RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 GPATCH11Q8N954 259 aa19.84■□□□□ 0.77
HMGXB3-201ENST00000502717 CCDC57Q2TAC2 916 aa19.83■□□□□ 0.77
HMGXB3-201ENST00000502717 RSPH14Q9UHP6 348 aa19.83■□□□□ 0.77
HMGXB3-201ENST00000502717 FBLN1P23142 703 aa19.83■□□□□ 0.77
HMGXB3-201ENST00000502717 SPA17Q15506 151 aa19.83■□□□□ 0.77
HMGXB3-201ENST00000502717 NUP133Q8WUM0 1156 aa19.83■□□□□ 0.77
HMGXB3-201ENST00000502717 AOX1Q06278 1338 aa19.83■□□□□ 0.76
HMGXB3-201ENST00000502717 ATL3Q6DD88 541 aa19.83■□□□□ 0.76
HMGXB3-201ENST00000502717 NUP88Q99567 741 aaPredicted RBP19.83■□□□□ 0.76
HMGXB3-201ENST00000502717 CTAGE15A4D2H0 777 aa19.83■□□□□ 0.76
HMGXB3-201ENST00000502717 CTAGE8P0CG41 777 aa19.83■□□□□ 0.76
HMGXB3-201ENST00000502717 ISM2Q6H9L7 571 aa19.83■□□□□ 0.76
HMGXB3-201ENST00000502717 CTAGE6Q86UF2 777 aa19.83■□□□□ 0.76
HMGXB3-201ENST00000502717 CTAGE4Q8IX94 777 aa19.83■□□□□ 0.76
HMGXB3-201ENST00000502717 SOS1Q07889 1333 aaPredicted RBP19.83■□□□□ 0.76
HMGXB3-201ENST00000502717 PI4KAP2A4QPH2 592 aa19.82■□□□□ 0.76
HMGXB3-201ENST00000502717 AMOTQ4VCS5 1084 aa19.82■□□□□ 0.76
HMGXB3-201ENST00000502717 KANK3Q6NY19 840 aa19.82■□□□□ 0.76
HMGXB3-201ENST00000502717 PI4KAP1Q8N8J0 262 aa19.82■□□□□ 0.76
HMGXB3-201ENST00000502717 USP16Q9Y5T5 823 aa19.82■□□□□ 0.76
HMGXB3-201ENST00000502717 MSH6P52701 1360 aa19.82■□□□□ 0.76
HMGXB3-201ENST00000502717 TUBBP07437 444 aa19.82■□□□□ 0.76
HMGXB3-201ENST00000502717 ELF2Q15723 593 aa19.82■□□□□ 0.76
HMGXB3-201ENST00000502717 CREB3L3Q68CJ9 461 aa19.82■□□□□ 0.76
HMGXB3-201ENST00000502717 IFNKQ9P0W0 207 aa19.82■□□□□ 0.76
HMGXB3-201ENST00000502717 RTL1A6NKG5 1358 aa19.81■□□□□ 0.76
HMGXB3-201ENST00000502717 MNAT1P51948 309 aa19.81■□□□□ 0.76
HMGXB3-201ENST00000502717 IFIT1P09914 478 aaKnown RBP19.81■□□□□ 0.76
HMGXB3-201ENST00000502717 ZC3H6P61129 1189 aaKnown RBP19.81■□□□□ 0.76
HMGXB3-201ENST00000502717 HYPKQ9NX55 129 aa19.81■□□□□ 0.76
HMGXB3-201ENST00000502717 CD2BP2O95400 341 aaKnown RBP19.81■□□□□ 0.76
HMGXB3-201ENST00000502717 LMOD1P29536 600 aaPredicted RBP19.81■□□□□ 0.76
HMGXB3-201ENST00000502717 CDK5RAP3Q96JB5 506 aa19.81■□□□□ 0.76
HMGXB3-201ENST00000502717 SNX14Q9Y5W7 946 aa19.81■□□□□ 0.76
HMGXB3-201ENST00000502717 TTC21AQ8NDW8 1320 aa19.81■□□□□ 0.76
HMGXB3-201ENST00000502717 C10orf67Q8IYJ2 551 aa19.8■□□□□ 0.76
HMGXB3-201ENST00000502717 CNNM1Q9NRU3 951 aa19.8■□□□□ 0.76
HMGXB3-201ENST00000502717 PAFAH1B1P43034 410 aa19.8■□□□□ 0.76
HMGXB3-201ENST00000502717 PHAXQ9H814 394 aaKnown RBP19.8■□□□□ 0.76
HMGXB3-201ENST00000502717 PPIP5K1Q6PFW1 1433 aa19.8■□□□□ 0.76
HMGXB3-201ENST00000502717 CCDC175P0C221 793 aa19.8■□□□□ 0.76
HMGXB3-201ENST00000502717 Q6ZUG5 572 aa19.8■□□□□ 0.76
HMGXB3-201ENST00000502717 UBAC1Q9BSL1 405 aa19.8■□□□□ 0.76
HMGXB3-201ENST00000502717 A0A1W2PP64 1363 aa19.79■□□□□ 0.76
HMGXB3-201ENST00000502717 CCDC196A0A1B0GTZ2 297 aa19.79■□□□□ 0.76
HMGXB3-201ENST00000502717 TTC31Q49AM3 519 aaPredicted RBP19.79■□□□□ 0.76
HMGXB3-201ENST00000502717 ABCC4O15439 1325 aa19.79■□□□□ 0.76
HMGXB3-201ENST00000502717 RAD50Q92878 1312 aa19.79■□□□□ 0.76
HMGXB3-201ENST00000502717 ZFP91Q96JP5 570 aaPredicted RBP19.79■□□□□ 0.76
HMGXB3-201ENST00000502717 IMPACTQ9P2X3 320 aa19.79■□□□□ 0.76
HMGXB3-201ENST00000502717 EVCP57679 992 aa19.79■□□□□ 0.76
HMGXB3-201ENST00000502717 KRBA2Q6ZNG9 492 aa19.79■□□□□ 0.76
HMGXB3-201ENST00000502717 MYO5CQ9NQX4 1742 aa19.79■□□□□ 0.76
HMGXB3-201ENST00000502717 ZNF213O14771 459 aa19.78■□□□□ 0.76
HMGXB3-201ENST00000502717 FOXO3O43524 673 aa19.78■□□□□ 0.76
HMGXB3-201ENST00000502717 USO1O60763 962 aaKnown RBP19.78■□□□□ 0.76
HMGXB3-201ENST00000502717 HSPA4P34932 840 aa19.78■□□□□ 0.76
HMGXB3-201ENST00000502717 TAF4BQ92750 862 aa19.78■□□□□ 0.76
HMGXB3-201ENST00000502717 FAM160A1Q05DH4 1040 aa19.78■□□□□ 0.76
HMGXB3-201ENST00000502717 VPS18Q9P253 973 aa19.78■□□□□ 0.76
HMGXB3-201ENST00000502717 SGSM2O43147 1006 aa19.78■□□□□ 0.76
HMGXB3-201ENST00000502717 NMIQ13287 307 aaPredicted RBP19.78■□□□□ 0.76
HMGXB3-201ENST00000502717 EHBP1Q8NDI1 1231 aa19.78■□□□□ 0.76
HMGXB3-201ENST00000502717 AKAP2Q9Y2D5 859 aa19.77■□□□□ 0.76
HMGXB3-201ENST00000502717 MAP3K2Q9Y2U5 619 aa19.77■□□□□ 0.76
HMGXB3-201ENST00000502717 SSH2Q76I76 1423 aa19.77■□□□□ 0.76
HMGXB3-201ENST00000502717 YTHDC2Q9H6S0 1430 aaKnown RBP19.77■□□□□ 0.76
HMGXB3-201ENST00000502717 PTPRTO14522 1441 aa19.77■□□□□ 0.76
HMGXB3-201ENST00000502717 SPTLC2O15270 562 aa19.77■□□□□ 0.75
HMGXB3-201ENST00000502717 RNF187Q5TA31 235 aaPredicted RBP19.77■□□□□ 0.75
HMGXB3-201ENST00000502717 WDHD1O75717 1129 aaPredicted RBP19.76■□□□□ 0.75
HMGXB3-201ENST00000502717 CKAP4Q07065 602 aaKnown RBP19.76■□□□□ 0.75
HMGXB3-201ENST00000502717 NBPF11Q86T75 865 aa19.76■□□□□ 0.75
HMGXB3-201ENST00000502717 TANGO6Q9C0B7 1094 aa19.76■□□□□ 0.75
HMGXB3-201ENST00000502717 KRT24Q2M2I5 525 aa19.76■□□□□ 0.75
HMGXB3-201ENST00000502717 CTAGE1Q96RT6 745 aa19.76■□□□□ 0.75
HMGXB3-201ENST00000502717 CPA1P15085 419 aa19.76■□□□□ 0.75
HMGXB3-201ENST00000502717 HSP90AB2PQ58FF8 381 aa19.76■□□□□ 0.75
HMGXB3-201ENST00000502717 HDXQ7Z353 690 aa19.76■□□□□ 0.75
HMGXB3-201ENST00000502717 CTAGE9A4FU28 777 aa19.75■□□□□ 0.75
HMGXB3-201ENST00000502717 SSRP1Q08945 709 aaKnown RBP19.75■□□□□ 0.75
HMGXB3-201ENST00000502717 NEO1Q92859 1461 aa19.75■□□□□ 0.75
HMGXB3-201ENST00000502717 LIG1P18858 919 aa19.75■□□□□ 0.75
HMGXB3-201ENST00000502717 IARSP41252 1262 aaKnown RBP19.75■□□□□ 0.75
HMGXB3-201ENST00000502717 LEO1Q8WVC0 666 aaPredicted RBP19.75■□□□□ 0.75
HMGXB3-201ENST00000502717 MYD88Q99836 296 aa19.75■□□□□ 0.75
HMGXB3-201ENST00000502717 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.75■□□□□ 0.75
HMGXB3-201ENST00000502717 SAMD9LQ8IVG5 1584 aa19.75■□□□□ 0.75
HMGXB3-201ENST00000502717 A0A1B0GUL7 405 aa19.75■□□□□ 0.75
HMGXB3-201ENST00000502717 ALDH1L1O75891 902 aa19.75■□□□□ 0.75
HMGXB3-201ENST00000502717 TDO2P48775 406 aa19.75■□□□□ 0.75
HMGXB3-201ENST00000502717 CT47A1Q5JQC4 288 aaPredicted RBP19.74■□□□□ 0.75
HMGXB3-201ENST00000502717 FKBP15Q5T1M5 1219 aa19.74■□□□□ 0.75
HMGXB3-201ENST00000502717 ANKRD24Q8TF21 1146 aa19.74■□□□□ 0.75
HMGXB3-201ENST00000502717 AIDAQ96BJ3 306 aa19.74■□□□□ 0.75
HMGXB3-201ENST00000502717 UTP14AQ9BVJ6 771 aaKnown RBP19.74■□□□□ 0.75
HMGXB3-201ENST00000502717 KRI1Q8N9T8 703 aaKnown RBP19.74■□□□□ 0.75
HMGXB3-201ENST00000502717 IPO4Q8TEX9 1081 aaKnown RBP19.74■□□□□ 0.75
HMGXB3-201ENST00000502717 SAMD1Q6SPF0 538 aaPredicted RBP19.74■□□□□ 0.75
HMGXB3-201ENST00000502717 LRRC2Q9BYS8 371 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms