RNA–Protein interactions for RNA: ENST00000496327.1

CNOT3-207, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-207ENST00000496327 FRAT1Q92837 279 aaPredicted RBP21.1■□□□□ 0.97
CNOT3-207ENST00000496327 ARFGEF1Q9Y6D6 1849 aa21.1■□□□□ 0.97
CNOT3-207ENST00000496327 NFKBIEO00221 500 aa21.09■□□□□ 0.97
CNOT3-207ENST00000496327 RASSF7Q02833 373 aa21.09■□□□□ 0.97
CNOT3-207ENST00000496327 DDX60Q8IY21 1712 aaKnown RBP21.09■□□□□ 0.97
CNOT3-207ENST00000496327 YY1P25490 414 aa21.08■□□□□ 0.97
CNOT3-207ENST00000496327 ATF7IPQ6VMQ6 1270 aa21.08■□□□□ 0.97
CNOT3-207ENST00000496327 TTLL11Q8NHH1 800 aa21.08■□□□□ 0.97
CNOT3-207ENST00000496327 CCDC85AQ96PX6 553 aaPredicted RBP21.08■□□□□ 0.97
CNOT3-207ENST00000496327 TMX4Q9H1E5 349 aaPredicted RBP21.08■□□□□ 0.97
CNOT3-207ENST00000496327 SLX4Q8IY92 1834 aa21.08■□□□□ 0.96
CNOT3-207ENST00000496327 LAMB2P55268 1798 aa21.08■□□□□ 0.96
CNOT3-207ENST00000496327 TRIM27P14373 513 aa21.07■□□□□ 0.96
CNOT3-207ENST00000496327 ZKSCAN2Q63HK3 967 aa21.07■□□□□ 0.96
CNOT3-207ENST00000496327 OLFM4Q6UX06 510 aa21.07■□□□□ 0.96
CNOT3-207ENST00000496327 TMC4Q7Z404 712 aa21.07■□□□□ 0.96
CNOT3-207ENST00000496327 RTKN2Q8IZC4 609 aa21.07■□□□□ 0.96
CNOT3-207ENST00000496327 CELF1Q92879 486 aaKnown RBP21.07■□□□□ 0.96
CNOT3-207ENST00000496327 TAOK3Q9H2K8 898 aa21.07■□□□□ 0.96
CNOT3-207ENST00000496327 ATP6V0A2Q9Y487 856 aa21.07■□□□□ 0.96
CNOT3-207ENST00000496327 UTYO14607 1347 aa21.06■□□□□ 0.96
CNOT3-207ENST00000496327 LTBP3Q9NS15 1303 aa21.06■□□□□ 0.96
CNOT3-207ENST00000496327 GRIPAP1Q4V328 841 aa21.06■□□□□ 0.96
CNOT3-207ENST00000496327 SEC31BQ9NQW1 1179 aa21.06■□□□□ 0.96
CNOT3-207ENST00000496327 RTL9Q8NET4 1388 aa21.06■□□□□ 0.96
CNOT3-207ENST00000496327 SP8Q8IXZ3 490 aa21.05■□□□□ 0.96
CNOT3-207ENST00000496327 GREM2Q9H772 168 aa21.05■□□□□ 0.96
CNOT3-207ENST00000496327 CSF1RP07333 972 aa21.04■□□□□ 0.96
CNOT3-207ENST00000496327 NBPF7P0C2Y1 421 aaPredicted RBP21.04■□□□□ 0.96
CNOT3-207ENST00000496327 LMNB1P20700 586 aa21.04■□□□□ 0.96
CNOT3-207ENST00000496327 RPS8P62241 208 aaKnown RBP21.04■□□□□ 0.96
CNOT3-207ENST00000496327 FKBP4Q02790 459 aaKnown RBP eCLIP21.04■□□□□ 0.96
CNOT3-207ENST00000496327 C9orf131Q5VYM1 1079 aa21.04■□□□□ 0.96
CNOT3-207ENST00000496327 CDC5LQ99459 802 aaKnown RBP21.04■□□□□ 0.96
CNOT3-207ENST00000496327 RCAN3Q9UKA8 241 aa21.04■□□□□ 0.96
CNOT3-207ENST00000496327 FOXO4P98177 505 aa21.03■□□□□ 0.96
CNOT3-207ENST00000496327 FAM161AQ3B820 660 aa21.03■□□□□ 0.96
CNOT3-207ENST00000496327 INTS3Q68E01 1043 aaKnown RBP21.03■□□□□ 0.96
CNOT3-207ENST00000496327 SUCLG2Q96I99 432 aa21.03■□□□□ 0.96
CNOT3-207ENST00000496327 USP44Q9H0E7 712 aa21.03■□□□□ 0.96
CNOT3-207ENST00000496327 RNF181Q9P0P0 153 aa21.03■□□□□ 0.96
CNOT3-207ENST00000496327 SNED1Q8TER0 1413 aa21.03■□□□□ 0.96
CNOT3-207ENST00000496327 EPHA10Q5JZY3 1008 aa21.02■□□□□ 0.96
CNOT3-207ENST00000496327 SLC51AQ86UW1 340 aa21.02■□□□□ 0.96
CNOT3-207ENST00000496327 ANKRD18AQ8IVF6 992 aa21.02■□□□□ 0.96
CNOT3-207ENST00000496327 PSMD1Q99460 953 aa21.02■□□□□ 0.96
CNOT3-207ENST00000496327 TNNQ9UQP3 1299 aa21.02■□□□□ 0.96
CNOT3-207ENST00000496327 PRELPP51888 382 aa21.01■□□□□ 0.95
CNOT3-207ENST00000496327 LMBR1LQ6UX01 489 aa21.01■□□□□ 0.95
CNOT3-207ENST00000496327 CLUAP1Q96AJ1 413 aa21.01■□□□□ 0.95
CNOT3-207ENST00000496327 CHMP3Q9Y3E7 222 aa21.01■□□□□ 0.95
CNOT3-207ENST00000496327 ITGA6P23229 1130 aa21■□□□□ 0.95
CNOT3-207ENST00000496327 KAZALD1Q96I82 304 aa21■□□□□ 0.95
CNOT3-207ENST00000496327 UBTFL1P0CB47 393 aaPredicted RBP20.99■□□□□ 0.95
CNOT3-207ENST00000496327 DPP8Q6V1X1 898 aaPredicted RBP20.99■□□□□ 0.95
CNOT3-207ENST00000496327 FTSJ3Q8IY81 847 aaKnown RBP20.99■□□□□ 0.95
CNOT3-207ENST00000496327 MPNDQ8N594 471 aa20.99■□□□□ 0.95
CNOT3-207ENST00000496327 ZNF277Q9NRM2 450 aaPredicted RBP20.99■□□□□ 0.95
CNOT3-207ENST00000496327 CACNA1SQ13698 1873 aa20.98■□□□□ 0.95
CNOT3-207ENST00000496327 ANKRD18BA2A2Z9 1011 aa20.98■□□□□ 0.95
CNOT3-207ENST00000496327 IGHMBP2P38935 993 aaKnown RBP20.98■□□□□ 0.95
CNOT3-207ENST00000496327 IFIT5Q13325 482 aaKnown RBP20.98■□□□□ 0.95
CNOT3-207ENST00000496327 RABL6Q3YEC7 729 aaPredicted RBP20.98■□□□□ 0.95
CNOT3-207ENST00000496327 DZIP1LQ8IYY4 767 aaKnown RBP20.98■□□□□ 0.95
CNOT3-207ENST00000496327 BICC1Q9H694 974 aaKnown RBP20.98■□□□□ 0.95
CNOT3-207ENST00000496327 HDAC5Q9UQL6 1122 aa20.98■□□□□ 0.95
CNOT3-207ENST00000496327 COL4A1P02462 1669 aa20.98■□□□□ 0.95
CNOT3-207ENST00000496327 IARSP41252 1262 aaKnown RBP20.97■□□□□ 0.95
CNOT3-207ENST00000496327 TMEM57Q8N5G2 664 aa20.97■□□□□ 0.95
CNOT3-207ENST00000496327 SUPT20HQ8NEM7 779 aa20.97■□□□□ 0.95
CNOT3-207ENST00000496327 MEIS3Q99687 375 aa20.97■□□□□ 0.95
CNOT3-207ENST00000496327 RTFDC1Q9BY42 306 aaPredicted RBP20.97■□□□□ 0.95
CNOT3-207ENST00000496327 BSDC1Q9NW68 430 aaPredicted RBP20.97■□□□□ 0.95
CNOT3-207ENST00000496327 ZC3H4Q9UPT8 1303 aaKnown RBP20.97■□□□□ 0.95
CNOT3-207ENST00000496327 CHD4Q14839 1912 aa20.96■□□□□ 0.95
CNOT3-207ENST00000496327 CCDC57Q2TAC2 916 aa20.96■□□□□ 0.95
CNOT3-207ENST00000496327 ANKRD44Q8N8A2 993 aa20.96■□□□□ 0.95
CNOT3-207ENST00000496327 FER1L6Q2WGJ9 1857 aa20.96■□□□□ 0.95
CNOT3-207ENST00000496327 GNAI3P08754 354 aa20.95■□□□□ 0.94
CNOT3-207ENST00000496327 MS4A1P11836 297 aa20.95■□□□□ 0.94
CNOT3-207ENST00000496327 GPSM2P81274 684 aa20.95■□□□□ 0.94
CNOT3-207ENST00000496327 MPHOSPH8Q99549 860 aa20.95■□□□□ 0.94
CNOT3-207ENST00000496327 NSFL1CQ9UNZ2 370 aaKnown RBP20.95■□□□□ 0.94
CNOT3-207ENST00000496327 TAF7LQ5H9L4 462 aa20.94■□□□□ 0.94
CNOT3-207ENST00000496327 VPS33BQ9H267 617 aa20.94■□□□□ 0.94
CNOT3-207ENST00000496327 RLBP1P12271 317 aa20.93■□□□□ 0.94
CNOT3-207ENST00000496327 PODXL2Q9NZ53 605 aa20.93■□□□□ 0.94
CNOT3-207ENST00000496327 LRRFIP2Q9Y608 721 aaKnown RBP20.93■□□□□ 0.94
CNOT3-207ENST00000496327 PPIP5K2O43314 1243 aa20.92■□□□□ 0.94
CNOT3-207ENST00000496327 ITPRIPQ8IWB1 547 aa20.92■□□□□ 0.94
CNOT3-207ENST00000496327 LARGE2Q8N3Y3 721 aa20.92■□□□□ 0.94
CNOT3-207ENST00000496327 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.92■□□□□ 0.94
CNOT3-207ENST00000496327 ZNF784Q8NCA9 323 aaPredicted RBP20.92■□□□□ 0.94
CNOT3-207ENST00000496327 ANKIB1Q9P2G1 1089 aa20.92■□□□□ 0.94
CNOT3-207ENST00000496327 MINPP1Q9UNW1 487 aa20.92■□□□□ 0.94
CNOT3-207ENST00000496327 XDHP47989 1333 aa20.92■□□□□ 0.94
CNOT3-207ENST00000496327 LRRC37AA6NMS7 1700 aa20.92■□□□□ 0.94
CNOT3-207ENST00000496327 C6orf229H3BNL8 230 aa20.91■□□□□ 0.94
CNOT3-207ENST00000496327 MYH3P11055 1940 aa20.91■□□□□ 0.94
CNOT3-207ENST00000496327 PANK1Q8TE04 598 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms