RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 RAD17O75943 681 aa13.07□□□□□ -0.32
SRSF4-205ENST00000497015 EGFRP00533 1210 aa13.07□□□□□ -0.32
SRSF4-205ENST00000497015 GRIPAP1Q4V328 841 aa13.07□□□□□ -0.32
SRSF4-205ENST00000497015 RGMBQ6NW40 437 aa13.07□□□□□ -0.32
SRSF4-205ENST00000497015 GAS2L2Q8NHY3 880 aa13.07□□□□□ -0.32
SRSF4-205ENST00000497015 RTFDC1Q9BY42 306 aaPredicted RBP13.07□□□□□ -0.32
SRSF4-205ENST00000497015 SAGE1Q9NXZ1 904 aa13.07□□□□□ -0.32
SRSF4-205ENST00000497015 CNOT7Q9UIV1 285 aaKnown RBP13.07□□□□□ -0.32
SRSF4-205ENST00000497015 HPS5Q9UPZ3 1129 aa13.07□□□□□ -0.32
SRSF4-205ENST00000497015 ZBTB12Q9Y330 459 aaPredicted RBP13.07□□□□□ -0.32
SRSF4-205ENST00000497015 TTLL7Q6ZT98 887 aa13.06□□□□□ -0.32
SRSF4-205ENST00000497015 RPGRQ92834 1020 aaKnown RBP13.06□□□□□ -0.32
SRSF4-205ENST00000497015 ATP6V0A2Q9Y487 856 aa13.06□□□□□ -0.32
SRSF4-205ENST00000497015 RIC1Q4ADV7 1423 aa13.05□□□□□ -0.32
SRSF4-205ENST00000497015 CC2D1BQ5T0F9 858 aaKnown RBP13.05□□□□□ -0.32
SRSF4-205ENST00000497015 SAMD7Q7Z3H4 446 aa13.05□□□□□ -0.32
SRSF4-205ENST00000497015 CTU1Q7Z7A3 348 aaKnown RBP13.05□□□□□ -0.32
SRSF4-205ENST00000497015 NGEFQ8N5V2 710 aa13.05□□□□□ -0.32
SRSF4-205ENST00000497015 RBM17Q96I25 401 aaKnown RBP13.05□□□□□ -0.32
SRSF4-205ENST00000497015 VPS33BQ9H267 617 aa13.05□□□□□ -0.32
SRSF4-205ENST00000497015 COL3A1P02461 1466 aaPredicted RBP13.04□□□□□ -0.32
SRSF4-205ENST00000497015 ERVV-1B6SEH8 477 aa13.04□□□□□ -0.32
SRSF4-205ENST00000497015 NTSR2O95665 410 aa13.04□□□□□ -0.32
SRSF4-205ENST00000497015 GPTP24298 496 aa13.04□□□□□ -0.32
SRSF4-205ENST00000497015 DCTN1Q14203 1278 aa13.04□□□□□ -0.32
SRSF4-205ENST00000497015 MCM10Q7L590 875 aa13.04□□□□□ -0.32
SRSF4-205ENST00000497015 ZNF34Q8IZ26 560 aa13.04□□□□□ -0.32
SRSF4-205ENST00000497015 NYXQ9GZU5 481 aa13.04□□□□□ -0.32
SRSF4-205ENST00000497015 MIS18AQ9NYP9 233 aa13.04□□□□□ -0.32
SRSF4-205ENST00000497015 U2SURPO15042 1029 aaKnown RBP13.03□□□□□ -0.32
SRSF4-205ENST00000497015 ZNF157P51786 506 aaPredicted RBP13.03□□□□□ -0.32
SRSF4-205ENST00000497015 KIAA2012Q0VF49 1180 aa13.03□□□□□ -0.32
SRSF4-205ENST00000497015 HABP4Q5JVS0 413 aaKnown RBP13.03□□□□□ -0.32
SRSF4-205ENST00000497015 PLCD3Q8N3E9 789 aa13.03□□□□□ -0.32
SRSF4-205ENST00000497015 CCDC102AQ96A19 550 aa13.03□□□□□ -0.32
SRSF4-205ENST00000497015 GBA2Q9HCG7 927 aaPredicted RBP13.03□□□□□ -0.32
SRSF4-205ENST00000497015 ADM5C9JUS6 153 aa13.02□□□□□ -0.33
SRSF4-205ENST00000497015 MICALL2Q8IY33 904 aa13.02□□□□□ -0.33
SRSF4-205ENST00000497015 BCL2L13Q9BXK5 485 aa13.02□□□□□ -0.33
SRSF4-205ENST00000497015 RSPH6AQ9H0K4 717 aa13.02□□□□□ -0.33
SRSF4-205ENST00000497015 KCNQ5Q9NR82 932 aa13.02□□□□□ -0.33
SRSF4-205ENST00000497015 MAP3K15Q6ZN16 1313 aa13.02□□□□□ -0.33
SRSF4-205ENST00000497015 MKI67P46013 3256 aaKnown RBP13.01□□□□□ -0.33
SRSF4-205ENST00000497015 SLC10A3P09131 477 aa13.01□□□□□ -0.33
SRSF4-205ENST00000497015 POLA2Q14181 598 aa13.01□□□□□ -0.33
SRSF4-205ENST00000497015 SLC10A5Q5PT55 438 aa13.01□□□□□ -0.33
SRSF4-205ENST00000497015 KRT26Q7Z3Y9 468 aa13.01□□□□□ -0.33
SRSF4-205ENST00000497015 C2orf69Q8N8R5 385 aa13.01□□□□□ -0.33
SRSF4-205ENST00000497015 CDHR2Q9BYE9 1310 aa13.01□□□□□ -0.33
SRSF4-205ENST00000497015 ABCC4O15439 1325 aa13□□□□□ -0.33
SRSF4-205ENST00000497015 ASTN2O75129 1339 aaPredicted RBP13□□□□□ -0.33
SRSF4-205ENST00000497015 PRKAR2BP31323 418 aa13□□□□□ -0.33
SRSF4-205ENST00000497015 TNIP1Q15025 636 aa13□□□□□ -0.33
SRSF4-205ENST00000497015 TMEM132AQ24JP5 1023 aa13□□□□□ -0.33
SRSF4-205ENST00000497015 TBC1D10BQ4KMP7 808 aaPredicted RBP13□□□□□ -0.33
SRSF4-205ENST00000497015 SP8Q8IXZ3 490 aa13□□□□□ -0.33
SRSF4-205ENST00000497015 MPNDQ8N594 471 aa13□□□□□ -0.33
SRSF4-205ENST00000497015 DPF2Q92785 391 aa13□□□□□ -0.33
SRSF4-205ENST00000497015 ZBTB3Q9H5J0 574 aa13□□□□□ -0.33
SRSF4-205ENST00000497015 H7C1D1 291 aa12.99□□□□□ -0.33
SRSF4-205ENST00000497015 PSMD14O00487 310 aa12.99□□□□□ -0.33
SRSF4-205ENST00000497015 RALBP1Q15311 655 aa12.99□□□□□ -0.33
SRSF4-205ENST00000497015 RBM26Q5T8P6 1007 aaKnown RBP12.99□□□□□ -0.33
SRSF4-205ENST00000497015 DPP8Q6V1X1 898 aaPredicted RBP12.99□□□□□ -0.33
SRSF4-205ENST00000497015 ZNF296Q8WUU4 475 aaPredicted RBP12.99□□□□□ -0.33
SRSF4-205ENST00000497015 CFAP53Q96M91 514 aa12.99□□□□□ -0.33
SRSF4-205ENST00000497015 RRP7AQ9Y3A4 280 aaKnown RBP12.99□□□□□ -0.33
SRSF4-205ENST00000497015 IBTKQ9P2D0 1353 aaPredicted RBP12.98□□□□□ -0.33
SRSF4-205ENST00000497015 NUP98P52948 1817 aa12.98□□□□□ -0.33
SRSF4-205ENST00000497015 TBC1D8O95759 1140 aa12.98□□□□□ -0.33
SRSF4-205ENST00000497015 DDX10Q13206 875 aaKnown RBP12.98□□□□□ -0.33
SRSF4-205ENST00000497015 HS6ST3Q8IZP7 471 aa12.98□□□□□ -0.33
SRSF4-205ENST00000497015 SUPT20HQ8NEM7 779 aa12.98□□□□□ -0.33
SRSF4-205ENST00000497015 NLRP3Q96P20 1036 aa12.98□□□□□ -0.33
SRSF4-205ENST00000497015 POLR2AP24928 1970 aaKnown RBP12.98□□□□□ -0.33
SRSF4-205ENST00000497015 ZNF316A6NFI3 1004 aaPredicted RBP12.97□□□□□ -0.33
SRSF4-205ENST00000497015 BBOX1O75936 387 aa12.97□□□□□ -0.33
SRSF4-205ENST00000497015 PPP2R1AP30153 589 aa12.97□□□□□ -0.33
SRSF4-205ENST00000497015 TAF7Q15545 349 aaPredicted RBP12.97□□□□□ -0.33
SRSF4-205ENST00000497015 GIGYF2Q6Y7W6 1299 aaKnown RBP12.97□□□□□ -0.33
SRSF4-205ENST00000497015 LRP10Q7Z4F1 713 aa12.97□□□□□ -0.33
SRSF4-205ENST00000497015 RASAL3Q86YV0 1011 aa12.97□□□□□ -0.33
SRSF4-205ENST00000497015 R3HDMLQ9H3Y0 253 aa12.97□□□□□ -0.33
SRSF4-205ENST00000497015 MYL6BP14649 208 aa12.96□□□□□ -0.33
SRSF4-205ENST00000497015 FXR1P51114 621 aaKnown RBP eCLIP12.96□□□□□ -0.33
SRSF4-205ENST00000497015 PKN2Q16513 984 aaKnown RBP12.96□□□□□ -0.33
SRSF4-205ENST00000497015 MOB2Q70IA6 237 aa12.96□□□□□ -0.33
SRSF4-205ENST00000497015 DUOX1Q9NRD9 1551 aa12.95□□□□□ -0.34
SRSF4-205ENST00000497015 HCLS1P14317 486 aaPredicted RBP12.95□□□□□ -0.34
SRSF4-205ENST00000497015 EIF4A1P60842 406 aaKnown RBP12.95□□□□□ -0.34
SRSF4-205ENST00000497015 HOMEZQ8IX15 550 aa12.95□□□□□ -0.34
SRSF4-205ENST00000497015 DCPSQ96C86 337 aaKnown RBP12.95□□□□□ -0.34
SRSF4-205ENST00000497015 GCC1Q96CN9 775 aa12.95□□□□□ -0.34
SRSF4-205ENST00000497015 DBNDD1Q9H9R9 158 aa12.95□□□□□ -0.34
SRSF4-205ENST00000497015 RTL9Q8NET4 1388 aa12.94□□□□□ -0.34
SRSF4-205ENST00000497015 POTEFA5A3E0 1075 aa12.94□□□□□ -0.34
SRSF4-205ENST00000497015 CNGB1Q14028 1251 aaPredicted RBP12.94□□□□□ -0.34
SRSF4-205ENST00000497015 PDIA6Q15084 440 aa12.94□□□□□ -0.34
SRSF4-205ENST00000497015 CDCA5Q96FF9 252 aa12.94□□□□□ -0.34
SRSF4-205ENST00000497015 THUMPD2Q9BTF0 503 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms