RNA–Protein interactions for RNA: ENST00000507855.5

CCDC30-212, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC30, Length 2,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-212ENST00000507855 ZBTB42B2RXF5 422 aa4.93□□□□□ -1.62
CCDC30-212ENST00000507855 UBAP1LF5GYI3 381 aa4.93□□□□□ -1.62
CCDC30-212ENST00000507855 H3BM21 787 aa4.93□□□□□ -1.62
CCDC30-212ENST00000507855 EREGO14944 169 aa4.93□□□□□ -1.62
CCDC30-212ENST00000507855 TNFRSF21O75509 655 aa4.93□□□□□ -1.62
CCDC30-212ENST00000507855 NFKB1P19838 968 aa4.93□□□□□ -1.62
CCDC30-212ENST00000507855 EHHADHQ08426 723 aa4.93□□□□□ -1.62
CCDC30-212ENST00000507855 HFE2Q6ZVN8 426 aa4.93□□□□□ -1.62
CCDC30-212ENST00000507855 BHMTQ93088 406 aa4.93□□□□□ -1.62
CCDC30-212ENST00000507855 IGFLR1Q9H665 355 aa4.93□□□□□ -1.62
CCDC30-212ENST00000507855 FAM157BP0CG42 384 aa4.92□□□□□ -1.62
CCDC30-212ENST00000507855 FGFR3P22607 806 aa4.92□□□□□ -1.62
CCDC30-212ENST00000507855 IRX6P78412 446 aaPredicted RBP4.92□□□□□ -1.62
CCDC30-212ENST00000507855 SPEM2Q0P670 501 aa4.92□□□□□ -1.62
CCDC30-212ENST00000507855 SAMD5Q5TGI4 173 aa4.92□□□□□ -1.62
CCDC30-212ENST00000507855 COL25A1Q9BXS0 654 aaPredicted RBP4.92□□□□□ -1.62
CCDC30-212ENST00000507855 ELP3Q9H9T3 547 aa4.92□□□□□ -1.62
CCDC30-212ENST00000507855 J3QW42 95 aa4.92□□□□□ -1.62
CCDC30-212ENST00000507855 EPS8L3Q8TE67 593 aaKnown RBP4.92□□□□□ -1.62
CCDC30-212ENST00000507855 GIPC2Q8TF65 315 aa4.92□□□□□ -1.62
CCDC30-212ENST00000507855 NSUN5Q96P11 429 aaKnown RBP4.92□□□□□ -1.62
CCDC30-212ENST00000507855 TERTO14746 1132 aaKnown RBP4.91□□□□□ -1.62
CCDC30-212ENST00000507855 NDUFB5O43674 189 aa4.91□□□□□ -1.62
CCDC30-212ENST00000507855 RBM10P98175 930 aaKnown RBP4.91□□□□□ -1.62
CCDC30-212ENST00000507855 KIAA1522Q9P206 1035 aaPredicted RBP4.91□□□□□ -1.62
CCDC30-212ENST00000507855 KCNH4Q9UQ05 1017 aa4.91□□□□□ -1.62
CCDC30-212ENST00000507855 EIF1AYO14602 144 aaKnown RBP4.91□□□□□ -1.62
CCDC30-212ENST00000507855 ZNF16P17020 682 aaPredicted RBP4.91□□□□□ -1.62
CCDC30-212ENST00000507855 ZNF438Q7Z4V0 828 aa4.91□□□□□ -1.62
CCDC30-212ENST00000507855 NANOS1Q8WY41 292 aaKnown RBP4.91□□□□□ -1.62
CCDC30-212ENST00000507855 PIK3R5Q8WYR1 880 aa4.91□□□□□ -1.62
CCDC30-212ENST00000507855 MARK1Q9P0L2 795 aa4.91□□□□□ -1.62
CCDC30-212ENST00000507855 ANKIB1Q9P2G1 1089 aa4.91□□□□□ -1.62
CCDC30-212ENST00000507855 NAGPAQ9UK23 515 aa4.91□□□□□ -1.62
CCDC30-212ENST00000507855 PATL2C9JE40 543 aaKnown RBP4.9□□□□□ -1.62
CCDC30-212ENST00000507855 RBM25P49756 843 aaKnown RBP4.9□□□□□ -1.62
CCDC30-212ENST00000507855 KCNQ4P56696 695 aa4.9□□□□□ -1.62
CCDC30-212ENST00000507855 FMR1Q06787 632 aaKnown RBP eCLIP4.9□□□□□ -1.62
CCDC30-212ENST00000507855 PEAR1Q5VY43 1037 aaPredicted RBP4.9□□□□□ -1.62
CCDC30-212ENST00000507855 WHAMMQ8TF30 809 aa4.9□□□□□ -1.62
CCDC30-212ENST00000507855 CNTNAP3BQ96NU0 1288 aa4.9□□□□□ -1.62
CCDC30-212ENST00000507855 CNTNAP3Q9BZ76 1288 aa4.9□□□□□ -1.62
CCDC30-212ENST00000507855 PNMA6FA0A0J9YX94 578 aa4.89□□□□□ -1.63
CCDC30-212ENST00000507855 METTL12A8MUP2 240 aa4.89□□□□□ -1.63
CCDC30-212ENST00000507855 H7C1W4 665 aa4.89□□□□□ -1.63
CCDC30-212ENST00000507855 GMPRP36959 345 aa4.89□□□□□ -1.63
CCDC30-212ENST00000507855 TBC1D8BQ0IIM8 1120 aa4.89□□□□□ -1.63
CCDC30-212ENST00000507855 SV2AQ7L0J3 742 aa4.89□□□□□ -1.63
CCDC30-212ENST00000507855 SYT9Q86SS6 491 aa4.89□□□□□ -1.63
CCDC30-212ENST00000507855 FCHSD1Q86WN1 690 aa4.89□□□□□ -1.63
CCDC30-212ENST00000507855 NEUROD1Q13562 356 aa4.89□□□□□ -1.63
CCDC30-212ENST00000507855 ALKBH2Q6NS38 261 aa4.89□□□□□ -1.63
CCDC30-212ENST00000507855 BCL2L13Q9BXK5 485 aa4.89□□□□□ -1.63
CCDC30-212ENST00000507855 ATXN7L1Q9ULK2 861 aaPredicted RBP4.89□□□□□ -1.63
CCDC30-212ENST00000507855 NEURL1BA8MQ27 555 aa4.88□□□□□ -1.63
CCDC30-212ENST00000507855 RARAP10276 462 aa4.88□□□□□ -1.63
CCDC30-212ENST00000507855 CDK11BP21127 795 aaKnown RBP4.88□□□□□ -1.63
CCDC30-212ENST00000507855 ZEB1P37275 1124 aaPredicted RBP4.88□□□□□ -1.63
CCDC30-212ENST00000507855 LDLRAD1Q5T700 205 aa4.88□□□□□ -1.63
CCDC30-212ENST00000507855 C8orf86Q6ZUL3 223 aa4.88□□□□□ -1.63
CCDC30-212ENST00000507855 NPHS2Q9NP85 383 aa4.88□□□□□ -1.63
CCDC30-212ENST00000507855 CDK11AQ9UQ88 783 aaPredicted RBP4.88□□□□□ -1.63
CCDC30-212ENST00000507855 GPC6Q9Y625 555 aaPredicted RBP4.88□□□□□ -1.63
CCDC30-212ENST00000507855 CCINQ13939 588 aa4.88□□□□□ -1.63
CCDC30-212ENST00000507855 DUSP9Q99956 384 aaKnown RBP4.88□□□□□ -1.63
CCDC30-212ENST00000507855 MX2P20592 715 aa4.87□□□□□ -1.63
CCDC30-212ENST00000507855 ATP11AP98196 1134 aa4.87□□□□□ -1.63
CCDC30-212ENST00000507855 PLCB3Q01970 1234 aa4.87□□□□□ -1.63
CCDC30-212ENST00000507855 FIGNL1Q6PIW4 674 aa4.87□□□□□ -1.63
CCDC30-212ENST00000507855 OSBPL7Q9BZF2 842 aa4.87□□□□□ -1.63
CCDC30-212ENST00000507855 ABI2Q9NYB9 513 aaPredicted RBP4.87□□□□□ -1.63
CCDC30-212ENST00000507855 SALL4Q9UJQ4 1053 aa4.87□□□□□ -1.63
CCDC30-212ENST00000507855 EGFRP00533 1210 aa4.87□□□□□ -1.63
CCDC30-212ENST00000507855 BMP4P12644 408 aa4.87□□□□□ -1.63
CCDC30-212ENST00000507855 ENOX2Q16206 610 aaKnown RBP4.87□□□□□ -1.63
CCDC30-212ENST00000507855 ACDQ96AP0 544 aa4.87□□□□□ -1.63
CCDC30-212ENST00000507855 ZFYVE28Q9HCC9 887 aa4.87□□□□□ -1.63
CCDC30-212ENST00000507855 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.87□□□□□ -1.63
CCDC30-212ENST00000507855 IGF1RP08069 1367 aa4.87□□□□□ -1.63
CCDC30-212ENST00000507855 LDHBP07195 334 aaKnown RBP4.86□□□□□ -1.63
CCDC30-212ENST00000507855 VSIG8P0DPA2 414 aa4.86□□□□□ -1.63
CCDC30-212ENST00000507855 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.86□□□□□ -1.63
CCDC30-212ENST00000507855 DHX32Q7L7V1 743 aaKnown RBP4.86□□□□□ -1.63
CCDC30-212ENST00000507855 NLRP13Q86W25 1043 aa4.86□□□□□ -1.63
CCDC30-212ENST00000507855 GGA1Q9UJY5 639 aa4.86□□□□□ -1.63
CCDC30-212ENST00000507855 DEKP35659 375 aaKnown RBP4.86□□□□□ -1.63
CCDC30-212ENST00000507855 LBRQ14739 615 aaKnown RBP4.86□□□□□ -1.63
CCDC30-212ENST00000507855 ZSCAN29Q8IWY8 852 aaPredicted RBP4.86□□□□□ -1.63
CCDC30-212ENST00000507855 CCDC74AQ96AQ1 378 aa4.86□□□□□ -1.63
CCDC30-212ENST00000507855 CSRNP1Q96S65 589 aa4.86□□□□□ -1.63
CCDC30-212ENST00000507855 MDFIQ99750 246 aa4.86□□□□□ -1.63
CCDC30-212ENST00000507855 SHISA8B8ZZ34 492 aa4.85□□□□□ -1.63
CCDC30-212ENST00000507855 PHACTR2O75167 634 aa4.85□□□□□ -1.63
CCDC30-212ENST00000507855 HIF1AQ16665 826 aa4.85□□□□□ -1.63
CCDC30-212ENST00000507855 EAPPQ56P03 285 aaPredicted RBP4.85□□□□□ -1.63
CCDC30-212ENST00000507855 PDE12Q6L8Q7 609 aaKnown RBP4.85□□□□□ -1.63
CCDC30-212ENST00000507855 XKR5Q6UX68 686 aa4.85□□□□□ -1.63
CCDC30-212ENST00000507855 ALKBH8Q96BT7 664 aaKnown RBP4.85□□□□□ -1.63
CCDC30-212ENST00000507855 DNAJB12Q9NXW2 375 aaKnown RBP4.85□□□□□ -1.63
CCDC30-212ENST00000507855 PARP2Q9UGN5 583 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms