RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 CDHR2Q9BYE9 1310 aa8.18□□□□□ -1.1
GYPB-204ENST00000504951 POTEB3A0JP26 581 aa8.17□□□□□ -1.1
GYPB-204ENST00000504951 TNNT2P45379 298 aaPredicted RBP8.17□□□□□ -1.1
GYPB-204ENST00000504951 DGKZQ13574 1117 aa8.17□□□□□ -1.1
GYPB-204ENST00000504951 MTHFSDQ2M296 383 aaKnown RBP8.17□□□□□ -1.1
GYPB-204ENST00000504951 POTEBQ6S5H4 581 aa8.17□□□□□ -1.1
GYPB-204ENST00000504951 NPM2Q86SE8 214 aaKnown RBP8.17□□□□□ -1.1
GYPB-204ENST00000504951 NBPF5PQ86XG9 351 aaPredicted RBP8.17□□□□□ -1.1
GYPB-204ENST00000504951 EFCAB3Q8N7B9 438 aa8.17□□□□□ -1.1
GYPB-204ENST00000504951 GCC1Q96CN9 775 aa8.17□□□□□ -1.1
GYPB-204ENST00000504951 FMNL2Q96PY5 1086 aa8.17□□□□□ -1.1
GYPB-204ENST00000504951 ADARB2Q9NS39 739 aaKnown RBP8.17□□□□□ -1.1
GYPB-204ENST00000504951 KIF7Q2M1P5 1343 aa8.17□□□□□ -1.1
GYPB-204ENST00000504951 AOC2O75106 756 aa8.16□□□□□ -1.1
GYPB-204ENST00000504951 EPS15P42566 896 aa8.16□□□□□ -1.1
GYPB-204ENST00000504951 RIC1Q4ADV7 1423 aa8.16□□□□□ -1.1
GYPB-204ENST00000504951 DZIP3Q86Y13 1208 aaKnown RBP8.16□□□□□ -1.1
GYPB-204ENST00000504951 GPRC5DQ9NZD1 345 aa8.16□□□□□ -1.1
GYPB-204ENST00000504951 CASP8AP2Q9UKL3 1982 aa8.16□□□□□ -1.1
GYPB-204ENST00000504951 CEMIPQ8WUJ3 1361 aa8.15□□□□□ -1.1
GYPB-204ENST00000504951 NPHP1O15259 732 aa8.15□□□□□ -1.1
GYPB-204ENST00000504951 A1BGP04217 495 aa8.15□□□□□ -1.1
GYPB-204ENST00000504951 PKN2Q16513 984 aaKnown RBP8.15□□□□□ -1.1
GYPB-204ENST00000504951 MORC1Q86VD1 984 aa8.15□□□□□ -1.1
GYPB-204ENST00000504951 CCDC24Q8N4L8 307 aa8.15□□□□□ -1.1
GYPB-204ENST00000504951 IL17REQ8NFR9 667 aa8.15□□□□□ -1.1
GYPB-204ENST00000504951 CRAMP1Q96RY5 1269 aa8.15□□□□□ -1.1
GYPB-204ENST00000504951 ZSWIM6Q9HCJ5 1215 aa8.15□□□□□ -1.1
GYPB-204ENST00000504951 CELF2O95319 508 aaKnown RBP8.14□□□□□ -1.11
GYPB-204ENST00000504951 FMR1Q06787 632 aaKnown RBP eCLIP8.14□□□□□ -1.11
GYPB-204ENST00000504951 TEFQ10587 303 aa8.14□□□□□ -1.11
GYPB-204ENST00000504951 TRIM26Q12899 539 aaPredicted RBP8.14□□□□□ -1.11
GYPB-204ENST00000504951 NOM1Q5C9Z4 860 aaKnown RBP8.14□□□□□ -1.11
GYPB-204ENST00000504951 CIAPIN1Q6FI81 312 aa8.14□□□□□ -1.11
GYPB-204ENST00000504951 CDC37L1Q7L3B6 337 aa8.14□□□□□ -1.11
GYPB-204ENST00000504951 CCDC102AQ96A19 550 aa8.14□□□□□ -1.11
GYPB-204ENST00000504951 RTFDC1Q9BY42 306 aaPredicted RBP8.14□□□□□ -1.11
GYPB-204ENST00000504951 NYXQ9GZU5 481 aa8.14□□□□□ -1.11
GYPB-204ENST00000504951 PANK3Q9H999 370 aa8.14□□□□□ -1.11
GYPB-204ENST00000504951 CACNA1SQ13698 1873 aa8.14□□□□□ -1.11
GYPB-204ENST00000504951 BCORQ6W2J9 1755 aa8.14□□□□□ -1.11
GYPB-204ENST00000504951 IBTKQ9P2D0 1353 aaPredicted RBP8.13□□□□□ -1.11
GYPB-204ENST00000504951 GNAT3A8MTJ3 354 aa8.13□□□□□ -1.11
GYPB-204ENST00000504951 ERVV-1B6SEH8 477 aa8.13□□□□□ -1.11
GYPB-204ENST00000504951 TRAF5O00463 557 aa8.13□□□□□ -1.11
GYPB-204ENST00000504951 PAXIP1Q6ZW49 1069 aaPredicted RBP8.13□□□□□ -1.11
GYPB-204ENST00000504951 GAS2L2Q8NHY3 880 aa8.13□□□□□ -1.11
GYPB-204ENST00000504951 TSKSQ9UJT2 592 aa8.13□□□□□ -1.11
GYPB-204ENST00000504951 USP16Q9Y5T5 823 aa8.13□□□□□ -1.11
GYPB-204ENST00000504951 FAM155AB1AL88 458 aaPredicted RBP8.12□□□□□ -1.11
GYPB-204ENST00000504951 RIOK3O14730 519 aaKnown RBP8.12□□□□□ -1.11
GYPB-204ENST00000504951 SNRPA1P09661 255 aaKnown RBP8.12□□□□□ -1.11
GYPB-204ENST00000504951 OLFM4Q6UX06 510 aa8.12□□□□□ -1.11
GYPB-204ENST00000504951 CTU1Q7Z7A3 348 aaKnown RBP8.12□□□□□ -1.11
GYPB-204ENST00000504951 MICALL2Q8IY33 904 aa8.12□□□□□ -1.11
GYPB-204ENST00000504951 LARGE2Q8N3Y3 721 aa8.12□□□□□ -1.11
GYPB-204ENST00000504951 CFAP44Q96MT7 982 aa8.12□□□□□ -1.11
GYPB-204ENST00000504951 POLR3GLQ9BT43 218 aa8.12□□□□□ -1.11
GYPB-204ENST00000504951 ZNRF3Q9ULT6 936 aa8.12□□□□□ -1.11
GYPB-204ENST00000504951 NIP7Q9Y221 180 aaKnown RBP eCLIP8.12□□□□□ -1.11
GYPB-204ENST00000504951 GJA3Q9Y6H8 435 aa8.12□□□□□ -1.11
GYPB-204ENST00000504951 COL4A5P29400 1685 aa8.11□□□□□ -1.11
GYPB-204ENST00000504951 CXCL9Q07325 125 aa8.11□□□□□ -1.11
GYPB-204ENST00000504951 AMER1Q5JTC6 1135 aaPredicted RBP8.11□□□□□ -1.11
GYPB-204ENST00000504951 RGMBQ6NW40 437 aa8.11□□□□□ -1.11
GYPB-204ENST00000504951 NIM1KQ8IY84 436 aa8.11□□□□□ -1.11
GYPB-204ENST00000504951 NBPF15Q8N660 670 aa8.11□□□□□ -1.11
GYPB-204ENST00000504951 SUPT20HQ8NEM7 779 aa8.11□□□□□ -1.11
GYPB-204ENST00000504951 DPF2Q92785 391 aa8.11□□□□□ -1.11
GYPB-204ENST00000504951 KNSTRNQ9Y448 316 aa8.11□□□□□ -1.11
GYPB-204ENST00000504951 SIPA1L3O60292 1781 aaPredicted RBP8.11□□□□□ -1.11
GYPB-204ENST00000504951 NPC1L1Q9UHC9 1359 aa8.1□□□□□ -1.11
GYPB-204ENST00000504951 BTBD11A6QL63 1104 aa8.1□□□□□ -1.11
GYPB-204ENST00000504951 NBPF26B4DH59 902 aa8.1□□□□□ -1.11
GYPB-204ENST00000504951 DIAPH1O60610 1272 aaKnown RBP8.1□□□□□ -1.11
GYPB-204ENST00000504951 HIRAP54198 1017 aaPredicted RBP8.1□□□□□ -1.11
GYPB-204ENST00000504951 TNIP1Q15025 636 aa8.1□□□□□ -1.11
GYPB-204ENST00000504951 SLC10A5Q5PT55 438 aa8.1□□□□□ -1.11
GYPB-204ENST00000504951 NBPF10Q6P3W6 841 aaKnown RBP8.1□□□□□ -1.11
GYPB-204ENST00000504951 RBM17Q96I25 401 aaKnown RBP8.1□□□□□ -1.11
GYPB-204ENST00000504951 GLIS2Q9BZE0 524 aaPredicted RBP8.1□□□□□ -1.11
GYPB-204ENST00000504951 RNF186Q9NXI6 227 aa8.1□□□□□ -1.11
GYPB-204ENST00000504951 TAOK2Q9UL54 1235 aa8.1□□□□□ -1.11
GYPB-204ENST00000504951 ATP6V0A2Q9Y487 856 aa8.1□□□□□ -1.11
GYPB-204ENST00000504951 HTATSF1O43719 755 aaKnown RBP8.09□□□□□ -1.11
GYPB-204ENST00000504951 BBOX1O75936 387 aa8.09□□□□□ -1.11
GYPB-204ENST00000504951 HMOX1P09601 288 aa8.09□□□□□ -1.11
GYPB-204ENST00000504951 HUNKP57058 714 aa8.09□□□□□ -1.11
GYPB-204ENST00000504951 GRM1Q13255 1194 aa8.09□□□□□ -1.11
GYPB-204ENST00000504951 NECTIN2Q92692 538 aa8.09□□□□□ -1.11
GYPB-204ENST00000504951 CSRNP1Q96S65 589 aa8.09□□□□□ -1.11
GYPB-204ENST00000504951 ZIC5Q96T25 663 aa8.09□□□□□ -1.11
GYPB-204ENST00000504951 PCGF6Q9BYE7 350 aa8.09□□□□□ -1.11
GYPB-204ENST00000504951 ZNF330Q9Y3S2 320 aaPredicted RBP8.09□□□□□ -1.11
GYPB-204ENST00000504951 H7C1D1 291 aa8.08□□□□□ -1.12
GYPB-204ENST00000504951 PPIP5K2O43314 1243 aa8.08□□□□□ -1.12
GYPB-204ENST00000504951 GTF2E1P29083 439 aaPredicted RBP8.08□□□□□ -1.12
GYPB-204ENST00000504951 GMPSP49915 693 aaPredicted RBP8.08□□□□□ -1.12
GYPB-204ENST00000504951 SOX10P56693 466 aa8.08□□□□□ -1.12
GYPB-204ENST00000504951 FKBP1BP68106 108 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms