RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 GRAPLQ8TC17 118 aaPredicted RBP22.72■■□□□ 1.23
SMN1-204ENST00000506163 CELF1Q92879 486 aaKnown RBP22.72■■□□□ 1.23
SMN1-204ENST00000506163 ZNF526Q8TF50 670 aaPredicted RBP22.71■■□□□ 1.23
SMN1-204ENST00000506163 SEC31BQ9NQW1 1179 aa22.71■■□□□ 1.23
SMN1-204ENST00000506163 ATP6V0A2Q9Y487 856 aa22.71■■□□□ 1.23
SMN1-204ENST00000506163 BBOX1O75936 387 aa22.7■■□□□ 1.22
SMN1-204ENST00000506163 CCDC85AQ96PX6 553 aaPredicted RBP22.7■■□□□ 1.22
SMN1-204ENST00000506163 ZBED9Q6R2W3 1325 aa22.7■■□□□ 1.22
SMN1-204ENST00000506163 RARSP54136 660 aaKnown RBP22.69■■□□□ 1.22
SMN1-204ENST00000506163 FKBP4Q02790 459 aaKnown RBP eCLIP22.69■■□□□ 1.22
SMN1-204ENST00000506163 SLC4A10Q6U841 1118 aa22.69■■□□□ 1.22
SMN1-204ENST00000506163 RTKN2Q8IZC4 609 aa22.69■■□□□ 1.22
SMN1-204ENST00000506163 ZNF277Q9NRM2 450 aaPredicted RBP22.69■■□□□ 1.22
SMN1-204ENST00000506163 SMC4Q9NTJ3 1288 aa22.69■■□□□ 1.22
SMN1-204ENST00000506163 CC2D2BQ6DHV5 1058 aa22.67■■□□□ 1.22
SMN1-204ENST00000506163 SP8Q8IXZ3 490 aa22.67■■□□□ 1.22
SMN1-204ENST00000506163 TTLL11Q8NHH1 800 aa22.67■■□□□ 1.22
SMN1-204ENST00000506163 PTPRCP08575 1304 aa22.67■■□□□ 1.22
SMN1-204ENST00000506163 BRPF1P55201 1214 aaPredicted RBP22.66■■□□□ 1.22
SMN1-204ENST00000506163 CTSWP56202 376 aa22.66■■□□□ 1.22
SMN1-204ENST00000506163 PSMD1Q99460 953 aa22.66■■□□□ 1.22
SMN1-204ENST00000506163 PLA2G12BQ9BX93 195 aa22.66■■□□□ 1.22
SMN1-204ENST00000506163 HSP90B1P14625 803 aaKnown RBP22.65■■□□□ 1.22
SMN1-204ENST00000506163 NOB1Q9ULX3 412 aaKnown RBP22.65■■□□□ 1.22
SMN1-204ENST00000506163 DICER1Q9UPY3 1922 aaKnown RBP22.65■■□□□ 1.22
SMN1-204ENST00000506163 ALDH1L1O75891 902 aa22.65■■□□□ 1.22
SMN1-204ENST00000506163 RPS8P62241 208 aaKnown RBP22.65■■□□□ 1.22
SMN1-204ENST00000506163 CCDC152Q4G0S7 254 aa22.65■■□□□ 1.22
SMN1-204ENST00000506163 SRCIN1Q9C0H9 1055 aa22.65■■□□□ 1.22
SMN1-204ENST00000506163 GREM2Q9H772 168 aa22.65■■□□□ 1.22
SMN1-204ENST00000506163 COL4A5P29400 1685 aa22.63■■□□□ 1.21
SMN1-204ENST00000506163 GRM8O00222 908 aa22.63■■□□□ 1.21
SMN1-204ENST00000506163 CSF1RP07333 972 aa22.63■■□□□ 1.21
SMN1-204ENST00000506163 EPHA10Q5JZY3 1008 aa22.63■■□□□ 1.21
SMN1-204ENST00000506163 GPBP1L1Q9HC44 474 aaPredicted RBP22.63■■□□□ 1.21
SMN1-204ENST00000506163 BCAR3O75815 825 aa22.62■■□□□ 1.21
SMN1-204ENST00000506163 IARSP41252 1262 aaKnown RBP22.62■■□□□ 1.21
SMN1-204ENST00000506163 FOXO4P98177 505 aa22.62■■□□□ 1.21
SMN1-204ENST00000506163 MYH3P11055 1940 aa22.61■■□□□ 1.21
SMN1-204ENST00000506163 GRIPAP1Q4V328 841 aa22.61■■□□□ 1.21
SMN1-204ENST00000506163 RTFDC1Q9BY42 306 aaPredicted RBP22.61■■□□□ 1.21
SMN1-204ENST00000506163 NMRK2Q9NPI5 230 aa22.61■■□□□ 1.21
SMN1-204ENST00000506163 ZC3H4Q9UPT8 1303 aaKnown RBP22.61■■□□□ 1.21
SMN1-204ENST00000506163 TIAM2Q8IVF5 1701 aa22.6■■□□□ 1.21
SMN1-204ENST00000506163 NBPF7P0C2Y1 421 aaPredicted RBP22.6■■□□□ 1.21
SMN1-204ENST00000506163 TMC4Q7Z404 712 aa22.6■■□□□ 1.21
SMN1-204ENST00000506163 MPNDQ8N594 471 aa22.6■■□□□ 1.21
SMN1-204ENST00000506163 KAZALD1Q96I82 304 aa22.6■■□□□ 1.21
SMN1-204ENST00000506163 LRRC37AA6NMS7 1700 aa22.6■■□□□ 1.21
SMN1-204ENST00000506163 GLTPD2A6NH11 291 aa22.59■■□□□ 1.21
SMN1-204ENST00000506163 GPSM2P81274 684 aa22.59■■□□□ 1.21
SMN1-204ENST00000506163 C9orf78Q9NZ63 289 aaPredicted RBP22.59■■□□□ 1.21
SMN1-204ENST00000506163 RTL9Q8NET4 1388 aa22.59■■□□□ 1.21
SMN1-204ENST00000506163 DUOX1Q9NRD9 1551 aa22.58■■□□□ 1.21
SMN1-204ENST00000506163 UTYO14607 1347 aa22.58■■□□□ 1.21
SMN1-204ENST00000506163 KIF3CO14782 793 aa22.58■■□□□ 1.21
SMN1-204ENST00000506163 FAM161AQ3B820 660 aa22.58■■□□□ 1.21
SMN1-204ENST00000506163 DPP8Q6V1X1 898 aaPredicted RBP22.58■■□□□ 1.21
SMN1-204ENST00000506163 SUCLG2Q96I99 432 aa22.57■■□□□ 1.2
SMN1-204ENST00000506163 USP44Q9H0E7 712 aa22.57■■□□□ 1.2
SMN1-204ENST00000506163 TMX4Q9H1E5 349 aaPredicted RBP22.57■■□□□ 1.2
SMN1-204ENST00000506163 TNNQ9UQP3 1299 aa22.57■■□□□ 1.2
SMN1-204ENST00000506163 POTECB2RU33 542 aa22.57■■□□□ 1.2
SMN1-204ENST00000506163 FZD9O00144 591 aa22.57■■□□□ 1.2
SMN1-204ENST00000506163 ITGA6P23229 1130 aa22.57■■□□□ 1.2
SMN1-204ENST00000506163 AOC3Q16853 763 aa22.57■■□□□ 1.2
SMN1-204ENST00000506163 ANKRD18AQ8IVF6 992 aa22.57■■□□□ 1.2
SMN1-204ENST00000506163 POLLQ9UGP5 575 aa22.57■■□□□ 1.2
SMN1-204ENST00000506163 NSFL1CQ9UNZ2 370 aaKnown RBP22.57■■□□□ 1.2
SMN1-204ENST00000506163 ZNF541Q9H0D2 1346 aa22.56■■□□□ 1.2
SMN1-204ENST00000506163 RRAGCQ9HB90 399 aa22.56■■□□□ 1.2
SMN1-204ENST00000506163 WTIPA6NIX2 430 aaPredicted RBP22.55■■□□□ 1.2
SMN1-204ENST00000506163 DDNO94850 711 aaPredicted RBP22.55■■□□□ 1.2
SMN1-204ENST00000506163 LMBR1LQ6UX01 489 aa22.55■■□□□ 1.2
SMN1-204ENST00000506163 LARGE2Q8N3Y3 721 aa22.55■■□□□ 1.2
SMN1-204ENST00000506163 ARHGAP45Q92619 1136 aa22.55■■□□□ 1.2
SMN1-204ENST00000506163 CDC5LQ99459 802 aaKnown RBP22.55■■□□□ 1.2
SMN1-204ENST00000506163 API5Q9BZZ5 524 aaKnown RBP22.55■■□□□ 1.2
SMN1-204ENST00000506163 LTBP1Q14766 1721 aa22.54■■□□□ 1.2
SMN1-204ENST00000506163 KDM2BQ8NHM5 1336 aa22.54■■□□□ 1.2
SMN1-204ENST00000506163 PPIP5K2O43314 1243 aa22.54■■□□□ 1.2
SMN1-204ENST00000506163 GPR101Q96P66 508 aaPredicted RBP22.54■■□□□ 1.2
SMN1-204ENST00000506163 BSDC1Q9NW68 430 aaPredicted RBP22.54■■□□□ 1.2
SMN1-204ENST00000506163 KIF16BQ96L93 1317 aa22.53■■□□□ 1.2
SMN1-204ENST00000506163 PODXL2Q9NZ53 605 aa22.53■■□□□ 1.2
SMN1-204ENST00000506163 MINPP1Q9UNW1 487 aa22.53■■□□□ 1.2
SMN1-204ENST00000506163 TRIM27P14373 513 aa22.52■■□□□ 1.2
SMN1-204ENST00000506163 KIAA2012Q0VF49 1180 aa22.52■■□□□ 1.2
SMN1-204ENST00000506163 DPY19L2Q6NUT2 758 aa22.52■■□□□ 1.2
SMN1-204ENST00000506163 SUPT20HQ8NEM7 779 aa22.52■■□□□ 1.2
SMN1-204ENST00000506163 TBC1D16Q8TBP0 767 aa22.52■■□□□ 1.2
SMN1-204ENST00000506163 VPS33BQ9H267 617 aa22.52■■□□□ 1.2
SMN1-204ENST00000506163 CCT4P50991 539 aaKnown RBP22.51■■□□□ 1.19
SMN1-204ENST00000506163 ANKRD44Q8N8A2 993 aa22.51■■□□□ 1.19
SMN1-204ENST00000506163 JDP2Q8WYK2 163 aa22.51■■□□□ 1.19
SMN1-204ENST00000506163 FRAT1Q92837 279 aaPredicted RBP22.51■■□□□ 1.19
SMN1-204ENST00000506163 BICC1Q9H694 974 aaKnown RBP22.51■■□□□ 1.19
SMN1-204ENST00000506163 SPEF2Q9C093 1822 aa22.51■■□□□ 1.19
SMN1-204ENST00000506163 CHMP3Q9Y3E7 222 aa22.5■■□□□ 1.19
SMN1-204ENST00000506163 ANKRD18BA2A2Z9 1011 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms