□□ -0.41
PDLIM5-210ENST00000508216 KIF5CO60282 957 aa12.48□□□□□ -0.41
PDLIM5-210ENST00000508216 DPY19L2Q6NUT2 758 aa12.48□□□□□ -0.41
PDLIM5-210ENST00000508216 ATP6V0A4Q9HBG4 840 aa12.48□□□□□ -0.41
PDLIM5-210ENST00000508216 TMEM98Q9Y2Y6 226 aa12.48□□□□□ -0.41
PDLIM5-210ENST00000508216 ABCA10Q8WWZ4 1543 aa12.48□□□□□ -0.41
PDLIM5-210ENST00000508216 HARSP12081 509 aaKnown RBP12.48□□□□□ -0.41
PDLIM5-210ENST00000508216 CASTP20810 708 aaKnown RBP12.48□□□□□ -0.41
PDLIM5-210ENST00000508216 GJA8P48165 433 aa12.48□□□□□ -0.41
PDLIM5-210ENST00000508216 GCLCP48506 637 aaPredicted RBP12.48□□□□□ -0.41
PDLIM5-210ENST00000508216 LAMB3Q13751 1172 aa12.48□□□□□ -0.41
PDLIM5-210ENST00000508216 MYOCDQ8IZQ8 938 aa12.48□□□□□ -0.41
PDLIM5-210ENST00000508216 TMEM87AQ8NBN3 555 aa12.48□□□□□ -0.41
PDLIM5-210ENST00000508216 ORC3Q9UBD5 711 aaPredicted RBP12.48□□□□□ -0.41
PDLIM5-210ENST00000508216 ABCC2Q92887 1545 aa12.47□□□□□ -0.41
PDLIM5-210ENST00000508216 MAP2K7O14733 419 aa12.47□□□□□ -0.41
PDLIM5-210ENST00000508216 E2F6O75461 281 aa12.47□□□□□ -0.41
PDLIM5-210ENST00000508216 BRD1O95696 1058 aa12.47□□□□□ -0.41
PDLIM5-210ENST00000508216 SESN3P58005 492 aa12.47□□□□□ -0.41
PDLIM5-210ENST00000508216 CCDC183Q5T5S1 534 aa12.47□□□□□ -0.41
PDLIM5-210ENST00000508216 SFMBT2Q5VUG0 894 aa12.47□□□□□ -0.41
PDLIM5-210ENST00000508216 CWC27Q6UX04 472 aaKnown RBP12.47□□□□□ -0.41
PDLIM5-210ENST00000508216 CCDC50Q8IVM0 306 aa12.47□□□□□ -0.41
PDLIM5-210ENST00000508216 BHMTQ93088 406 aa12.47□□□□□ -0.41
PDLIM5-210ENST00000508216 KIF9Q9HAQ2 790 aa12.47□□□□□ -0.41
PDLIM5-210ENST00000508216 BARX2Q9UMQ3 279 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms