RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 BLOC1S2Q6QNY1 142 aa23.43■■□□□ 1.34
NKX2-1-202ENST00000498187 NLRP2Q9NX02 1062 aa23.43■■□□□ 1.34
NKX2-1-202ENST00000498187 LARP1BQ659C4 914 aaKnown RBP23.43■■□□□ 1.34
NKX2-1-202ENST00000498187 TCEANC2Q96MN5 208 aa23.43■■□□□ 1.34
NKX2-1-202ENST00000498187 TAF6LQ9Y6J9 622 aa23.43■■□□□ 1.34
NKX2-1-202ENST00000498187 PHKG2P15735 406 aa23.42■■□□□ 1.34
NKX2-1-202ENST00000498187 PLCB2Q00722 1185 aa23.42■■□□□ 1.34
NKX2-1-202ENST00000498187 ZNF589Q86UQ0 364 aaPredicted RBP23.42■■□□□ 1.34
NKX2-1-202ENST00000498187 ZNF496Q96IT1 587 aaPredicted RBP23.42■■□□□ 1.34
NKX2-1-202ENST00000498187 CCDC94Q9BW85 323 aaPredicted RBP23.42■■□□□ 1.34
NKX2-1-202ENST00000498187 CCDC192P0DO97 292 aa23.42■■□□□ 1.34
NKX2-1-202ENST00000498187 SMAP1Q8IYB5 467 aaPredicted RBP23.42■■□□□ 1.34
NKX2-1-202ENST00000498187 GOLGA6L6A8MZA4 724 aa23.41■■□□□ 1.34
NKX2-1-202ENST00000498187 RPS6KB1P23443 525 aa23.41■■□□□ 1.34
NKX2-1-202ENST00000498187 EDC3Q96F86 508 aaKnown RBP23.41■■□□□ 1.34
NKX2-1-202ENST00000498187 TATP17735 454 aaPredicted RBP23.41■■□□□ 1.34
NKX2-1-202ENST00000498187 ANKRD1Q15327 319 aa23.41■■□□□ 1.34
NKX2-1-202ENST00000498187 JARID2Q92833 1246 aaPredicted RBP23.41■■□□□ 1.34
NKX2-1-202ENST00000498187 DCCP43146 1447 aa23.4■■□□□ 1.34
NKX2-1-202ENST00000498187 JCADQ9P266 1359 aa23.4■■□□□ 1.34
NKX2-1-202ENST00000498187 ANKRD13DQ6ZTN6 518 aa23.4■■□□□ 1.34
NKX2-1-202ENST00000498187 CDC37L1Q7L3B6 337 aa23.4■■□□□ 1.34
NKX2-1-202ENST00000498187 PIP4K2AP48426 406 aaPredicted RBP23.39■■□□□ 1.34
NKX2-1-202ENST00000498187 COPRSQ9NQ92 184 aa23.39■■□□□ 1.34
NKX2-1-202ENST00000498187 KIF3AQ9Y496 699 aa23.39■■□□□ 1.34
NKX2-1-202ENST00000498187 ALS2Q96Q42 1657 aa23.39■■□□□ 1.34
NKX2-1-202ENST00000498187 TOB2Q14106 344 aaPredicted RBP23.39■■□□□ 1.33
NKX2-1-202ENST00000498187 USP16Q9Y5T5 823 aa23.39■■□□□ 1.33
NKX2-1-202ENST00000498187 MEGF6O75095 1541 aa23.39■■□□□ 1.33
NKX2-1-202ENST00000498187 AFDNP55196 1824 aaKnown RBP23.39■■□□□ 1.33
NKX2-1-202ENST00000498187 LRP10Q7Z4F1 713 aa23.38■■□□□ 1.33
NKX2-1-202ENST00000498187 FERMT3Q86UX7 667 aa23.38■■□□□ 1.33
NKX2-1-202ENST00000498187 C17orf53Q8N3J3 647 aaPredicted RBP23.38■■□□□ 1.33
NKX2-1-202ENST00000498187 KIAA1524Q8TCG1 905 aa23.38■■□□□ 1.33
NKX2-1-202ENST00000498187 HMG20BQ9P0W2 317 aa23.38■■□□□ 1.33
NKX2-1-202ENST00000498187 DBNLQ9UJU6 430 aaKnown RBP23.38■■□□□ 1.33
NKX2-1-202ENST00000498187 TAF5LO75529 589 aa23.38■■□□□ 1.33
NKX2-1-202ENST00000498187 PDCP20941 246 aa23.38■■□□□ 1.33
NKX2-1-202ENST00000498187 RFX5P48382 616 aaPredicted RBP23.38■■□□□ 1.33
NKX2-1-202ENST00000498187 KRT85P78386 507 aa23.38■■□□□ 1.33
NKX2-1-202ENST00000498187 ALDH8A1Q9H2A2 487 aaPredicted RBP23.38■■□□□ 1.33
NKX2-1-202ENST00000498187 TNNI3KQ59H18 835 aa23.37■■□□□ 1.33
NKX2-1-202ENST00000498187 TTC6Q86TZ1 520 aa23.37■■□□□ 1.33
NKX2-1-202ENST00000498187 FPGT-TNNI3KV9GXZ4 949 aa23.37■■□□□ 1.33
NKX2-1-202ENST00000498187 ATP5JP18859 108 aa23.37■■□□□ 1.33
NKX2-1-202ENST00000498187 PTPN12Q05209 780 aaKnown RBP23.37■■□□□ 1.33
NKX2-1-202ENST00000498187 TFCP2Q12800 502 aa23.37■■□□□ 1.33
NKX2-1-202ENST00000498187 IFNL2Q8IZJ0 200 aa23.37■■□□□ 1.33
NKX2-1-202ENST00000498187 SNRPA1P09661 255 aaKnown RBP23.36■■□□□ 1.33
NKX2-1-202ENST00000498187 CHAF1AQ13111 956 aaPredicted RBP23.36■■□□□ 1.33
NKX2-1-202ENST00000498187 TSGA10IPQ3SY00 556 aa23.36■■□□□ 1.33
NKX2-1-202ENST00000498187 FAM173BQ6P4H8 233 aa23.36■■□□□ 1.33
NKX2-1-202ENST00000498187 UBE3BQ7Z3V4 1068 aa23.36■■□□□ 1.33
NKX2-1-202ENST00000498187 TTC5Q8N0Z6 440 aa23.36■■□□□ 1.33
NKX2-1-202ENST00000498187 ARID3AQ99856 593 aa23.36■■□□□ 1.33
NKX2-1-202ENST00000498187 COL15A1P39059 1388 aa23.35■■□□□ 1.33
NKX2-1-202ENST00000498187 AP5Z1O43299 807 aa23.35■■□□□ 1.33
NKX2-1-202ENST00000498187 STK3Q13188 491 aa23.35■■□□□ 1.33
NKX2-1-202ENST00000498187 FAM200AQ8TCP9 573 aa23.35■■□□□ 1.33
NKX2-1-202ENST00000498187 NDUFB9Q9Y6M9 179 aa23.35■■□□□ 1.33
NKX2-1-202ENST00000498187 ELP1O95163 1332 aa23.35■■□□□ 1.33
NKX2-1-202ENST00000498187 USPL1Q5W0Q7 1092 aa23.34■■□□□ 1.33
NKX2-1-202ENST00000498187 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.34■■□□□ 1.33
NKX2-1-202ENST00000498187 MAP3K11Q16584 847 aa23.34■■□□□ 1.33
NKX2-1-202ENST00000498187 ZNF710Q8N1W2 664 aa23.34■■□□□ 1.33
NKX2-1-202ENST00000498187 ARFGEF2Q9Y6D5 1785 aa23.34■■□□□ 1.33
NKX2-1-202ENST00000498187 STRCQ7RTU9 1775 aa23.34■■□□□ 1.33
NKX2-1-202ENST00000498187 RABL6Q3YEC7 729 aaPredicted RBP23.33■■□□□ 1.33
NKX2-1-202ENST00000498187 PLEKHG2Q9H7P9 1386 aa23.33■■□□□ 1.33
NKX2-1-202ENST00000498187 CSB-PGBD3P0DP91 1061 aa23.33■■□□□ 1.33
NKX2-1-202ENST00000498187 NUP62CLQ9H1M0 184 aa23.33■■□□□ 1.33
NKX2-1-202ENST00000498187 KCNF1Q9H3M0 494 aa23.33■■□□□ 1.33
NKX2-1-202ENST00000498187 ATP5J2-PTCD1G3V325 749 aa23.32■■□□□ 1.32
NKX2-1-202ENST00000498187 PTCD1O75127 700 aaKnown RBP23.32■■□□□ 1.32
NKX2-1-202ENST00000498187 KRT32Q14532 448 aa23.32■■□□□ 1.32
NKX2-1-202ENST00000498187 DCAF5Q96JK2 942 aa23.32■■□□□ 1.32
NKX2-1-202ENST00000498187 FMNL2Q96PY5 1086 aa23.32■■□□□ 1.32
NKX2-1-202ENST00000498187 DNAJC2Q99543 621 aaKnown RBP23.32■■□□□ 1.32
NKX2-1-202ENST00000498187 PRDM4Q9UKN5 801 aa23.32■■□□□ 1.32
NKX2-1-202ENST00000498187 DBNDD2Q9BQY9 259 aa23.32■■□□□ 1.32
NKX2-1-202ENST00000498187 CHMP3Q9Y3E7 222 aa23.32■■□□□ 1.32
NKX2-1-202ENST00000498187 ZNF609O15014 1411 aa23.32■■□□□ 1.32
NKX2-1-202ENST00000498187 ABCC6O95255 1503 aa23.31■■□□□ 1.32
NKX2-1-202ENST00000498187 A0A087WZG4 1122 aa23.31■■□□□ 1.32
NKX2-1-202ENST00000498187 CYP27B1O15528 508 aa23.31■■□□□ 1.32
NKX2-1-202ENST00000498187 CHGBP05060 677 aa23.31■■□□□ 1.32
NKX2-1-202ENST00000498187 ATF3P18847 181 aa23.31■■□□□ 1.32
NKX2-1-202ENST00000498187 CCDC129Q6ZRS4 1044 aa23.31■■□□□ 1.32
NKX2-1-202ENST00000498187 SPC24Q8NBT2 197 aa23.31■■□□□ 1.32
NKX2-1-202ENST00000498187 TSC1Q92574 1164 aa23.31■■□□□ 1.32
NKX2-1-202ENST00000498187 PYCARDQ9ULZ3 195 aa23.31■■□□□ 1.32
NKX2-1-202ENST00000498187 COL18A1P39060 1754 aa23.31■■□□□ 1.32
NKX2-1-202ENST00000498187 DDX17Q92841 729 aaKnown RBP23.31■■□□□ 1.32
NKX2-1-202ENST00000498187 SCAND2PQ9GZW5 306 aaPredicted RBP23.31■■□□□ 1.32
NKX2-1-202ENST00000498187 RFX7Q2KHR2 1363 aa23.3■■□□□ 1.32
NKX2-1-202ENST00000498187 LIG1P18858 919 aa23.3■■□□□ 1.32
NKX2-1-202ENST00000498187 NEK1Q96PY6 1258 aa23.3■■□□□ 1.32
NKX2-1-202ENST00000498187 SEC62Q99442 399 aaKnown RBP23.3■■□□□ 1.32
NKX2-1-202ENST00000498187 TYRO3Q06418 890 aa23.29■■□□□ 1.32
NKX2-1-202ENST00000498187 GOLGA6L4A6NEF3 574 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms