RNA–Protein interactions for RNA: ENST00000507996.5

KDM3B-204, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 3,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-204ENST00000507996 A0A1B0GUL7 405 aa7.25□□□□□ -1.25
KDM3B-204ENST00000507996 VAMP4O75379 141 aa7.25□□□□□ -1.25
KDM3B-204ENST00000507996 TNNT1P13805 278 aa7.25□□□□□ -1.25
KDM3B-204ENST00000507996 ATP2B1P20020 1258 aa7.25□□□□□ -1.25
KDM3B-204ENST00000507996 EIF2S2P20042 333 aaKnown RBP7.25□□□□□ -1.25
KDM3B-204ENST00000507996 TPM4P67936 248 aa7.25□□□□□ -1.25
KDM3B-204ENST00000507996 SYT10Q6XYQ8 523 aa7.25□□□□□ -1.25
KDM3B-204ENST00000507996 NYAP1Q6ZVC0 841 aa7.25□□□□□ -1.25
KDM3B-204ENST00000507996 SRLQ86TD4 932 aa7.25□□□□□ -1.25
KDM3B-204ENST00000507996 GOLGA6L1Q8N7Z2 621 aa7.25□□□□□ -1.25
KDM3B-204ENST00000507996 CRB1P82279 1406 aa7.25□□□□□ -1.25
KDM3B-204ENST00000507996 ZRANB2O95218 330 aaKnown RBP eCLIP7.25□□□□□ -1.25
KDM3B-204ENST00000507996 CPP00450 1065 aa7.25□□□□□ -1.25
KDM3B-204ENST00000507996 PROM2Q8N271 834 aa7.25□□□□□ -1.25
KDM3B-204ENST00000507996 BANK1Q8NDB2 785 aa7.25□□□□□ -1.25
KDM3B-204ENST00000507996 MNS1Q8NEH6 495 aa7.25□□□□□ -1.25
KDM3B-204ENST00000507996 GOLGA5Q8TBA6 731 aa7.25□□□□□ -1.25
KDM3B-204ENST00000507996 SYTL4Q96C24 671 aaPredicted RBP7.25□□□□□ -1.25
KDM3B-204ENST00000507996 CHMP4CQ96CF2 233 aa7.25□□□□□ -1.25
KDM3B-204ENST00000507996 MED4Q9NPJ6 270 aa7.25□□□□□ -1.25
KDM3B-204ENST00000507996 NOB1Q9ULX3 412 aaKnown RBP7.25□□□□□ -1.25
KDM3B-204ENST00000507996 ELP1O95163 1332 aa7.24□□□□□ -1.25
KDM3B-204ENST00000507996 KAT6BQ8WYB5 2073 aa7.24□□□□□ -1.25
KDM3B-204ENST00000507996 CDC25BP30305 580 aa7.24□□□□□ -1.25
KDM3B-204ENST00000507996 PLA2G4AP47712 749 aa7.24□□□□□ -1.25
KDM3B-204ENST00000507996 CABP4P57796 275 aa7.24□□□□□ -1.25
KDM3B-204ENST00000507996 EGFL6Q8IUX8 553 aa7.24□□□□□ -1.25
KDM3B-204ENST00000507996 EXOC5O00471 708 aa7.24□□□□□ -1.25
KDM3B-204ENST00000507996 RGL2O15211 777 aa7.24□□□□□ -1.25
KDM3B-204ENST00000507996 RPS6KA5O75582 802 aa7.24□□□□□ -1.25
KDM3B-204ENST00000507996 FAM98CQ17RN3 349 aaKnown RBP7.24□□□□□ -1.25
KDM3B-204ENST00000507996 FBXO18Q8NFZ0 1043 aa7.24□□□□□ -1.25
KDM3B-204ENST00000507996 ZBTB9Q96C00 473 aa7.24□□□□□ -1.25
KDM3B-204ENST00000507996 LNPKQ9C0E8 428 aa7.24□□□□□ -1.25
KDM3B-204ENST00000507996 USP21Q9UK80 565 aa7.24□□□□□ -1.25
KDM3B-204ENST00000507996 LMO7Q8WWI1 1683 aa7.23□□□□□ -1.25
KDM3B-204ENST00000507996 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.23□□□□□ -1.25
KDM3B-204ENST00000507996 HCLS1P14317 486 aaPredicted RBP7.23□□□□□ -1.25
KDM3B-204ENST00000507996 MAGEA9P43362 315 aa7.23□□□□□ -1.25
KDM3B-204ENST00000507996 CEP135Q66GS9 1140 aa7.23□□□□□ -1.25
KDM3B-204ENST00000507996 ST7Q9NRC1 585 aa7.23□□□□□ -1.25
KDM3B-204ENST00000507996 RAI14Q9P0K7 980 aa7.23□□□□□ -1.25
KDM3B-204ENST00000507996 JRKLQ9Y4A0 524 aa7.23□□□□□ -1.25
KDM3B-204ENST00000507996 PCDH11XQ9BZA7 1347 aa7.23□□□□□ -1.25
KDM3B-204ENST00000507996 PCDH11YQ9BZA8 1340 aa7.23□□□□□ -1.25
KDM3B-204ENST00000507996 KIF2AO00139 706 aaPredicted RBP7.23□□□□□ -1.25
KDM3B-204ENST00000507996 POLA2Q14181 598 aa7.23□□□□□ -1.25
KDM3B-204ENST00000507996 NAA30Q147X3 362 aaPredicted RBP7.23□□□□□ -1.25
KDM3B-204ENST00000507996 NOM1Q5C9Z4 860 aaKnown RBP7.23□□□□□ -1.25
KDM3B-204ENST00000507996 UNC5CLQ8IV45 518 aa7.23□□□□□ -1.25
KDM3B-204ENST00000507996 L2HGDHQ9H9P8 463 aa7.23□□□□□ -1.25
KDM3B-204ENST00000507996 NEMFO60524 1076 aa7.22□□□□□ -1.25
KDM3B-204ENST00000507996 PRR29P0C7W0 189 aa7.22□□□□□ -1.25
KDM3B-204ENST00000507996 PNMA6AP0CW24 399 aaPredicted RBP7.22□□□□□ -1.25
KDM3B-204ENST00000507996 UBE2HP62256 183 aa7.22□□□□□ -1.25
KDM3B-204ENST00000507996 GPS2Q13227 327 aa7.22□□□□□ -1.25
KDM3B-204ENST00000507996 INTS3Q68E01 1043 aaKnown RBP7.22□□□□□ -1.25
KDM3B-204ENST00000507996 KRBA2Q6ZNG9 492 aa7.22□□□□□ -1.25
KDM3B-204ENST00000507996 CCDC91Q7Z6B0 441 aa7.22□□□□□ -1.25
KDM3B-204ENST00000507996 PLA2G4DQ86XP0 818 aa7.22□□□□□ -1.25
KDM3B-204ENST00000507996 DCAF5Q96JK2 942 aa7.22□□□□□ -1.25
KDM3B-204ENST00000507996 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.22□□□□□ -1.253e-6■■□□□ 14.4
KDM3B-204ENST00000507996 ZNF215Q9UL58 517 aaPredicted RBP7.22□□□□□ -1.25
KDM3B-204ENST00000507996 COL14A1Q05707 1796 aaKnown RBP7.22□□□□□ -1.25
KDM3B-204ENST00000507996 FAM208AQ9UK61 1670 aaKnown RBP7.22□□□□□ -1.25
KDM3B-204ENST00000507996 NCAPD2Q15021 1401 aa7.22□□□□□ -1.25
KDM3B-204ENST00000507996 PRAMEF22A3QJZ6 481 aa7.22□□□□□ -1.25
KDM3B-204ENST00000507996 SLU7O95391 586 aaKnown RBP7.22□□□□□ -1.25
KDM3B-204ENST00000507996 GSPT1P15170 499 aaKnown RBP7.22□□□□□ -1.25
KDM3B-204ENST00000507996 MCCP23508 829 aa7.22□□□□□ -1.25
KDM3B-204ENST00000507996 DDB1Q16531 1140 aa7.22□□□□□ -1.25
KDM3B-204ENST00000507996 HSP90AB3PQ58FF7 597 aa7.22□□□□□ -1.25
KDM3B-204ENST00000507996 ZSCAN25Q6NSZ9 544 aa7.22□□□□□ -1.25
KDM3B-204ENST00000507996 USP48Q86UV5 1035 aa7.22□□□□□ -1.25
KDM3B-204ENST00000507996 TTC5Q8N0Z6 440 aa7.22□□□□□ -1.25
KDM3B-204ENST00000507996 CEP89Q96ST8 783 aa7.22□□□□□ -1.25
KDM3B-204ENST00000507996 SLC52A2Q9HAB3 445 aa7.22□□□□□ -1.25
KDM3B-204ENST00000507996 RRP15Q9Y3B9 282 aaKnown RBP7.22□□□□□ -1.25
KDM3B-204ENST00000507996 COL22A1Q8NFW1 1626 aaPredicted RBP7.22□□□□□ -1.25
KDM3B-204ENST00000507996 TCHHQ07283 1943 aa7.22□□□□□ -1.25
KDM3B-204ENST00000507996 OVOS2A0A0G2JMS6 1433 aa7.22□□□□□ -1.25
KDM3B-204ENST00000507996 RGS12O14924 1447 aa7.22□□□□□ -1.25
KDM3B-204ENST00000507996 GADD45BO75293 160 aaPredicted RBP7.22□□□□□ -1.25
KDM3B-204ENST00000507996 PTGS1P23219 599 aa7.22□□□□□ -1.25
KDM3B-204ENST00000507996 TRDNQ13061 729 aa7.22□□□□□ -1.25
KDM3B-204ENST00000507996 ZSCAN26Q16670 478 aa7.22□□□□□ -1.25
KDM3B-204ENST00000507996 ALDH1L2Q3SY69 923 aa7.22□□□□□ -1.25
KDM3B-204ENST00000507996 TTC31Q49AM3 519 aaPredicted RBP7.22□□□□□ -1.25
KDM3B-204ENST00000507996 ITPRIPQ8IWB1 547 aa7.22□□□□□ -1.25
KDM3B-204ENST00000507996 TMEM57Q8N5G2 664 aa7.22□□□□□ -1.25
KDM3B-204ENST00000507996 C16orf45Q96MC5 204 aaPredicted RBP7.22□□□□□ -1.25
KDM3B-204ENST00000507996 SPATA31A1Q5TZJ5 1347 aa7.22□□□□□ -1.25
KDM3B-204ENST00000507996 SPATA31A6Q5VVP1 1343 aa7.22□□□□□ -1.25
KDM3B-204ENST00000507996 WDR33Q9C0J8 1336 aaKnown RBP7.22□□□□□ -1.25
KDM3B-204ENST00000507996 CEMIPQ8WUJ3 1361 aa7.21□□□□□ -1.25
KDM3B-204ENST00000507996 ABCC6O95255 1503 aa7.21□□□□□ -1.25
KDM3B-204ENST00000507996 PTCD1O75127 700 aaKnown RBP7.21□□□□□ -1.25
KDM3B-204ENST00000507996 ANXA1P04083 346 aa7.21□□□□□ -1.25
KDM3B-204ENST00000507996 TUBB4AP04350 444 aa7.21□□□□□ -1.25
KDM3B-204ENST00000507996 TTC22Q5TAA0 569 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms