RNA–Protein interactions for RNA: ENST00000496659.1

C4A-258, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-258ENST00000496659 ERFEQ4G0M1 354 aa12.4□□□□□ -0.42
C4A-258ENST00000496659 CCDC152Q4G0S7 254 aa12.4□□□□□ -0.42
C4A-258ENST00000496659 HSP90AB4PQ58FF6 505 aa12.4□□□□□ -0.42
C4A-258ENST00000496659 NUTM1Q86Y26 1132 aa12.4□□□□□ -0.42
C4A-258ENST00000496659 JARID2Q92833 1246 aaPredicted RBP12.4□□□□□ -0.42
C4A-258ENST00000496659 NLRP3Q96P20 1036 aa12.4□□□□□ -0.42
C4A-258ENST00000496659 ZBTB47Q9UFB7 747 aaPredicted RBP12.4□□□□□ -0.42
C4A-258ENST00000496659 WWC3Q9ULE0 1092 aa12.4□□□□□ -0.42
C4A-258ENST00000496659 NRXN2Q9P2S2 1712 aa12.4□□□□□ -0.43
C4A-258ENST00000496659 FOXO4P98177 505 aa12.39□□□□□ -0.43
C4A-258ENST00000496659 DDR1Q08345 913 aa12.39□□□□□ -0.43
C4A-258ENST00000496659 CCDC57Q2TAC2 916 aa12.39□□□□□ -0.43
C4A-258ENST00000496659 TAF7LQ5H9L4 462 aa12.39□□□□□ -0.43
C4A-258ENST00000496659 SLC10A5Q5PT55 438 aa12.39□□□□□ -0.43
C4A-258ENST00000496659 B4GALNT3Q6L9W6 998 aa12.39□□□□□ -0.43
C4A-258ENST00000496659 PRR5LQ6MZQ0 368 aa12.39□□□□□ -0.43
C4A-258ENST00000496659 LMBR1LQ6UX01 489 aa12.39□□□□□ -0.43
C4A-258ENST00000496659 SSH3Q8TE77 659 aa12.39□□□□□ -0.43
C4A-258ENST00000496659 GCC1Q96CN9 775 aa12.39□□□□□ -0.43
C4A-258ENST00000496659 CD2APQ9Y5K6 639 aa12.39□□□□□ -0.43
C4A-258ENST00000496659 RTL9Q8NET4 1388 aa12.39□□□□□ -0.43
C4A-258ENST00000496659 ABCC12Q96J65 1359 aa12.39□□□□□ -0.43
C4A-258ENST00000496659 DDX60Q8IY21 1712 aaKnown RBP12.39□□□□□ -0.43
C4A-258ENST00000496659 MYH3P11055 1940 aa12.39□□□□□ -0.43
C4A-258ENST00000496659 ANKRD18BA2A2Z9 1011 aa12.38□□□□□ -0.43
C4A-258ENST00000496659 IFIT5Q13325 482 aaKnown RBP12.38□□□□□ -0.43
C4A-258ENST00000496659 KAZALD1Q96I82 304 aa12.38□□□□□ -0.43
C4A-258ENST00000496659 PDZRN3Q9UPQ7 1066 aa12.38□□□□□ -0.43
C4A-258ENST00000496659 PNMA6EA0A0J9YXQ4 647 aa12.37□□□□□ -0.43
C4A-258ENST00000496659 CSF1RP07333 972 aa12.37□□□□□ -0.43
C4A-258ENST00000496659 HCLS1P14317 486 aaPredicted RBP12.37□□□□□ -0.43
C4A-258ENST00000496659 PDE6BP35913 854 aa12.37□□□□□ -0.43
C4A-258ENST00000496659 POLA2Q14181 598 aa12.37□□□□□ -0.43
C4A-258ENST00000496659 SF3B3Q15393 1217 aaKnown RBP12.37□□□□□ -0.43
C4A-258ENST00000496659 EPHA10Q5JZY3 1008 aa12.37□□□□□ -0.43
C4A-258ENST00000496659 ERC1Q8IUD2 1116 aa12.37□□□□□ -0.43
C4A-258ENST00000496659 TTLL11Q8NHH1 800 aa12.37□□□□□ -0.43
C4A-258ENST00000496659 CDC5LQ99459 802 aaKnown RBP12.37□□□□□ -0.43
C4A-258ENST00000496659 GOLGB1Q14789 3259 aaKnown RBP12.37□□□□□ -0.43
C4A-258ENST00000496659 RAB11FIP3O75154 756 aa12.36□□□□□ -0.43
C4A-258ENST00000496659 OS9Q13438 667 aaPredicted RBP12.36□□□□□ -0.43
C4A-258ENST00000496659 FAM161AQ3B820 660 aa12.36□□□□□ -0.43
C4A-258ENST00000496659 SIRT2Q8IXJ6 389 aa12.36□□□□□ -0.43
C4A-258ENST00000496659 RPGRQ92834 1020 aaKnown RBP12.36□□□□□ -0.43
C4A-258ENST00000496659 BRIP1Q9BX63 1249 aa12.36□□□□□ -0.43
C4A-258ENST00000496659 FBXO3Q9UK99 471 aa12.36□□□□□ -0.43
C4A-258ENST00000496659 TNRC6CQ9HCJ0 1690 aaKnown RBP12.35□□□□□ -0.43
C4A-258ENST00000496659 ITGA6P23229 1130 aa12.35□□□□□ -0.43
C4A-258ENST00000496659 IGHMBP2P38935 993 aaKnown RBP12.35□□□□□ -0.43
C4A-258ENST00000496659 G3BP1Q13283 466 aaKnown RBP eCLIP12.35□□□□□ -0.43
C4A-258ENST00000496659 DDX46Q7L014 1031 aaKnown RBP12.35□□□□□ -0.43
C4A-258ENST00000496659 SYNE4Q8N205 404 aa12.35□□□□□ -0.43
C4A-258ENST00000496659 DCTPP1Q9H773 170 aa12.35□□□□□ -0.43
C4A-258ENST00000496659 COPRSQ9NQ92 184 aa12.35□□□□□ -0.43
C4A-258ENST00000496659 KDM2BQ8NHM5 1336 aa12.35□□□□□ -0.43
C4A-258ENST00000496659 GRIN3BO60391 1043 aa12.34□□□□□ -0.43
C4A-258ENST00000496659 SURF6O75683 361 aaKnown RBP12.34□□□□□ -0.43
C4A-258ENST00000496659 IGHDP01880 384 aa12.34□□□□□ -0.43
C4A-258ENST00000496659 SMC5Q8IY18 1101 aa12.34□□□□□ -0.43
C4A-258ENST00000496659 CCDC85AQ96PX6 553 aaPredicted RBP12.34□□□□□ -0.43
C4A-258ENST00000496659 GREM2Q9H772 168 aa12.34□□□□□ -0.43
C4A-258ENST00000496659 C10orf71Q711Q0 1435 aa12.34□□□□□ -0.43
C4A-258ENST00000496659 CIAO1O76071 339 aa12.33□□□□□ -0.44
C4A-258ENST00000496659 RFX5P48382 616 aaPredicted RBP12.33□□□□□ -0.44
C4A-258ENST00000496659 CRY2Q49AN0 593 aa12.33□□□□□ -0.44
C4A-258ENST00000496659 ANKRD18AQ8IVF6 992 aa12.33□□□□□ -0.44
C4A-258ENST00000496659 RBM17Q96I25 401 aaKnown RBP12.33□□□□□ -0.44
C4A-258ENST00000496659 MPHOSPH8Q99549 860 aa12.33□□□□□ -0.44
C4A-258ENST00000496659 EXOC6BQ9Y2D4 811 aa12.33□□□□□ -0.44
C4A-258ENST00000496659 NOP58Q9Y2X3 529 aaKnown RBP12.33□□□□□ -0.44
C4A-258ENST00000496659 IL15P40933 162 aaPredicted RBP12.32□□□□□ -0.44
C4A-258ENST00000496659 PTPN12Q05209 780 aaKnown RBP12.32□□□□□ -0.44
C4A-258ENST00000496659 CCDC24Q8N4L8 307 aa12.32□□□□□ -0.44
C4A-258ENST00000496659 KIF1BPQ96EK5 621 aa12.32□□□□□ -0.44
C4A-258ENST00000496659 LRRCC1Q9C099 1032 aa12.32□□□□□ -0.44
C4A-258ENST00000496659 CNNM1Q9NRU3 951 aa12.32□□□□□ -0.44
C4A-258ENST00000496659 A0A0G2JLW4 131 aa12.31□□□□□ -0.44
C4A-258ENST00000496659 KLRG2A4D1S0 409 aaPredicted RBP12.31□□□□□ -0.44
C4A-258ENST00000496659 H0YIN7 160 aa12.31□□□□□ -0.44
C4A-258ENST00000496659 EYA2O00167 538 aa12.31□□□□□ -0.44
C4A-258ENST00000496659 NPR1P16066 1061 aa12.31□□□□□ -0.44
C4A-258ENST00000496659 GRAPQ13588 217 aa12.31□□□□□ -0.44
C4A-258ENST00000496659 LDHAL6AQ6ZMR3 332 aa12.31□□□□□ -0.44
C4A-258ENST00000496659 TMC4Q7Z404 712 aa12.31□□□□□ -0.44
C4A-258ENST00000496659 GRAPLQ8TC17 118 aaPredicted RBP12.31□□□□□ -0.44
C4A-258ENST00000496659 SIL1Q9H173 461 aa12.31□□□□□ -0.44
C4A-258ENST00000496659 PA2G4Q9UQ80 394 aaKnown RBP12.31□□□□□ -0.44
C4A-258ENST00000496659 ANKRD31Q8N7Z5 1873 aa12.3□□□□□ -0.44
C4A-258ENST00000496659 ALDH1B1P30837 517 aa12.3□□□□□ -0.44
C4A-258ENST00000496659 HOXA10P31260 410 aaPredicted RBP12.3□□□□□ -0.44
C4A-258ENST00000496659 ANKRD45Q5TZF3 282 aa12.3□□□□□ -0.44
C4A-258ENST00000496659 C3orf67Q6ZVT6 689 aa12.3□□□□□ -0.44
C4A-258ENST00000496659 C2CD5Q86YS7 1000 aa12.3□□□□□ -0.44
C4A-258ENST00000496659 CLASRPQ8N2M8 674 aaKnown RBP12.3□□□□□ -0.44
C4A-258ENST00000496659 MASTLQ96GX5 879 aa12.3□□□□□ -0.44
C4A-258ENST00000496659 CRAMP1Q96RY5 1269 aa12.3□□□□□ -0.44
C4A-258ENST00000496659 TMX4Q9H1E5 349 aaPredicted RBP12.3□□□□□ -0.44
C4A-258ENST00000496659 MROH5Q6ZUA9 1318 aa12.3□□□□□ -0.44
C4A-258ENST00000496659 KIAA1551Q9HCM1 1747 aa12.29□□□□□ -0.44
C4A-258ENST00000496659 APBB1O00213 710 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms