RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 TARSP26639 723 aaKnown RBP8.28□□□□□ -1.08
VPS36-206ENST00000497149 FMR1Q06787 632 aaKnown RBP eCLIP8.28□□□□□ -1.08
VPS36-206ENST00000497149 SPEM2Q0P670 501 aa8.28□□□□□ -1.08
VPS36-206ENST00000497149 NLRP13Q86W25 1043 aa8.28□□□□□ -1.08
VPS36-206ENST00000497149 GPR161Q8N6U8 529 aaKnown RBP8.28□□□□□ -1.08
VPS36-206ENST00000497149 SLC30A3Q99726 388 aa8.28□□□□□ -1.08
VPS36-206ENST00000497149 TNFRSF21O75509 655 aa8.27□□□□□ -1.09
VPS36-206ENST00000497149 NEFLP07196 543 aa8.27□□□□□ -1.09
VPS36-206ENST00000497149 P4HBP07237 508 aaKnown RBP8.27□□□□□ -1.09
VPS36-206ENST00000497149 EFCC1Q9HA90 598 aa8.27□□□□□ -1.09
VPS36-206ENST00000497149 TMEM63CQ9P1W3 806 aa8.27□□□□□ -1.09
VPS36-206ENST00000497149 EAPPQ56P03 285 aaPredicted RBP8.26□□□□□ -1.09
VPS36-206ENST00000497149 KRT25Q7Z3Z0 450 aa8.26□□□□□ -1.09
VPS36-206ENST00000497149 FBXO33Q7Z6M2 555 aa8.26□□□□□ -1.09
VPS36-206ENST00000497149 PNMA5Q96PV4 448 aa8.26□□□□□ -1.09
VPS36-206ENST00000497149 BCL2L13Q9BXK5 485 aa8.26□□□□□ -1.09
VPS36-206ENST00000497149 ABI2Q9NYB9 513 aaPredicted RBP8.26□□□□□ -1.09
VPS36-206ENST00000497149 ZFATQ9P243 1243 aa8.26□□□□□ -1.09
VPS36-206ENST00000497149 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.26□□□□□ -1.09
VPS36-206ENST00000497149 C2CD2LO14523 706 aa8.25□□□□□ -1.09
VPS36-206ENST00000497149 MAPK8P45983 427 aa8.25□□□□□ -1.09
VPS36-206ENST00000497149 ORC1Q13415 861 aa8.25□□□□□ -1.09
VPS36-206ENST00000497149 GAS6Q14393 721 aa8.25□□□□□ -1.09
VPS36-206ENST00000497149 TTC39BQ5VTQ0 682 aaPredicted RBP8.25□□□□□ -1.09
VPS36-206ENST00000497149 CNTN3Q9P232 1028 aa8.25□□□□□ -1.09
VPS36-206ENST00000497149 FOXD3Q9UJU5 478 aaPredicted RBP8.25□□□□□ -1.09
VPS36-206ENST00000497149 RBM47A0AV96 593 aaKnown RBP8.24□□□□□ -1.09
VPS36-206ENST00000497149 RARAP10276 462 aa8.24□□□□□ -1.09
VPS36-206ENST00000497149 NFKB1P19838 968 aa8.24□□□□□ -1.09
VPS36-206ENST00000497149 MX2P20592 715 aa8.24□□□□□ -1.09
VPS36-206ENST00000497149 RAB44Q7Z6P3 723 aaPredicted RBP8.24□□□□□ -1.09
VPS36-206ENST00000497149 SNX29Q8TEQ0 813 aa8.24□□□□□ -1.09
VPS36-206ENST00000497149 BHMTQ93088 406 aa8.24□□□□□ -1.09
VPS36-206ENST00000497149 CSRNP1Q96S65 589 aa8.24□□□□□ -1.09
VPS36-206ENST00000497149 ZFYVE28Q9HCC9 887 aa8.24□□□□□ -1.09
VPS36-206ENST00000497149 PRR12Q9ULL5 1215 aa8.24□□□□□ -1.09
VPS36-206ENST00000497149 EIF1AYO14602 144 aaKnown RBP8.23□□□□□ -1.09
VPS36-206ENST00000497149 MMP20O60882 483 aa8.23□□□□□ -1.09
VPS36-206ENST00000497149 PHACTR2O75167 634 aa8.23□□□□□ -1.09
VPS36-206ENST00000497149 MAP3K6O95382 1288 aa8.23□□□□□ -1.09
VPS36-206ENST00000497149 BMP4P12644 408 aa8.23□□□□□ -1.09
VPS36-206ENST00000497149 NEUROD1Q13562 356 aa8.23□□□□□ -1.09
VPS36-206ENST00000497149 ENOX2Q16206 610 aaKnown RBP8.23□□□□□ -1.09
VPS36-206ENST00000497149 C1orf127Q8N9H9 656 aa8.23□□□□□ -1.09
VPS36-206ENST00000497149 DNAJC25Q9H1X3 360 aa8.23□□□□□ -1.09
VPS36-206ENST00000497149 CPNE3O75131 537 aaKnown RBP8.22□□□□□ -1.09
VPS36-206ENST00000497149 TAGLNQ01995 201 aaKnown RBP8.22□□□□□ -1.09
VPS36-206ENST00000497149 GIPC2Q8TF65 315 aa8.22□□□□□ -1.09
VPS36-206ENST00000497149 PMEPA1Q969W9 287 aa8.22□□□□□ -1.09
VPS36-206ENST00000497149 COL25A1Q9BXS0 654 aaPredicted RBP8.22□□□□□ -1.09
VPS36-206ENST00000497149 CHRDQ9H2X0 955 aa8.22□□□□□ -1.09
VPS36-206ENST00000497149 MBIPQ9NS73 344 aa8.22□□□□□ -1.09
VPS36-206ENST00000497149 TLR7Q9NYK1 1049 aaKnown RBP8.22□□□□□ -1.09
VPS36-206ENST00000497149 PNMA6FA0A0J9YX94 578 aa8.21□□□□□ -1.1
VPS36-206ENST00000497149 LDHBP07195 334 aaKnown RBP8.21□□□□□ -1.1
VPS36-206ENST00000497149 ZNF16P17020 682 aaPredicted RBP8.21□□□□□ -1.1
VPS36-206ENST00000497149 ZNF326Q5BKZ1 582 aaKnown RBP8.21□□□□□ -1.1
VPS36-206ENST00000497149 ZNF468Q5VIY5 522 aaPredicted RBP8.21□□□□□ -1.1
VPS36-206ENST00000497149 SYT9Q86SS6 491 aa8.21□□□□□ -1.1
VPS36-206ENST00000497149 OR13H1Q8NG92 308 aa8.21□□□□□ -1.1
VPS36-206ENST00000497149 WWC3Q9ULE0 1092 aa8.21□□□□□ -1.1
VPS36-206ENST00000497149 NSFL1CQ9UNZ2 370 aaKnown RBP8.21□□□□□ -1.1
VPS36-206ENST00000497149 CYP2E1P05181 493 aaPredicted RBP8.2□□□□□ -1.1
VPS36-206ENST00000497149 CES1P23141 567 aa8.2□□□□□ -1.1
VPS36-206ENST00000497149 RNFT1Q5M7Z0 435 aa8.2□□□□□ -1.1
VPS36-206ENST00000497149 USPL1Q5W0Q7 1092 aa8.2□□□□□ -1.1
VPS36-206ENST00000497149 ZNF428Q96B54 188 aa8.2□□□□□ -1.1
VPS36-206ENST00000497149 AVENQ9NQS1 362 aaPredicted RBP8.2□□□□□ -1.1
VPS36-206ENST00000497149 EREGO14944 169 aa8.19□□□□□ -1.1
VPS36-206ENST00000497149 SIN3BO75182 1162 aa8.19□□□□□ -1.1
VPS36-206ENST00000497149 PSAPP07602 524 aa8.19□□□□□ -1.1
VPS36-206ENST00000497149 SOX18P35713 384 aa8.19□□□□□ -1.1
VPS36-206ENST00000497149 MAP2K3P46734 347 aa8.19□□□□□ -1.1
VPS36-206ENST00000497149 PCBP4P57723 403 aaKnown RBP8.19□□□□□ -1.1
VPS36-206ENST00000497149 FGD1P98174 961 aa8.19□□□□□ -1.1
VPS36-206ENST00000497149 ATP2B2Q01814 1243 aa8.19□□□□□ -1.1
VPS36-206ENST00000497149 ALG1LQ6GMV1 187 aa8.19□□□□□ -1.1
VPS36-206ENST00000497149 DHX32Q7L7V1 743 aaKnown RBP8.19□□□□□ -1.1
VPS36-206ENST00000497149 SETDB2Q96T68 719 aa8.19□□□□□ -1.1
VPS36-206ENST00000497149 KLF15Q9UIH9 416 aa8.19□□□□□ -1.1
VPS36-206ENST00000497149 PRPF40AO75400 957 aaKnown RBP8.18□□□□□ -1.1
VPS36-206ENST00000497149 ARAFP10398 606 aa8.18□□□□□ -1.1
VPS36-206ENST00000497149 PLAURQ03405 335 aa8.18□□□□□ -1.1
VPS36-206ENST00000497149 CCDC74AQ96AQ1 378 aa8.18□□□□□ -1.1
VPS36-206ENST00000497149 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.18□□□□□ -1.1
VPS36-206ENST00000497149 IGF1RP08069 1367 aa8.18□□□□□ -1.1
VPS36-206ENST00000497149 PHF20L1A8MW92 1017 aa8.17□□□□□ -1.1
VPS36-206ENST00000497149 POLR3DP05423 398 aaPredicted RBP8.17□□□□□ -1.1
VPS36-206ENST00000497149 HOXD8P13378 290 aaPredicted RBP8.17□□□□□ -1.1
VPS36-206ENST00000497149 RBM25P49756 843 aaKnown RBP8.17□□□□□ -1.1
VPS36-206ENST00000497149 KRT76Q01546 638 aa8.17□□□□□ -1.1
VPS36-206ENST00000497149 GALNT12Q8IXK2 581 aa8.17□□□□□ -1.1
VPS36-206ENST00000497149 TRPM4Q8TD43 1214 aa8.17□□□□□ -1.1
VPS36-206ENST00000497149 FBF1Q8TES7 1133 aa8.17□□□□□ -1.1
VPS36-206ENST00000497149 IGFLR1Q9H665 355 aa8.17□□□□□ -1.1
VPS36-206ENST00000497149 SALL4Q9UJQ4 1053 aa8.17□□□□□ -1.1
VPS36-206ENST00000497149 ZBTB42B2RXF5 422 aa8.16□□□□□ -1.1
VPS36-206ENST00000497149 ADH6P28332 368 aa8.16□□□□□ -1.1
VPS36-206ENST00000497149 NRLP54845 237 aa8.16□□□□□ -1.1
VPS36-206ENST00000497149 SRSF11Q05519 484 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms