RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 CXCL9Q07325 125 aa7.71□□□□□ -1.18
GYPB-205ENST00000505583 CST9Q5W186 159 aa7.71□□□□□ -1.18
GYPB-205ENST00000505583 COPS6Q7L5N1 327 aa7.71□□□□□ -1.18
GYPB-205ENST00000505583 SPOCK2Q92563 424 aa7.71□□□□□ -1.18
GYPB-205ENST00000505583 DDX21Q9NR30 783 aaKnown RBP eCLIP7.71□□□□□ -1.18
GYPB-205ENST00000505583 ATP6V0A2Q9Y487 856 aa7.71□□□□□ -1.18
GYPB-205ENST00000505583 LRRC37AA6NMS7 1700 aa7.71□□□□□ -1.18
GYPB-205ENST00000505583 SHTN1A0MZ66 631 aa7.7□□□□□ -1.18
GYPB-205ENST00000505583 PPIP5K2O43314 1243 aa7.7□□□□□ -1.18
GYPB-205ENST00000505583 AIMP1Q12904 312 aaKnown RBP7.7□□□□□ -1.18
GYPB-205ENST00000505583 DEFB115Q30KQ5 88 aa7.7□□□□□ -1.18
GYPB-205ENST00000505583 PPP1R42Q7Z4L9 355 aa7.7□□□□□ -1.18
GYPB-205ENST00000505583 NLRP10Q86W26 655 aa7.7□□□□□ -1.18
GYPB-205ENST00000505583 NIM1KQ8IY84 436 aa7.7□□□□□ -1.18
GYPB-205ENST00000505583 CCDC146Q8IYE0 955 aa7.7□□□□□ -1.18
GYPB-205ENST00000505583 XAGE3Q8WTP9 111 aa7.7□□□□□ -1.18
GYPB-205ENST00000505583 NLRP3Q96P20 1036 aa7.7□□□□□ -1.18
GYPB-205ENST00000505583 UTP14AQ9BVJ6 771 aaKnown RBP7.7□□□□□ -1.18
GYPB-205ENST00000505583 PRDM10Q9NQV6 1147 aa7.7□□□□□ -1.18
GYPB-205ENST00000505583 GPRC5DQ9NZD1 345 aa7.7□□□□□ -1.18
GYPB-205ENST00000505583 ABT1Q9ULW3 272 aaKnown RBP7.7□□□□□ -1.18
GYPB-205ENST00000505583 WDR33Q9C0J8 1336 aaKnown RBP7.7□□□□□ -1.18
GYPB-205ENST00000505583 YDJCA8MPS7 323 aa7.69□□□□□ -1.18
GYPB-205ENST00000505583 HSPA8P11142 646 aaKnown RBP7.69□□□□□ -1.18
GYPB-205ENST00000505583 LMOD1P29536 600 aaPredicted RBP7.69□□□□□ -1.18
GYPB-205ENST00000505583 CTCFP49711 727 aaPredicted RBP7.69□□□□□ -1.18
GYPB-205ENST00000505583 GMPSP49915 693 aaPredicted RBP7.69□□□□□ -1.18
GYPB-205ENST00000505583 HIRAP54198 1017 aaPredicted RBP7.69□□□□□ -1.18
GYPB-205ENST00000505583 NEUROD2Q15784 382 aa7.69□□□□□ -1.18
GYPB-205ENST00000505583 GRIPAP1Q4V328 841 aa7.69□□□□□ -1.18
GYPB-205ENST00000505583 PARP10Q53GL7 1025 aa7.69□□□□□ -1.18
GYPB-205ENST00000505583 CYP4F22Q6NT55 531 aa7.69□□□□□ -1.18
GYPB-205ENST00000505583 DLK2Q6UY11 383 aa7.69□□□□□ -1.18
GYPB-205ENST00000505583 REM2Q8IYK8 340 aaPredicted RBP7.69□□□□□ -1.18
GYPB-205ENST00000505583 RTFDC1Q9BY42 306 aaPredicted RBP7.69□□□□□ -1.18
GYPB-205ENST00000505583 TRIM35Q9UPQ4 493 aa7.69□□□□□ -1.18
GYPB-205ENST00000505583 CHL1O00533 1208 aa7.68□□□□□ -1.18
GYPB-205ENST00000505583 GRM1Q13255 1194 aa7.68□□□□□ -1.18
GYPB-205ENST00000505583 TCIRG1Q13488 830 aa7.68□□□□□ -1.18
GYPB-205ENST00000505583 USP50Q70EL3 339 aaPredicted RBP7.68□□□□□ -1.18
GYPB-205ENST00000505583 SP8Q8IXZ3 490 aa7.68□□□□□ -1.18
GYPB-205ENST00000505583 AIDAQ96BJ3 306 aa7.68□□□□□ -1.18
GYPB-205ENST00000505583 CAPNS2Q96L46 248 aa7.68□□□□□ -1.18
GYPB-205ENST00000505583 GLIS2Q9BZE0 524 aaPredicted RBP7.68□□□□□ -1.18
GYPB-205ENST00000505583 PNNQ9H307 717 aaKnown RBP7.68□□□□□ -1.18
GYPB-205ENST00000505583 CHPF2Q9P2E5 772 aa7.68□□□□□ -1.18
GYPB-205ENST00000505583 TRMT112Q9UI30 125 aaKnown RBP7.68□□□□□ -1.18
GYPB-205ENST00000505583 ZNRF3Q9ULT6 936 aa7.68□□□□□ -1.18
GYPB-205ENST00000505583 ATP5J2-PTCD1G3V325 749 aa7.67□□□□□ -1.18
GYPB-205ENST00000505583 AOC2O75106 756 aa7.67□□□□□ -1.18
GYPB-205ENST00000505583 BBOX1O75936 387 aa7.67□□□□□ -1.18
GYPB-205ENST00000505583 RAD17O75943 681 aa7.67□□□□□ -1.18
GYPB-205ENST00000505583 KIAA2012Q0VF49 1180 aa7.67□□□□□ -1.18
GYPB-205ENST00000505583 DPP8Q6V1X1 898 aaPredicted RBP7.67□□□□□ -1.18
GYPB-205ENST00000505583 MPNDQ8N594 471 aa7.67□□□□□ -1.18
GYPB-205ENST00000505583 TRPM4Q8TD43 1214 aa7.67□□□□□ -1.18
GYPB-205ENST00000505583 CELF1Q92879 486 aaKnown RBP7.67□□□□□ -1.18
GYPB-205ENST00000505583 ADARB2Q9NS39 739 aaKnown RBP7.67□□□□□ -1.18
GYPB-205ENST00000505583 BABAM1Q9NWV8 329 aa7.67□□□□□ -1.18
GYPB-205ENST00000505583 TSKSQ9UJT2 592 aa7.67□□□□□ -1.18
GYPB-205ENST00000505583 LAS1LQ9Y4W2 734 aaKnown RBP7.67□□□□□ -1.18
GYPB-205ENST00000505583 TLL2Q9Y6L7 1015 aa7.67□□□□□ -1.18
GYPB-205ENST00000505583 POLR2AP24928 1970 aaKnown RBP7.67□□□□□ -1.18
GYPB-205ENST00000505583 SCN9AQ15858 1988 aa7.67□□□□□ -1.18
GYPB-205ENST00000505583 SH3TC1Q8TE82 1336 aa7.67□□□□□ -1.18
GYPB-205ENST00000505583 ECM2O94769 699 aaPredicted RBP7.66□□□□□ -1.18
GYPB-205ENST00000505583 EGFRP00533 1210 aa7.66□□□□□ -1.18
GYPB-205ENST00000505583 DDX10Q13206 875 aaKnown RBP7.66□□□□□ -1.18
GYPB-205ENST00000505583 GRAPQ13588 217 aa7.66□□□□□ -1.18
GYPB-205ENST00000505583 RALBP1Q15311 655 aa7.66□□□□□ -1.18
GYPB-205ENST00000505583 HSP90AB3PQ58FF7 597 aa7.66□□□□□ -1.18
GYPB-205ENST00000505583 RTL5Q5HYW3 569 aaPredicted RBP7.66□□□□□ -1.18
GYPB-205ENST00000505583 CIAPIN1Q6FI81 312 aa7.66□□□□□ -1.18
GYPB-205ENST00000505583 PAXIP1Q6ZW49 1069 aaPredicted RBP7.66□□□□□ -1.18
GYPB-205ENST00000505583 DDX46Q7L014 1031 aaKnown RBP7.66□□□□□ -1.18
GYPB-205ENST00000505583 SAPCD2Q86UD0 394 aa7.66□□□□□ -1.18
GYPB-205ENST00000505583 GRAPLQ8TC17 118 aaPredicted RBP7.66□□□□□ -1.18
GYPB-205ENST00000505583 BBXQ8WY36 941 aaPredicted RBP7.66□□□□□ -1.18
GYPB-205ENST00000505583 FAM89AQ96GI7 184 aa7.66□□□□□ -1.18
GYPB-205ENST00000505583 ABHD8Q96I13 439 aa7.66□□□□□ -1.18
GYPB-205ENST00000505583 GPR101Q96P66 508 aaPredicted RBP7.66□□□□□ -1.18
GYPB-205ENST00000505583 ISCA1Q9BUE6 129 aa7.66□□□□□ -1.18
GYPB-205ENST00000505583 VPS33BQ9H267 617 aa7.66□□□□□ -1.18
GYPB-205ENST00000505583 KCNQ5Q9NR82 932 aa7.66□□□□□ -1.18
GYPB-205ENST00000505583 PGAP2Q9UHJ9 254 aa7.66□□□□□ -1.18
GYPB-205ENST00000505583 RIMBP2O15034 1052 aa7.65□□□□□ -1.18
GYPB-205ENST00000505583 CELF2O95319 508 aaKnown RBP7.65□□□□□ -1.18
GYPB-205ENST00000505583 MAP2K1Q02750 393 aaPredicted RBP7.65□□□□□ -1.18
GYPB-205ENST00000505583 LMOD3Q0VAK6 560 aa7.65□□□□□ -1.18
GYPB-205ENST00000505583 HDGFL1Q5TGJ6 251 aa7.65□□□□□ -1.18
GYPB-205ENST00000505583 ANKRD13DQ6ZTN6 518 aa7.65□□□□□ -1.18
GYPB-205ENST00000505583 SAMD7Q7Z3H4 446 aa7.65□□□□□ -1.18
GYPB-205ENST00000505583 SUPT20HQ8NEM7 779 aa7.65□□□□□ -1.18
GYPB-205ENST00000505583 PLBD2Q8NHP8 589 aa7.65□□□□□ -1.18
GYPB-205ENST00000505583 ZIC5Q96T25 663 aa7.65□□□□□ -1.18
GYPB-205ENST00000505583 MYBBP1AQ9BQG0 1328 aaKnown RBP7.65□□□□□ -1.18
GYPB-205ENST00000505583 TMX4Q9H1E5 349 aaPredicted RBP7.65□□□□□ -1.18
GYPB-205ENST00000505583 DBNDD1Q9H9R9 158 aa7.65□□□□□ -1.18
GYPB-205ENST00000505583 POLLQ9UGP5 575 aa7.65□□□□□ -1.18
GYPB-205ENST00000505583 CNOT7Q9UIV1 285 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms