RNA–Protein interactions for RNA: ENST00000498562.2

CUL4A-211, Transcript of cullin 4A, humanhuman

TSL 3

Gene CUL4A, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-211ENST00000498562 HYPKQ9NX55 129 aa33.65■■■□□ 2.98
CUL4A-211ENST00000498562 DUOX1Q9NRD9 1551 aa33.64■■■□□ 2.98
CUL4A-211ENST00000498562 EPS15P42566 896 aa33.64■■■□□ 2.98
CUL4A-211ENST00000498562 DPP8Q6V1X1 898 aaPredicted RBP33.63■■■□□ 2.97
CUL4A-211ENST00000498562 IFT57Q9NWB7 429 aa33.63■■■□□ 2.97
CUL4A-211ENST00000498562 MPNDQ8N594 471 aa33.62■■■□□ 2.97
CUL4A-211ENST00000498562 ATP5J2-PTCD1G3V325 749 aa33.61■■■□□ 2.97
CUL4A-211ENST00000498562 FAM89AQ96GI7 184 aa33.6■■■□□ 2.97
CUL4A-211ENST00000498562 ZNRF3Q9ULT6 936 aa33.6■■■□□ 2.97
CUL4A-211ENST00000498562 COL4A1P02462 1669 aa33.6■■■□□ 2.97
CUL4A-211ENST00000498562 GNAI1P63096 354 aa33.59■■■□□ 2.97
CUL4A-211ENST00000498562 KIAA2012Q0VF49 1180 aa33.59■■■□□ 2.97
CUL4A-211ENST00000498562 CXCL9Q07325 125 aa33.58■■■□□ 2.97
CUL4A-211ENST00000498562 TMC4Q7Z404 712 aa33.58■■■□□ 2.97
CUL4A-211ENST00000498562 CALD1Q05682 793 aaKnown RBP33.57■■■□□ 2.96
CUL4A-211ENST00000498562 USP50Q70EL3 339 aaPredicted RBP33.57■■■□□ 2.96
CUL4A-211ENST00000498562 VEGFBP49765 207 aa33.56■■■□□ 2.96
CUL4A-211ENST00000498562 TRIM28Q13263 835 aaKnown RBP33.56■■■□□ 2.96
CUL4A-211ENST00000498562 SF3B3Q15393 1217 aaKnown RBP33.56■■■□□ 2.96
CUL4A-211ENST00000498562 TNS4Q8IZW8 715 aa33.55■■■□□ 2.96
CUL4A-211ENST00000498562 PHAXQ9H814 394 aaKnown RBP33.55■■■□□ 2.96
CUL4A-211ENST00000498562 GPRC5DQ9NZD1 345 aa33.55■■■□□ 2.96
CUL4A-211ENST00000498562 CELF1Q92879 486 aaKnown RBP33.54■■■□□ 2.96
CUL4A-211ENST00000498562 TRPM7Q96QT4 1865 aa33.53■■■□□ 2.96
CUL4A-211ENST00000498562 RASSF10A6NK89 507 aa33.53■■■□□ 2.96
CUL4A-211ENST00000498562 ELL2O00472 640 aaPredicted RBP33.53■■■□□ 2.96
CUL4A-211ENST00000498562 RTL5Q5HYW3 569 aaPredicted RBP33.53■■■□□ 2.96
CUL4A-211ENST00000498562 ADARB2Q9NS39 739 aaKnown RBP33.53■■■□□ 2.96
CUL4A-211ENST00000498562 GOLGA2Q08379 1002 aa33.52■■■□□ 2.96
CUL4A-211ENST00000498562 CIAPIN1Q6FI81 312 aa33.52■■■□□ 2.96
CUL4A-211ENST00000498562 RIC3Q7Z5B4 369 aa33.52■■■□□ 2.96
CUL4A-211ENST00000498562 IRS4O14654 1257 aaPredicted RBP33.51■■■□□ 2.95
CUL4A-211ENST00000498562 GMPSP49915 693 aaPredicted RBP33.51■■■□□ 2.95
CUL4A-211ENST00000498562 C8orf58Q8NAV2 365 aa33.51■■■□□ 2.95
CUL4A-211ENST00000498562 CDHR2Q9BYE9 1310 aa33.51■■■□□ 2.95
CUL4A-211ENST00000498562 FMR1Q06787 632 aaKnown RBP eCLIP33.5■■■□□ 2.95
CUL4A-211ENST00000498562 YDJCA8MPS7 323 aa33.49■■■□□ 2.95
CUL4A-211ENST00000498562 RAD17O75943 681 aa33.49■■■□□ 2.95
CUL4A-211ENST00000498562 FOXN1O15353 648 aa33.48■■■□□ 2.95
CUL4A-211ENST00000498562 DEFB115Q30KQ5 88 aa33.48■■■□□ 2.95
CUL4A-211ENST00000498562 ZBTB38Q8NAP3 1195 aaPredicted RBP33.48■■■□□ 2.95
CUL4A-211ENST00000498562 MYD88Q99836 296 aa33.47■■■□□ 2.95
CUL4A-211ENST00000498562 ABT1Q9ULW3 272 aaKnown RBP33.47■■■□□ 2.95
CUL4A-211ENST00000498562 TNIP1Q15025 636 aa33.46■■■□□ 2.95
CUL4A-211ENST00000498562 CCDC184Q52MB2 194 aa33.46■■■□□ 2.95
CUL4A-211ENST00000498562 THSD7BQ9C0I4 1608 aa33.46■■■□□ 2.95
CUL4A-211ENST00000498562 TRAF5O00463 557 aa33.45■■■□□ 2.95
CUL4A-211ENST00000498562 NSFL1CQ9UNZ2 370 aaKnown RBP33.45■■■□□ 2.95
CUL4A-211ENST00000498562 GPSM2P81274 684 aa33.44■■■□□ 2.94
CUL4A-211ENST00000498562 WASHC4Q2M389 1173 aa33.44■■■□□ 2.94
CUL4A-211ENST00000498562 BCL2L13Q9BXK5 485 aa33.44■■■□□ 2.94
CUL4A-211ENST00000498562 TSPYL6Q8N831 410 aa33.43■■■□□ 2.94
CUL4A-211ENST00000498562 CCDC191Q8NCU4 936 aa33.43■■■□□ 2.94
CUL4A-211ENST00000498562 POLLQ9UGP5 575 aa33.43■■■□□ 2.94
CUL4A-211ENST00000498562 CCDC30Q5VVM6 783 aa33.42■■■□□ 2.94
CUL4A-211ENST00000498562 WBP1LQ9NX94 342 aa33.42■■■□□ 2.94
CUL4A-211ENST00000498562 PCCAP05165 728 aaPredicted RBP33.41■■■□□ 2.94
CUL4A-211ENST00000498562 RPS8P62241 208 aaKnown RBP33.41■■■□□ 2.94
CUL4A-211ENST00000498562 CST9Q5W186 159 aa33.41■■■□□ 2.94
CUL4A-211ENST00000498562 DBNDD1Q9H9R9 158 aa33.41■■■□□ 2.94
CUL4A-211ENST00000498562 WDR33Q9C0J8 1336 aaKnown RBP33.41■■■□□ 2.94
CUL4A-211ENST00000498562 TRPM4Q8TD43 1214 aa33.4■■■□□ 2.94
CUL4A-211ENST00000498562 AIDAQ96BJ3 306 aa33.4■■■□□ 2.94
CUL4A-211ENST00000498562 METTL22Q9BUU2 404 aaPredicted RBP33.4■■■□□ 2.94
CUL4A-211ENST00000498562 SEC31BQ9NQW1 1179 aa33.4■■■□□ 2.94
CUL4A-211ENST00000498562 PGAP2Q9UHJ9 254 aa33.4■■■□□ 2.94
CUL4A-211ENST00000498562 SHTN1A0MZ66 631 aa33.39■■■□□ 2.94
CUL4A-211ENST00000498562 C6orf229H3BNL8 230 aa33.39■■■□□ 2.94
CUL4A-211ENST00000498562 HSP90B1P14625 803 aaKnown RBP33.39■■■□□ 2.94
CUL4A-211ENST00000498562 HIRAP54198 1017 aaPredicted RBP33.39■■■□□ 2.94
CUL4A-211ENST00000498562 TSR2Q969E8 191 aaKnown RBP33.39■■■□□ 2.94
CUL4A-211ENST00000498562 CHMP4AQ9BY43 222 aa33.39■■■□□ 2.94
CUL4A-211ENST00000498562 CWC25Q9NXE8 425 aaPredicted RBP33.39■■■□□ 2.94
CUL4A-211ENST00000498562 PSMD14O00487 310 aa33.38■■■□□ 2.93
CUL4A-211ENST00000498562 RIMBP2O15034 1052 aa33.38■■■□□ 2.93
CUL4A-211ENST00000498562 CAPN15O75808 1086 aa33.38■■■□□ 2.93
CUL4A-211ENST00000498562 DDX58O95786 925 aaKnown RBP33.38■■■□□ 2.93
CUL4A-211ENST00000498562 CNOT7Q9UIV1 285 aaKnown RBP33.38■■■□□ 2.93
CUL4A-211ENST00000498562 CTCFP49711 727 aaPredicted RBP33.37■■■□□ 2.93
CUL4A-211ENST00000498562 CCDC27Q2M243 656 aa33.37■■■□□ 2.93
CUL4A-211ENST00000498562 TBC1D16Q8TBP0 767 aa33.37■■■□□ 2.93
CUL4A-211ENST00000498562 PRDM10Q9NQV6 1147 aa33.37■■■□□ 2.93
CUL4A-211ENST00000498562 ZBTB12Q9Y330 459 aaPredicted RBP33.37■■■□□ 2.93
CUL4A-211ENST00000498562 TLL2Q9Y6L7 1015 aa33.37■■■□□ 2.93
CUL4A-211ENST00000498562 PDE8AO60658 829 aa33.36■■■□□ 2.93
CUL4A-211ENST00000498562 MICALL2Q8IY33 904 aa33.36■■■□□ 2.93
CUL4A-211ENST00000498562 ZC3H15Q8WU90 426 aaKnown RBP33.36■■■□□ 2.93
CUL4A-211ENST00000498562 GPR101Q96P66 508 aaPredicted RBP33.36■■■□□ 2.93
CUL4A-211ENST00000498562 EYA3Q99504 573 aa33.36■■■□□ 2.93
CUL4A-211ENST00000498562 GLIS2Q9BZE0 524 aaPredicted RBP33.36■■■□□ 2.93
CUL4A-211ENST00000498562 PODXL2Q9NZ53 605 aa33.36■■■□□ 2.93
CUL4A-211ENST00000498562 ECE2O60344 883 aa33.35■■■□□ 2.93
CUL4A-211ENST00000498562 CCDC152Q4G0S7 254 aa33.35■■■□□ 2.93
CUL4A-211ENST00000498562 DPF2Q92785 391 aa33.35■■■□□ 2.93
CUL4A-211ENST00000498562 JARID2Q92833 1246 aaPredicted RBP33.35■■■□□ 2.93
CUL4A-211ENST00000498562 MAP3K2Q9Y2U5 619 aa33.35■■■□□ 2.93
CUL4A-211ENST00000498562 SCN9AQ15858 1988 aa33.34■■■□□ 2.93
CUL4A-211ENST00000498562 WWC1Q8IX03 1113 aa33.34■■■□□ 2.93
CUL4A-211ENST00000498562 CAPNS2Q96L46 248 aa33.34■■■□□ 2.93
CUL4A-211ENST00000498562 RTL9Q8NET4 1388 aa33.34■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms