RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 AKAP4Q5JQC9 854 aa19.02■□□□□ 0.64
PCDHA1-203ENST00000504120 KSR2Q6VAB6 950 aa19.02■□□□□ 0.64
PCDHA1-203ENST00000504120 ALS2CR12Q96Q35 445 aa19.02■□□□□ 0.64
PCDHA1-203ENST00000504120 RBM27Q9P2N5 1060 aaKnown RBP19.02■□□□□ 0.64
PCDHA1-203ENST00000504120 TARBP1Q13395 1621 aaKnown RBP19.02■□□□□ 0.64
PCDHA1-203ENST00000504120 KLF18A0A0U1RQI7 1052 aa19.02■□□□□ 0.63
PCDHA1-203ENST00000504120 GRM8O00222 908 aa19.02■□□□□ 0.63
PCDHA1-203ENST00000504120 RBM25P49756 843 aaKnown RBP19.02■□□□□ 0.63
PCDHA1-203ENST00000504120 XAGE3Q8WTP9 111 aa19.02■□□□□ 0.63
PCDHA1-203ENST00000504120 SNX21Q969T3 373 aa19.02■□□□□ 0.63
PCDHA1-203ENST00000504120 CCDC178Q5BJE1 867 aa19.01■□□□□ 0.63
PCDHA1-203ENST00000504120 C8orf58Q8NAV2 365 aa19.01■□□□□ 0.63
PCDHA1-203ENST00000504120 GSTO1P78417 241 aa19.01■□□□□ 0.63
PCDHA1-203ENST00000504120 RBM8AQ9Y5S9 174 aaKnown RBP19.01■□□□□ 0.63
PCDHA1-203ENST00000504120 FBLN1P23142 703 aa19.01■□□□□ 0.63
PCDHA1-203ENST00000504120 WTAPQ15007 396 aa19.01■□□□□ 0.63
PCDHA1-203ENST00000504120 NGLY1Q96IV0 654 aa19.01■□□□□ 0.63
PCDHA1-203ENST00000504120 CNNM2Q9H8M5 875 aa19.01■□□□□ 0.63
PCDHA1-203ENST00000504120 CCDC40Q4G0X9 1142 aa19.01■□□□□ 0.63
PCDHA1-203ENST00000504120 MCMDC2Q4G0Z9 681 aa19.01■□□□□ 0.63
PCDHA1-203ENST00000504120 CEP170Q5SW79 1584 aa19.01■□□□□ 0.63
PCDHA1-203ENST00000504120 NBPF7P0C2Y1 421 aaPredicted RBP19■□□□□ 0.63
PCDHA1-203ENST00000504120 IDEP14735 1019 aa19■□□□□ 0.63
PCDHA1-203ENST00000504120 STXBP4Q6ZWJ1 553 aa19■□□□□ 0.63
PCDHA1-203ENST00000504120 KCNG4Q8TDN1 519 aa19■□□□□ 0.63
PCDHA1-203ENST00000504120 ERICH4A6NGS2 130 aa19■□□□□ 0.63
PCDHA1-203ENST00000504120 HLA-DOAP06340 250 aa19■□□□□ 0.63
PCDHA1-203ENST00000504120 IL15P40933 162 aaPredicted RBP19■□□□□ 0.63
PCDHA1-203ENST00000504120 COPS6Q7L5N1 327 aa19■□□□□ 0.63
PCDHA1-203ENST00000504120 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19■□□□□ 0.63
PCDHA1-203ENST00000504120 RMND1Q9NWS8 449 aa19■□□□□ 0.63
PCDHA1-203ENST00000504120 ZBTB43O43298 467 aa19■□□□□ 0.63
PCDHA1-203ENST00000504120 SNW1Q13573 536 aaKnown RBP19■□□□□ 0.63
PCDHA1-203ENST00000504120 NAA15Q9BXJ9 866 aaKnown RBP19■□□□□ 0.63
PCDHA1-203ENST00000504120 UHRF1BP1Q6BDS2 1440 aa18.99■□□□□ 0.63
PCDHA1-203ENST00000504120 SYKP43405 635 aa18.99■□□□□ 0.63
PCDHA1-203ENST00000504120 PANK2Q9BZ23 570 aa18.99■□□□□ 0.63
PCDHA1-203ENST00000504120 NECAB1Q8N987 351 aa18.99■□□□□ 0.63
PCDHA1-203ENST00000504120 TESK2Q96S53 571 aa18.99■□□□□ 0.63
PCDHA1-203ENST00000504120 EIF4A2Q14240 407 aaKnown RBP18.99■□□□□ 0.63
PCDHA1-203ENST00000504120 ATP2B3Q16720 1220 aa18.99■□□□□ 0.63
PCDHA1-203ENST00000504120 DYDC1Q8WWB3 177 aa18.99■□□□□ 0.63
PCDHA1-203ENST00000504120 JARID2Q92833 1246 aaPredicted RBP18.99■□□□□ 0.63
PCDHA1-203ENST00000504120 ZCRB1Q8TBF4 217 aaKnown RBP18.99■□□□□ 0.63
PCDHA1-203ENST00000504120 SCLT1Q96NL6 688 aa18.99■□□□□ 0.63
PCDHA1-203ENST00000504120 CHRNA2Q15822 529 aa18.98■□□□□ 0.63
PCDHA1-203ENST00000504120 CABP5Q9NP86 173 aa18.98■□□□□ 0.63
PCDHA1-203ENST00000504120 ESR2Q92731 530 aa18.98■□□□□ 0.63
PCDHA1-203ENST00000504120 PLCD4Q9BRC7 762 aa18.98■□□□□ 0.63
PCDHA1-203ENST00000504120 TTC41PQ6P2S7 1318 aa18.98■□□□□ 0.63
PCDHA1-203ENST00000504120 HCLS1P14317 486 aaPredicted RBP18.98■□□□□ 0.63
PCDHA1-203ENST00000504120 IFFO1Q0D2I5 559 aa18.98■□□□□ 0.63
PCDHA1-203ENST00000504120 CCDC91Q7Z6B0 441 aa18.98■□□□□ 0.63
PCDHA1-203ENST00000504120 RAB11FIP4Q86YS3 637 aa18.98■□□□□ 0.63
PCDHA1-203ENST00000504120 MAST1Q9Y2H9 1570 aa18.98■□□□□ 0.63
PCDHA1-203ENST00000504120 VAT1LQ9HCJ6 419 aa18.97■□□□□ 0.63
PCDHA1-203ENST00000504120 GIMAP6Q6P9H5 292 aa18.97■□□□□ 0.63
PCDHA1-203ENST00000504120 POLKQ9UBT6 870 aa18.97■□□□□ 0.63
PCDHA1-203ENST00000504120 ALG1Q9BT22 464 aa18.97■□□□□ 0.63
PCDHA1-203ENST00000504120 PAXBP1Q9Y5B6 917 aa18.97■□□□□ 0.63
PCDHA1-203ENST00000504120 LMBR1LQ6UX01 489 aa18.96■□□□□ 0.63
PCDHA1-203ENST00000504120 ATP7AQ04656 1500 aa18.96■□□□□ 0.63
PCDHA1-203ENST00000504120 TCERG1LQ5VWI1 586 aa18.96■□□□□ 0.63
PCDHA1-203ENST00000504120 GSTTP1A0A1W2PQM5 241 aa18.96■□□□□ 0.63
PCDHA1-203ENST00000504120 EHBP1Q8NDI1 1231 aa18.96■□□□□ 0.63
PCDHA1-203ENST00000504120 LINS1Q8NG48 757 aa18.96■□□□□ 0.63
PCDHA1-203ENST00000504120 MAP2K1Q02750 393 aaPredicted RBP18.95■□□□□ 0.62
PCDHA1-203ENST00000504120 ZGPATQ8N5A5 531 aaKnown RBP18.95■□□□□ 0.62
PCDHA1-203ENST00000504120 MRPS27Q92552 414 aaKnown RBP18.95■□□□□ 0.62
PCDHA1-203ENST00000504120 PRIMPOLQ96LW4 560 aa18.95■□□□□ 0.62
PCDHA1-203ENST00000504120 DCTPP1Q9H773 170 aa18.95■□□□□ 0.62
PCDHA1-203ENST00000504120 CCDC113Q9H0I3 377 aa18.95■□□□□ 0.62
PCDHA1-203ENST00000504120 TAOK3Q9H2K8 898 aa18.95■□□□□ 0.62
PCDHA1-203ENST00000504120 CNPY2Q9Y2B0 182 aa18.95■□□□□ 0.62
PCDHA1-203ENST00000504120 DMRT2Q9Y5R5 561 aa18.95■□□□□ 0.62
PCDHA1-203ENST00000504120 FLT4P35916 1363 aa18.95■□□□□ 0.62
PCDHA1-203ENST00000504120 CCDC171Q6TFL3 1326 aa18.95■□□□□ 0.62
PCDHA1-203ENST00000504120 GCOM1H8Y6P7 765 aaPredicted RBP18.95■□□□□ 0.62
PCDHA1-203ENST00000504120 N4BP3O15049 544 aa18.95■□□□□ 0.62
PCDHA1-203ENST00000504120 MYZAPP0CAP1 466 aa18.95■□□□□ 0.62
PCDHA1-203ENST00000504120 CYP7A1P22680 504 aa18.95■□□□□ 0.62
PCDHA1-203ENST00000504120 DNA2P51530 1060 aa18.95■□□□□ 0.62
PCDHA1-203ENST00000504120 RTN1Q16799 776 aa18.95■□□□□ 0.62
PCDHA1-203ENST00000504120 NBPF6Q5VWK0 638 aa18.95■□□□□ 0.62
PCDHA1-203ENST00000504120 USP48Q86UV5 1035 aa18.95■□□□□ 0.62
PCDHA1-203ENST00000504120 NBPF5PQ86XG9 351 aaPredicted RBP18.95■□□□□ 0.62
PCDHA1-203ENST00000504120 NBPF4Q96M43 638 aa18.95■□□□□ 0.62
PCDHA1-203ENST00000504120 CTAGE1Q96RT6 745 aa18.95■□□□□ 0.62
PCDHA1-203ENST00000504120 PIK3C2GO75747 1445 aa18.95■□□□□ 0.62
PCDHA1-203ENST00000504120 RFC4P35249 363 aa18.94■□□□□ 0.62
PCDHA1-203ENST00000504120 EXOC1Q9NV70 894 aa18.94■□□□□ 0.62
PCDHA1-203ENST00000504120 PPFIA3O75145 1194 aa18.94■□□□□ 0.62
PCDHA1-203ENST00000504120 GNAQP50148 359 aa18.94■□□□□ 0.62
PCDHA1-203ENST00000504120 CBX1P83916 185 aa18.94■□□□□ 0.62
PCDHA1-203ENST00000504120 CEP135Q66GS9 1140 aa18.94■□□□□ 0.62
PCDHA1-203ENST00000504120 ISM2Q6H9L7 571 aa18.94■□□□□ 0.62
PCDHA1-203ENST00000504120 FAM200AQ8TCP9 573 aa18.94■□□□□ 0.62
PCDHA1-203ENST00000504120 SLC4A4Q9Y6R1 1079 aa18.94■□□□□ 0.62
PCDHA1-203ENST00000504120 F13A1P00488 732 aa18.94■□□□□ 0.62
PCDHA1-203ENST00000504120 C8orf34Q49A92 452 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms