RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 TBC1D10BQ4KMP7 808 aaPredicted RBP17■□□□□ 0.31
LSM6-204ENST00000504181 REM2Q8IYK8 340 aaPredicted RBP17■□□□□ 0.31
LSM6-204ENST00000504181 CRAMP1Q96RY5 1269 aa17■□□□□ 0.31
LSM6-204ENST00000504181 COLQQ9Y215 455 aaPredicted RBP17■□□□□ 0.31
LSM6-204ENST00000504181 TMX4Q9H1E5 349 aaPredicted RBP16.99■□□□□ 0.31
LSM6-204ENST00000504181 A0A0C4DFX4 3053 aa16.98■□□□□ 0.31
LSM6-204ENST00000504181 GNAT3A8MTJ3 354 aa16.98■□□□□ 0.31
LSM6-204ENST00000504181 NBPF26B4DH59 902 aa16.98■□□□□ 0.31
LSM6-204ENST00000504181 RGL2O15211 777 aa16.98■□□□□ 0.31
LSM6-204ENST00000504181 EGFRP00533 1210 aa16.98■□□□□ 0.31
LSM6-204ENST00000504181 NBPF10Q6P3W6 841 aaKnown RBP16.98■□□□□ 0.31
LSM6-204ENST00000504181 SLC17A8Q8NDX2 589 aa16.98■□□□□ 0.31
LSM6-204ENST00000504181 SUPT20HQ8NEM7 779 aa16.98■□□□□ 0.31
LSM6-204ENST00000504181 DCPSQ96C86 337 aaKnown RBP16.98■□□□□ 0.31
LSM6-204ENST00000504181 ZBTB12Q9Y330 459 aaPredicted RBP16.98■□□□□ 0.31
LSM6-204ENST00000504181 COL6A3P12111 3177 aa16.98■□□□□ 0.31
LSM6-204ENST00000504181 BTBD11A6QL63 1104 aa16.97■□□□□ 0.31
LSM6-204ENST00000504181 LRRC37AA6NMS7 1700 aa16.96■□□□□ 0.31
LSM6-204ENST00000504181 YDJCA8MPS7 323 aa16.96■□□□□ 0.31
LSM6-204ENST00000504181 GPR25O00155 361 aa16.96■□□□□ 0.31
LSM6-204ENST00000504181 KIAA2012Q0VF49 1180 aa16.96■□□□□ 0.31
LSM6-204ENST00000504181 RBM26Q5T8P6 1007 aaKnown RBP16.96■□□□□ 0.31
LSM6-204ENST00000504181 C3orf67Q6ZVT6 689 aa16.96■□□□□ 0.31
LSM6-204ENST00000504181 RTFDC1Q9BY42 306 aaPredicted RBP16.96■□□□□ 0.31
LSM6-204ENST00000504181 PANK3Q9H999 370 aa16.96■□□□□ 0.31
LSM6-204ENST00000504181 ATP6V0A2Q9Y487 856 aa16.96■□□□□ 0.31
LSM6-204ENST00000504181 DUOX1Q9NRD9 1551 aa16.96■□□□□ 0.31
LSM6-204ENST00000504181 SCN9AQ15858 1988 aa16.96■□□□□ 0.31
LSM6-204ENST00000504181 DPP8Q6V1X1 898 aaPredicted RBP16.95■□□□□ 0.3
LSM6-204ENST00000504181 CDCA5Q96FF9 252 aa16.94■□□□□ 0.3
LSM6-204ENST00000504181 KDM3BQ7LBC6 1761 aa16.94■□□□□ 0.3
LSM6-204ENST00000504181 PSME4Q14997 1843 aa16.93■□□□□ 0.3
LSM6-204ENST00000504181 CEMIPQ8WUJ3 1361 aa16.93■□□□□ 0.3
LSM6-204ENST00000504181 SNRPA1P09661 255 aaKnown RBP16.93■□□□□ 0.3
LSM6-204ENST00000504181 GPTP24298 496 aa16.93■□□□□ 0.3
LSM6-204ENST00000504181 ABCC4O15439 1325 aa16.93■□□□□ 0.3
LSM6-204ENST00000504181 UBN2Q6ZU65 1347 aa16.93■□□□□ 0.3
LSM6-204ENST00000504181 IBTKQ9P2D0 1353 aaPredicted RBP16.92■□□□□ 0.3
LSM6-204ENST00000504181 PSMD14O00487 310 aa16.92■□□□□ 0.3
LSM6-204ENST00000504181 FKTNO75072 461 aa16.92■□□□□ 0.3
LSM6-204ENST00000504181 SULF1Q8IWU6 871 aa16.92■□□□□ 0.3
LSM6-204ENST00000504181 MPNDQ8N594 471 aa16.92■□□□□ 0.3
LSM6-204ENST00000504181 NGEFQ8N5V2 710 aa16.92■□□□□ 0.3
LSM6-204ENST00000504181 DPF2Q92785 391 aa16.92■□□□□ 0.3
LSM6-204ENST00000504181 GGA3Q9NZ52 723 aa16.92■□□□□ 0.3
LSM6-204ENST00000504181 NOM1Q5C9Z4 860 aaKnown RBP16.91■□□□□ 0.3
LSM6-204ENST00000504181 SUSD4Q5VX71 490 aa16.91■□□□□ 0.3
LSM6-204ENST00000504181 INTS3Q68E01 1043 aaKnown RBP16.91■□□□□ 0.3
LSM6-204ENST00000504181 GAS2L2Q8NHY3 880 aa16.91■□□□□ 0.3
LSM6-204ENST00000504181 ASTN2O75129 1339 aaPredicted RBP16.91■□□□□ 0.3
LSM6-204ENST00000504181 EN2P19622 333 aaPredicted RBP16.9■□□□□ 0.3
LSM6-204ENST00000504181 LAMB1P07942 1786 aa16.89■□□□□ 0.3
LSM6-204ENST00000504181 NTSR2O95665 410 aa16.89■□□□□ 0.29
LSM6-204ENST00000504181 KIF4BQ2VIQ3 1234 aa16.89■□□□□ 0.29
LSM6-204ENST00000504181 MOB2Q70IA6 237 aa16.89■□□□□ 0.29
LSM6-204ENST00000504181 R3HDMLQ9H3Y0 253 aa16.89■□□□□ 0.29
LSM6-204ENST00000504181 DIAPH1O60610 1272 aaKnown RBP16.88■□□□□ 0.29
LSM6-204ENST00000504181 MKRN3Q13064 507 aaKnown RBP16.88■□□□□ 0.29
LSM6-204ENST00000504181 SP8Q8IXZ3 490 aa16.88■□□□□ 0.29
LSM6-204ENST00000504181 NLRP3Q96P20 1036 aa16.88■□□□□ 0.29
LSM6-204ENST00000504181 TRIM17Q9Y577 477 aa16.88■□□□□ 0.29
LSM6-204ENST00000504181 MAP3K15Q6ZN16 1313 aa16.88■□□□□ 0.29
LSM6-204ENST00000504181 TM4SF4P48230 202 aa16.87■□□□□ 0.29
LSM6-204ENST00000504181 DBNDD1Q9H9R9 158 aa16.87■□□□□ 0.29
LSM6-204ENST00000504181 RANBP2P49792 3224 aaKnown RBP16.87■□□□□ 0.29
LSM6-204ENST00000504181 ERVV-1B6SEH8 477 aa16.86■□□□□ 0.29
LSM6-204ENST00000504181 UBE2Q2LH0YL09 131 aa16.86■□□□□ 0.29
LSM6-204ENST00000504181 FKBP1BP68106 108 aa16.86■□□□□ 0.29
LSM6-204ENST00000504181 TTLL7Q6ZT98 887 aa16.86■□□□□ 0.29
LSM6-204ENST00000504181 OTUD5Q96G74 571 aa16.86■□□□□ 0.29
LSM6-204ENST00000504181 RPS12P25398 132 aaKnown RBP16.85■□□□□ 0.29
LSM6-204ENST00000504181 KIF6Q6ZMV9 814 aa16.85■□□□□ 0.29
LSM6-204ENST00000504181 OTOP1Q7RTM1 612 aa16.85■□□□□ 0.29
LSM6-204ENST00000504181 ZBTB3Q9H5J0 574 aa16.85■□□□□ 0.29
LSM6-204ENST00000504181 DLG5Q8TDM6 1919 aa16.85■□□□□ 0.29
LSM6-204ENST00000504181 H0YGN5 161 aa16.84■□□□□ 0.29
LSM6-204ENST00000504181 ANGEL2Q5VTE6 544 aaKnown RBP16.84■□□□□ 0.29
LSM6-204ENST00000504181 CHRDL2Q6WN34 429 aa16.84■□□□□ 0.29
LSM6-204ENST00000504181 KCNQ5Q9NR82 932 aa16.84■□□□□ 0.29
LSM6-204ENST00000504181 RIMBP2O15034 1052 aa16.83■□□□□ 0.28
LSM6-204ENST00000504181 U2SURPO15042 1029 aaKnown RBP16.83■□□□□ 0.28
LSM6-204ENST00000504181 BBOX1O75936 387 aa16.83■□□□□ 0.28
LSM6-204ENST00000504181 COL3A1P02461 1466 aaPredicted RBP16.83■□□□□ 0.28
LSM6-204ENST00000504181 SREBF2Q12772 1141 aa16.83■□□□□ 0.28
LSM6-204ENST00000504181 PPP1R42Q7Z4L9 355 aa16.83■□□□□ 0.28
LSM6-204ENST00000504181 ZNF34Q8IZ26 560 aa16.83■□□□□ 0.28
LSM6-204ENST00000504181 RTL9Q8NET4 1388 aa16.83■□□□□ 0.28
LSM6-204ENST00000504181 CFHR5Q9BXR6 569 aa16.83■□□□□ 0.28
LSM6-204ENST00000504181 KNSTRNQ9Y448 316 aa16.83■□□□□ 0.28
LSM6-204ENST00000504181 WASHC4Q2M389 1173 aa16.82■□□□□ 0.28
LSM6-204ENST00000504181 SCAF8Q9UPN6 1271 aaKnown RBP16.82■□□□□ 0.28
LSM6-204ENST00000504181 ECE2O60344 883 aa16.81■□□□□ 0.28
LSM6-204ENST00000504181 TTLL12Q14166 644 aaPredicted RBP16.81■□□□□ 0.28
LSM6-204ENST00000504181 RRP7AQ9Y3A4 280 aaKnown RBP16.81■□□□□ 0.28
LSM6-204ENST00000504181 MYL6BP14649 208 aa16.8■□□□□ 0.28
LSM6-204ENST00000504181 SCARF1Q14162 830 aa16.8■□□□□ 0.28
LSM6-204ENST00000504181 DOK7Q18PE1 504 aa16.8■□□□□ 0.28
LSM6-204ENST00000504181 MCM10Q7L590 875 aa16.8■□□□□ 0.28
LSM6-204ENST00000504181 PTPN22Q9Y2R2 807 aa16.8■□□□□ 0.28
LSM6-204ENST00000504181 NPM3O75607 178 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms