RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 DCTN1Q14203 1278 aa12.29□□□□□ -0.44
PTPN20-216ENST00000506080 FAM161AQ3B820 660 aa12.29□□□□□ -0.44
PTPN20-216ENST00000506080 PAXIP1Q6ZW49 1069 aaPredicted RBP12.29□□□□□ -0.44
PTPN20-216ENST00000506080 JDP2Q8WYK2 163 aa12.29□□□□□ -0.44
PTPN20-216ENST00000506080 RTF1Q92541 710 aaKnown RBP12.29□□□□□ -0.44
PTPN20-216ENST00000506080 RSPH6AQ9H0K4 717 aa12.29□□□□□ -0.44
PTPN20-216ENST00000506080 DDX21Q9NR30 783 aaKnown RBP eCLIP12.29□□□□□ -0.44
PTPN20-216ENST00000506080 EIF6P56537 245 aaKnown RBP12.28□□□□□ -0.44
PTPN20-216ENST00000506080 NUTM1Q86Y26 1132 aa12.28□□□□□ -0.44
PTPN20-216ENST00000506080 NGEFQ8N5V2 710 aa12.28□□□□□ -0.44
PTPN20-216ENST00000506080 ABCC12Q96J65 1359 aa12.28□□□□□ -0.44
PTPN20-216ENST00000506080 LMOD1P29536 600 aaPredicted RBP12.28□□□□□ -0.44
PTPN20-216ENST00000506080 EPS15P42566 896 aa12.28□□□□□ -0.44
PTPN20-216ENST00000506080 CYP4F22Q6NT55 531 aa12.28□□□□□ -0.44
PTPN20-216ENST00000506080 SLC51AQ86UW1 340 aa12.28□□□□□ -0.44
PTPN20-216ENST00000506080 PSMD1Q99460 953 aa12.28□□□□□ -0.44
PTPN20-216ENST00000506080 COL4A5P29400 1685 aa12.27□□□□□ -0.44
PTPN20-216ENST00000506080 SNED1Q8TER0 1413 aa12.27□□□□□ -0.44
PTPN20-216ENST00000506080 TCERG1O14776 1098 aaKnown RBP12.27□□□□□ -0.45
PTPN20-216ENST00000506080 CCER1Q8TC90 406 aaPredicted RBP12.27□□□□□ -0.45
PTPN20-216ENST00000506080 CAPNS2Q96L46 248 aa12.27□□□□□ -0.45
PTPN20-216ENST00000506080 CFAP53Q96M91 514 aa12.27□□□□□ -0.45
PTPN20-216ENST00000506080 LTBP1Q14766 1721 aa12.26□□□□□ -0.45
PTPN20-216ENST00000506080 CCDC85CA6NKD9 419 aa12.26□□□□□ -0.45
PTPN20-216ENST00000506080 TRAF5O00463 557 aa12.26□□□□□ -0.45
PTPN20-216ENST00000506080 RGL2O15211 777 aa12.26□□□□□ -0.45
PTPN20-216ENST00000506080 SLC34A2O95436 690 aa12.26□□□□□ -0.45
PTPN20-216ENST00000506080 U2AF1L5P0DN76 240 aaPredicted RBP12.26□□□□□ -0.45
PTPN20-216ENST00000506080 SCNN1DP51172 638 aa12.26□□□□□ -0.45
PTPN20-216ENST00000506080 U2AF1Q01081 240 aaKnown RBP eCLIP12.26□□□□□ -0.45
PTPN20-216ENST00000506080 CRY2Q49AN0 593 aa12.26□□□□□ -0.45
PTPN20-216ENST00000506080 LARGE2Q8N3Y3 721 aa12.26□□□□□ -0.45
PTPN20-216ENST00000506080 RPGRQ92834 1020 aaKnown RBP12.26□□□□□ -0.45
PTPN20-216ENST00000506080 BEGAINQ9BUH8 593 aa12.26□□□□□ -0.45
PTPN20-216ENST00000506080 NYXQ9GZU5 481 aa12.26□□□□□ -0.45
PTPN20-216ENST00000506080 MIS18AQ9NYP9 233 aa12.26□□□□□ -0.45
PTPN20-216ENST00000506080 TSKSQ9UJT2 592 aa12.26□□□□□ -0.45
PTPN20-216ENST00000506080 NPC1L1Q9UHC9 1359 aa12.25□□□□□ -0.45
PTPN20-216ENST00000506080 GPTP24298 496 aa12.25□□□□□ -0.45
PTPN20-216ENST00000506080 ECE1P42892 770 aa12.25□□□□□ -0.45
PTPN20-216ENST00000506080 CST9Q5W186 159 aa12.25□□□□□ -0.45
PTPN20-216ENST00000506080 CC2D2BQ6DHV5 1058 aa12.25□□□□□ -0.45
PTPN20-216ENST00000506080 GPR101Q96P66 508 aaPredicted RBP12.25□□□□□ -0.45
PTPN20-216ENST00000506080 NUDCQ9Y266 331 aa12.25□□□□□ -0.45
PTPN20-216ENST00000506080 BOLA1Q9Y3E2 137 aa12.25□□□□□ -0.45
PTPN20-216ENST00000506080 RRP7AQ9Y3A4 280 aaKnown RBP12.24□□□□□ -0.45
PTPN20-216ENST00000506080 AOC2O75106 756 aa12.23□□□□□ -0.45
PTPN20-216ENST00000506080 TAF7Q15545 349 aaPredicted RBP12.23□□□□□ -0.45
PTPN20-216ENST00000506080 TTLL7Q6ZT98 887 aa12.23□□□□□ -0.45
PTPN20-216ENST00000506080 USP50Q70EL3 339 aaPredicted RBP12.23□□□□□ -0.45
PTPN20-216ENST00000506080 NIM1KQ8IY84 436 aa12.23□□□□□ -0.45
PTPN20-216ENST00000506080 ZBTB3Q9H5J0 574 aa12.23□□□□□ -0.45
PTPN20-216ENST00000506080 TLL2Q9Y6L7 1015 aa12.23□□□□□ -0.45
PTPN20-216ENST00000506080 MAP3K15Q6ZN16 1313 aa12.23□□□□□ -0.45
PTPN20-216ENST00000506080 UBN2Q6ZU65 1347 aa12.23□□□□□ -0.45
PTPN20-216ENST00000506080 THSD7BQ9C0I4 1608 aa12.22□□□□□ -0.45
PTPN20-216ENST00000506080 ERVV-1B6SEH8 477 aa12.22□□□□□ -0.45
PTPN20-216ENST00000506080 PPEF1O14829 653 aaPredicted RBP12.22□□□□□ -0.45
PTPN20-216ENST00000506080 MYL6BP14649 208 aa12.22□□□□□ -0.45
PTPN20-216ENST00000506080 HOXA10P31260 410 aaPredicted RBP12.22□□□□□ -0.45
PTPN20-216ENST00000506080 MLLT1Q03111 559 aaPredicted RBP12.22□□□□□ -0.45
PTPN20-216ENST00000506080 SUSD4Q5VX71 490 aa12.22□□□□□ -0.45
PTPN20-216ENST00000506080 KIF6Q6ZMV9 814 aa12.22□□□□□ -0.45
PTPN20-216ENST00000506080 RBM17Q96I25 401 aaKnown RBP12.22□□□□□ -0.45
PTPN20-216ENST00000506080 PPIP5K2O43314 1243 aa12.21□□□□□ -0.45
PTPN20-216ENST00000506080 HTATSF1O43719 755 aaKnown RBP12.21□□□□□ -0.45
PTPN20-216ENST00000506080 ECM2O94769 699 aaPredicted RBP12.21□□□□□ -0.45
PTPN20-216ENST00000506080 AOC3Q16853 763 aa12.21□□□□□ -0.45
PTPN20-216ENST00000506080 CFAP44Q96MT7 982 aa12.21□□□□□ -0.45
PTPN20-216ENST00000506080 LAMB4A4D0S4 1761 aa12.2□□□□□ -0.46
PTPN20-216ENST00000506080 G3V3G9 751 aa12.2□□□□□ -0.46
PTPN20-216ENST00000506080 CELF2O95319 508 aaKnown RBP12.2□□□□□ -0.46
PTPN20-216ENST00000506080 GRIPAP1Q4V328 841 aa12.2□□□□□ -0.46
PTPN20-216ENST00000506080 CRAMP1Q96RY5 1269 aa12.2□□□□□ -0.46
PTPN20-216ENST00000506080 ADARB2Q9NS39 739 aaKnown RBP12.2□□□□□ -0.46
PTPN20-216ENST00000506080 PCDH10Q9P2E7 1040 aa12.2□□□□□ -0.46
PTPN20-216ENST00000506080 NUP98P52948 1817 aa12.2□□□□□ -0.46
PTPN20-216ENST00000506080 RIC1Q4ADV7 1423 aa12.2□□□□□ -0.46
PTPN20-216ENST00000506080 TRPM7Q96QT4 1865 aa12.2□□□□□ -0.46
PTPN20-216ENST00000506080 SNPHO15079 494 aa12.2□□□□□ -0.46
PTPN20-216ENST00000506080 NTSR2O95665 410 aa12.2□□□□□ -0.46
PTPN20-216ENST00000506080 PPP2R1AP30153 589 aa12.2□□□□□ -0.46
PTPN20-216ENST00000506080 MAP2K2P36507 400 aa12.2□□□□□ -0.46
PTPN20-216ENST00000506080 ZNF408Q9H9D4 720 aa12.2□□□□□ -0.46
PTPN20-216ENST00000506080 GPRC5DQ9NZD1 345 aa12.2□□□□□ -0.46
PTPN20-216ENST00000506080 IBTKQ9P2D0 1353 aaPredicted RBP12.19□□□□□ -0.46
PTPN20-216ENST00000506080 RGS19P49795 217 aa12.19□□□□□ -0.46
PTPN20-216ENST00000506080 CXCL9Q07325 125 aa12.19□□□□□ -0.46
PTPN20-216ENST00000506080 SAPCD2Q86UD0 394 aa12.19□□□□□ -0.46
PTPN20-216ENST00000506080 ZNF34Q8IZ26 560 aa12.19□□□□□ -0.46
PTPN20-216ENST00000506080 GLIS2Q9BZE0 524 aaPredicted RBP12.19□□□□□ -0.46
PTPN20-216ENST00000506080 TMX4Q9H1E5 349 aaPredicted RBP12.19□□□□□ -0.46
PTPN20-216ENST00000506080 GMPSP49915 693 aaPredicted RBP12.18□□□□□ -0.46
PTPN20-216ENST00000506080 EIF4A1P60842 406 aaKnown RBP12.18□□□□□ -0.46
PTPN20-216ENST00000506080 GIGYF2Q6Y7W6 1299 aaKnown RBP12.18□□□□□ -0.46
PTPN20-216ENST00000506080 PPP1R42Q7Z4L9 355 aa12.18□□□□□ -0.46
PTPN20-216ENST00000506080 NLRP3Q96P20 1036 aa12.18□□□□□ -0.46
PTPN20-216ENST00000506080 THUMPD2Q9BTF0 503 aaKnown RBP12.18□□□□□ -0.46
PTPN20-216ENST00000506080 MCOLN1Q9GZU1 580 aa12.18□□□□□ -0.46
PTPN20-216ENST00000506080 ZNRF3Q9ULT6 936 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms