RNA–Protein interactions for RNA: ENST00000497316.5

COL1A2-212, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 962 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-212ENST00000497316 FKBP4Q02790 459 aaKnown RBP eCLIP20.43■□□□□ 0.86
COL1A2-212ENST00000497316 GRAPQ13588 217 aa20.43■□□□□ 0.86
COL1A2-212ENST00000497316 TMC4Q7Z404 712 aa20.43■□□□□ 0.86
COL1A2-212ENST00000497316 GRAPLQ8TC17 118 aaPredicted RBP20.43■□□□□ 0.86
COL1A2-212ENST00000497316 ATP6V0A2Q9Y487 856 aa20.43■□□□□ 0.86
COL1A2-212ENST00000497316 ZBED9Q6R2W3 1325 aa20.43■□□□□ 0.86
COL1A2-212ENST00000497316 CCDC88AQ3V6T2 1871 aa20.43■□□□□ 0.86
COL1A2-212ENST00000497316 DICER1Q9UPY3 1922 aaKnown RBP20.41■□□□□ 0.86
COL1A2-212ENST00000497316 OLFM4Q6UX06 510 aa20.41■□□□□ 0.86
COL1A2-212ENST00000497316 SP8Q8IXZ3 490 aa20.41■□□□□ 0.86
COL1A2-212ENST00000497316 PSMD1Q99460 953 aa20.41■□□□□ 0.86
COL1A2-212ENST00000497316 ALDH1L1O75891 902 aa20.4■□□□□ 0.86
COL1A2-212ENST00000497316 CASP7P55210 303 aa20.4■□□□□ 0.86
COL1A2-212ENST00000497316 CCDC152Q4G0S7 254 aa20.4■□□□□ 0.86
COL1A2-212ENST00000497316 CEP350Q5VT06 3117 aa20.4■□□□□ 0.86
COL1A2-212ENST00000497316 UBE3BQ7Z3V4 1068 aa20.4■□□□□ 0.86
COL1A2-212ENST00000497316 JARID2Q92833 1246 aaPredicted RBP20.4■□□□□ 0.86
COL1A2-212ENST00000497316 PLA2G12BQ9BX93 195 aa20.4■□□□□ 0.86
COL1A2-212ENST00000497316 TMX4Q9H1E5 349 aaPredicted RBP20.4■□□□□ 0.86
COL1A2-212ENST00000497316 SMC4Q9NTJ3 1288 aa20.4■□□□□ 0.86
COL1A2-212ENST00000497316 MYH3P11055 1940 aa20.38■□□□□ 0.85
COL1A2-212ENST00000497316 CTSWP56202 376 aa20.38■□□□□ 0.85
COL1A2-212ENST00000497316 CELF1Q92879 486 aaKnown RBP20.38■□□□□ 0.85
COL1A2-212ENST00000497316 BCL2L13Q9BXK5 485 aa20.38■□□□□ 0.85
COL1A2-212ENST00000497316 SRCIN1Q9C0H9 1055 aa20.38■□□□□ 0.85
COL1A2-212ENST00000497316 TAF1P21675 1872 aa20.37■□□□□ 0.85
COL1A2-212ENST00000497316 RTL9Q8NET4 1388 aa20.37■□□□□ 0.85
COL1A2-212ENST00000497316 KDM2BQ8NHM5 1336 aa20.37■□□□□ 0.85
COL1A2-212ENST00000497316 TIAM2Q8IVF5 1701 aa20.37■□□□□ 0.85
COL1A2-212ENST00000497316 KIF3CO14782 793 aa20.37■□□□□ 0.85
COL1A2-212ENST00000497316 RARSP54136 660 aaKnown RBP20.37■□□□□ 0.85
COL1A2-212ENST00000497316 SLC4A10Q6U841 1118 aa20.37■□□□□ 0.85
COL1A2-212ENST00000497316 C16orf71Q8IYS4 520 aaPredicted RBP20.37■□□□□ 0.85
COL1A2-212ENST00000497316 TTLL11Q8NHH1 800 aa20.37■□□□□ 0.85
COL1A2-212ENST00000497316 LRRC37AA6NMS7 1700 aa20.36■□□□□ 0.85
COL1A2-212ENST00000497316 HSPA6P17066 643 aa20.36■□□□□ 0.85
COL1A2-212ENST00000497316 RPS8P62241 208 aaKnown RBP20.36■□□□□ 0.85
COL1A2-212ENST00000497316 VPS33BQ9H267 617 aa20.36■□□□□ 0.85
COL1A2-212ENST00000497316 GRM8O00222 908 aa20.35■□□□□ 0.85
COL1A2-212ENST00000497316 TOMM70O94826 608 aa20.35■□□□□ 0.85
COL1A2-212ENST00000497316 IARSP41252 1262 aaKnown RBP20.35■□□□□ 0.85
COL1A2-212ENST00000497316 RTFDC1Q9BY42 306 aaPredicted RBP20.35■□□□□ 0.85
COL1A2-212ENST00000497316 CSF1RP07333 972 aa20.34■□□□□ 0.85
COL1A2-212ENST00000497316 MPNDQ8N594 471 aa20.34■□□□□ 0.85
COL1A2-212ENST00000497316 SUPT20HQ8NEM7 779 aa20.34■□□□□ 0.85
COL1A2-212ENST00000497316 SEC31BQ9NQW1 1179 aa20.34■□□□□ 0.85
COL1A2-212ENST00000497316 ZNF277Q9NRM2 450 aaPredicted RBP20.34■□□□□ 0.85
COL1A2-212ENST00000497316 KIF16BQ96L93 1317 aa20.33■□□□□ 0.85
COL1A2-212ENST00000497316 GLTPD2A6NH11 291 aa20.33■□□□□ 0.85
COL1A2-212ENST00000497316 ARHGAP45Q92619 1136 aa20.33■□□□□ 0.85
COL1A2-212ENST00000497316 C9orf78Q9NZ63 289 aaPredicted RBP20.33■□□□□ 0.85
COL1A2-212ENST00000497316 COL4A1P02462 1669 aa20.32■□□□□ 0.84
COL1A2-212ENST00000497316 UTYO14607 1347 aa20.32■□□□□ 0.84
COL1A2-212ENST00000497316 DPP8Q6V1X1 898 aaPredicted RBP20.32■□□□□ 0.84
COL1A2-212ENST00000497316 SLC51AQ86UW1 340 aa20.32■□□□□ 0.84
COL1A2-212ENST00000497316 CDC5LQ99459 802 aaKnown RBP20.32■□□□□ 0.84
COL1A2-212ENST00000497316 API5Q9BZZ5 524 aaKnown RBP20.32■□□□□ 0.84
COL1A2-212ENST00000497316 NMRK2Q9NPI5 230 aa20.32■□□□□ 0.84
COL1A2-212ENST00000497316 NOB1Q9ULX3 412 aaKnown RBP20.32■□□□□ 0.84
COL1A2-212ENST00000497316 DPY19L2Q6NUT2 758 aa20.31■□□□□ 0.84
COL1A2-212ENST00000497316 ANKRD18AQ8IVF6 992 aa20.31■□□□□ 0.84
COL1A2-212ENST00000497316 CCDC85AQ96PX6 553 aaPredicted RBP20.31■□□□□ 0.84
COL1A2-212ENST00000497316 GREM2Q9H772 168 aa20.31■□□□□ 0.84
COL1A2-212ENST00000497316 FOXO4P98177 505 aa20.3■□□□□ 0.84
COL1A2-212ENST00000497316 FZD9O00144 591 aa20.29■□□□□ 0.84
COL1A2-212ENST00000497316 CCT4P50991 539 aaKnown RBP20.29■□□□□ 0.84
COL1A2-212ENST00000497316 JDP2Q8WYK2 163 aa20.29■□□□□ 0.84
COL1A2-212ENST00000497316 PODXL2Q9NZ53 605 aa20.29■□□□□ 0.84
COL1A2-212ENST00000497316 LTBP1Q14766 1721 aa20.28■□□□□ 0.84
COL1A2-212ENST00000497316 RBM46Q8TBY0 533 aaKnown RBP20.28■□□□□ 0.84
COL1A2-212ENST00000497316 BSDC1Q9NW68 430 aaPredicted RBP20.28■□□□□ 0.84
COL1A2-212ENST00000497316 NSFL1CQ9UNZ2 370 aaKnown RBP20.28■□□□□ 0.84
COL1A2-212ENST00000497316 DUOX1Q9NRD9 1551 aa20.28■□□□□ 0.84
COL1A2-212ENST00000497316 IPO8O15397 1037 aaKnown RBP20.27■□□□□ 0.84
COL1A2-212ENST00000497316 NBPF7P0C2Y1 421 aaPredicted RBP20.27■□□□□ 0.84
COL1A2-212ENST00000497316 ITGA6P23229 1130 aa20.27■□□□□ 0.84
COL1A2-212ENST00000497316 APLP1P51693 650 aa20.27■□□□□ 0.84
COL1A2-212ENST00000497316 FAM161AQ3B820 660 aa20.27■□□□□ 0.84
COL1A2-212ENST00000497316 LARGE2Q8N3Y3 721 aa20.27■□□□□ 0.84
COL1A2-212ENST00000497316 PPIP5K2O43314 1243 aa20.26■□□□□ 0.83
COL1A2-212ENST00000497316 GPSM2P81274 684 aa20.26■□□□□ 0.83
COL1A2-212ENST00000497316 KIAA2012Q0VF49 1180 aa20.26■□□□□ 0.83
COL1A2-212ENST00000497316 EPHA10Q5JZY3 1008 aa20.26■□□□□ 0.83
COL1A2-212ENST00000497316 USP44Q9H0E7 712 aa20.26■□□□□ 0.83
COL1A2-212ENST00000497316 RRAGCQ9HB90 399 aa20.26■□□□□ 0.83
COL1A2-212ENST00000497316 WDR90Q96KV7 1748 aa20.26■□□□□ 0.83
COL1A2-212ENST00000497316 COL4A5P29400 1685 aa20.26■□□□□ 0.83
COL1A2-212ENST00000497316 ANKRD18BA2A2Z9 1011 aa20.25■□□□□ 0.83
COL1A2-212ENST00000497316 BCAR3O75815 825 aa20.25■□□□□ 0.83
COL1A2-212ENST00000497316 IGHMBP2P38935 993 aaKnown RBP20.25■□□□□ 0.83
COL1A2-212ENST00000497316 LMBR1LQ6UX01 489 aa20.25■□□□□ 0.83
COL1A2-212ENST00000497316 NIM1KQ8IY84 436 aa20.25■□□□□ 0.83
COL1A2-212ENST00000497316 KAZALD1Q96I82 304 aa20.25■□□□□ 0.83
COL1A2-212ENST00000497316 SUCLG2Q96I99 432 aa20.25■□□□□ 0.83
COL1A2-212ENST00000497316 FSTL1Q12841 308 aa20.24■□□□□ 0.83
COL1A2-212ENST00000497316 IFIT5Q13325 482 aaKnown RBP20.24■□□□□ 0.83
COL1A2-212ENST00000497316 AOC3Q16853 763 aa20.24■□□□□ 0.83
COL1A2-212ENST00000497316 EYA3Q99504 573 aa20.24■□□□□ 0.83
COL1A2-212ENST00000497316 POLLQ9UGP5 575 aa20.24■□□□□ 0.83
COL1A2-212ENST00000497316 XDHP47989 1333 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms