RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 IGHDP01880 384 aa25.43■■□□□ 1.66
CDC42SE2-206ENST00000503291 HDAC1Q13547 482 aaPredicted RBP25.43■■□□□ 1.66
CDC42SE2-206ENST00000503291 SSH3Q8TE77 659 aa25.43■■□□□ 1.66
CDC42SE2-206ENST00000503291 HMMRO75330 724 aa25.42■■□□□ 1.66
CDC42SE2-206ENST00000503291 POLD1P28340 1107 aa25.42■■□□□ 1.66
CDC42SE2-206ENST00000503291 SF3B3Q15393 1217 aaKnown RBP25.42■■□□□ 1.66
CDC42SE2-206ENST00000503291 BRIP1Q9BX63 1249 aa25.42■■□□□ 1.66
CDC42SE2-206ENST00000503291 RWDD1Q9H446 243 aaPredicted RBP25.42■■□□□ 1.66
CDC42SE2-206ENST00000503291 GREM2Q9H772 168 aa25.42■■□□□ 1.66
CDC42SE2-206ENST00000503291 POLA2Q14181 598 aa25.42■■□□□ 1.66
CDC42SE2-206ENST00000503291 FAM161AQ3B820 660 aa25.41■■□□□ 1.66
CDC42SE2-206ENST00000503291 CCDC152Q4G0S7 254 aa25.41■■□□□ 1.66
CDC42SE2-206ENST00000503291 RIC1Q4ADV7 1423 aa25.41■■□□□ 1.66
CDC42SE2-206ENST00000503291 CCDC57Q2TAC2 916 aa25.4■■□□□ 1.66
CDC42SE2-206ENST00000503291 SGIP1Q9BQI5 828 aa25.4■■□□□ 1.66
CDC42SE2-206ENST00000503291 TNRC6CQ9HCJ0 1690 aaKnown RBP25.39■■□□□ 1.65
CDC42SE2-206ENST00000503291 ITGA6P23229 1130 aa25.39■■□□□ 1.65
CDC42SE2-206ENST00000503291 RFX5P48382 616 aaPredicted RBP25.39■■□□□ 1.65
CDC42SE2-206ENST00000503291 IFIT5Q13325 482 aaKnown RBP25.39■■□□□ 1.65
CDC42SE2-206ENST00000503291 KLRG2A4D1S0 409 aaPredicted RBP25.38■■□□□ 1.65
CDC42SE2-206ENST00000503291 PTGER2P43116 358 aa25.38■■□□□ 1.65
CDC42SE2-206ENST00000503291 KLHDC4Q8TBB5 520 aa25.37■■□□□ 1.65
CDC42SE2-206ENST00000503291 PDE6BP35913 854 aa25.37■■□□□ 1.65
CDC42SE2-206ENST00000503291 CRY2Q49AN0 593 aa25.37■■□□□ 1.65
CDC42SE2-206ENST00000503291 SEC31BQ9NQW1 1179 aa25.37■■□□□ 1.65
CDC42SE2-206ENST00000503291 ANKRD31Q8N7Z5 1873 aa25.36■■□□□ 1.65
CDC42SE2-206ENST00000503291 RTL9Q8NET4 1388 aa25.36■■□□□ 1.65
CDC42SE2-206ENST00000503291 ANKRD18BA2A2Z9 1011 aa25.36■■□□□ 1.65
CDC42SE2-206ENST00000503291 PTPN12Q05209 780 aaKnown RBP25.36■■□□□ 1.65
CDC42SE2-206ENST00000503291 SPON1Q9HCB6 807 aa25.36■■□□□ 1.65
CDC42SE2-206ENST00000503291 PA2G4Q9UQ80 394 aaKnown RBP25.36■■□□□ 1.65
CDC42SE2-206ENST00000503291 DCTPP1Q9H773 170 aa25.36■■□□□ 1.65
CDC42SE2-206ENST00000503291 ZNF594Q96JF6 807 aaPredicted RBP25.35■■□□□ 1.65
CDC42SE2-206ENST00000503291 SURF6O75683 361 aaKnown RBP25.34■■□□□ 1.65
CDC42SE2-206ENST00000503291 COPRSQ9NQ92 184 aa25.34■■□□□ 1.65
CDC42SE2-206ENST00000503291 RPGRQ92834 1020 aaKnown RBP25.34■■□□□ 1.65
CDC42SE2-206ENST00000503291 TAF7LQ5H9L4 462 aa25.33■■□□□ 1.65
CDC42SE2-206ENST00000503291 DDX46Q7L014 1031 aaKnown RBP25.33■■□□□ 1.65
CDC42SE2-206ENST00000503291 EXOC6BQ9Y2D4 811 aa25.33■■□□□ 1.65
CDC42SE2-206ENST00000503291 C10orf71Q711Q0 1435 aa25.33■■□□□ 1.65
CDC42SE2-206ENST00000503291 SRGNP10124 158 aa25.32■■□□□ 1.64
CDC42SE2-206ENST00000503291 SIL1Q9H173 461 aa25.32■■□□□ 1.64
CDC42SE2-206ENST00000503291 NOP58Q9Y2X3 529 aaKnown RBP25.32■■□□□ 1.64
CDC42SE2-206ENST00000503291 KDM2BQ8NHM5 1336 aa25.32■■□□□ 1.64
CDC42SE2-206ENST00000503291 GCC1Q96CN9 775 aa25.31■■□□□ 1.64
CDC42SE2-206ENST00000503291 CDC5LQ99459 802 aaKnown RBP25.31■■□□□ 1.64
CDC42SE2-206ENST00000503291 HOXA10P31260 410 aaPredicted RBP25.3■■□□□ 1.64
CDC42SE2-206ENST00000503291 CENPQQ7L2Z9 268 aaPredicted RBP25.3■■□□□ 1.64
CDC42SE2-206ENST00000503291 SMC5Q8IY18 1101 aa25.3■■□□□ 1.64
CDC42SE2-206ENST00000503291 H0YIN7 160 aa25.3■■□□□ 1.64
CDC42SE2-206ENST00000503291 C2CD5Q86YS7 1000 aa25.3■■□□□ 1.64
CDC42SE2-206ENST00000503291 CELF1Q92879 486 aaKnown RBP25.3■■□□□ 1.64
CDC42SE2-206ENST00000503291 RBM17Q96I25 401 aaKnown RBP25.3■■□□□ 1.64
CDC42SE2-206ENST00000503291 TAF1P21675 1872 aa25.3■■□□□ 1.64
CDC42SE2-206ENST00000503291 G3BP1Q13283 466 aaKnown RBP eCLIP25.29■■□□□ 1.64
CDC42SE2-206ENST00000503291 NPR1P16066 1061 aa25.29■■□□□ 1.64
CDC42SE2-206ENST00000503291 RPS8P62241 208 aaKnown RBP25.29■■□□□ 1.64
CDC42SE2-206ENST00000503291 LDHAL6AQ6ZMR3 332 aa25.29■■□□□ 1.64
CDC42SE2-206ENST00000503291 ANKRD18AQ8IVF6 992 aa25.29■■□□□ 1.64
CDC42SE2-206ENST00000503291 PUS3Q9BZE2 481 aaKnown RBP25.29■■□□□ 1.64
CDC42SE2-206ENST00000503291 PDZRN3Q9UPQ7 1066 aa25.29■■□□□ 1.64
CDC42SE2-206ENST00000503291 CHRNA5P30532 468 aa25.28■■□□□ 1.64
CDC42SE2-206ENST00000503291 IGHMBP2P38935 993 aaKnown RBP25.28■■□□□ 1.64
CDC42SE2-206ENST00000503291 LRRC24Q50LG9 513 aa25.28■■□□□ 1.64
CDC42SE2-206ENST00000503291 MPHOSPH8Q99549 860 aa25.28■■□□□ 1.64
CDC42SE2-206ENST00000503291 EYA2O00167 538 aa25.27■■□□□ 1.64
CDC42SE2-206ENST00000503291 APBB1O00213 710 aa25.27■■□□□ 1.64
CDC42SE2-206ENST00000503291 GRAPQ13588 217 aa25.27■■□□□ 1.64
CDC42SE2-206ENST00000503291 HSP90AB4PQ58FF6 505 aa25.27■■□□□ 1.64
CDC42SE2-206ENST00000503291 GRAPLQ8TC17 118 aaPredicted RBP25.27■■□□□ 1.64
CDC42SE2-206ENST00000503291 MASTLQ96GX5 879 aa25.27■■□□□ 1.64
CDC42SE2-206ENST00000503291 CRAMP1Q96RY5 1269 aa25.27■■□□□ 1.64
CDC42SE2-206ENST00000503291 PPP1R1BQ9UD71 204 aaPredicted RBP25.27■■□□□ 1.64
CDC42SE2-206ENST00000503291 COL4A1P02462 1669 aa25.27■■□□□ 1.64
CDC42SE2-206ENST00000503291 OS9Q13438 667 aaPredicted RBP25.27■■□□□ 1.64
CDC42SE2-206ENST00000503291 FBXO3Q9UK99 471 aa25.27■■□□□ 1.64
CDC42SE2-206ENST00000503291 ATG9AQ7Z3C6 839 aa25.26■■□□□ 1.63
CDC42SE2-206ENST00000503291 CNNM1Q9NRU3 951 aa25.26■■□□□ 1.63
CDC42SE2-206ENST00000503291 KIF13BQ9NQT8 1826 aa25.26■■□□□ 1.63
CDC42SE2-206ENST00000503291 RAB11FIP3O75154 756 aa25.25■■□□□ 1.63
CDC42SE2-206ENST00000503291 CIAO1O76071 339 aa25.25■■□□□ 1.63
CDC42SE2-206ENST00000503291 ZNF622Q969S3 477 aaKnown RBP eCLIP25.25■■□□□ 1.63
CDC42SE2-206ENST00000503291 COL11A2P13942 1736 aaPredicted RBP25.25■■□□□ 1.63
CDC42SE2-206ENST00000503291 KLHL34Q8N239 644 aa25.25■■□□□ 1.63
CDC42SE2-206ENST00000503291 RIPOR2Q9Y4F9 1068 aa25.25■■□□□ 1.63
CDC42SE2-206ENST00000503291 CD2APQ9Y5K6 639 aa25.25■■□□□ 1.63
CDC42SE2-206ENST00000503291 ALDH1B1P30837 517 aa25.24■■□□□ 1.63
CDC42SE2-206ENST00000503291 TGFB2P61812 414 aa25.24■■□□□ 1.63
CDC42SE2-206ENST00000503291 STYK1Q6J9G0 422 aa25.24■■□□□ 1.63
CDC42SE2-206ENST00000503291 BSDC1Q9NW68 430 aaPredicted RBP25.24■■□□□ 1.63
CDC42SE2-206ENST00000503291 A0A0G2JLW4 131 aa25.24■■□□□ 1.63
CDC42SE2-206ENST00000503291 SASH1O94885 1247 aa25.24■■□□□ 1.63
CDC42SE2-206ENST00000503291 IL15P40933 162 aaPredicted RBP25.24■■□□□ 1.63
CDC42SE2-206ENST00000503291 ANKRD45Q5TZF3 282 aa25.24■■□□□ 1.63
CDC42SE2-206ENST00000503291 ERC1Q8IUD2 1116 aa25.23■■□□□ 1.63
CDC42SE2-206ENST00000503291 BBOX1O75936 387 aa25.22■■□□□ 1.63
CDC42SE2-206ENST00000503291 DPEP1P16444 411 aa25.22■■□□□ 1.63
CDC42SE2-206ENST00000503291 RHPN1Q8TCX5 695 aa25.22■■□□□ 1.63
CDC42SE2-206ENST00000503291 KIF1BPQ96EK5 621 aa25.22■■□□□ 1.63
CDC42SE2-206ENST00000503291 LRRCC1Q9C099 1032 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms