RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 IGF2-ASQ6U949 168 aa7.77□□□□□ -1.17
CLK1-214ENST00000496205 DHX32Q7L7V1 743 aaKnown RBP7.77□□□□□ -1.17
CLK1-214ENST00000496205 WFDC8Q8IUA0 241 aa7.77□□□□□ -1.17
CLK1-214ENST00000496205 IDH3AP50213 366 aa7.76□□□□□ -1.17
CLK1-214ENST00000496205 ELMSAN1Q6PJG2 1045 aa7.76□□□□□ -1.17
CLK1-214ENST00000496205 PRR23CQ6ZRP0 262 aa7.76□□□□□ -1.17
CLK1-214ENST00000496205 HFE2Q6ZVN8 426 aa7.76□□□□□ -1.17
CLK1-214ENST00000496205 DLL1O00548 723 aa7.75□□□□□ -1.17
CLK1-214ENST00000496205 SASH3O75995 380 aa7.75□□□□□ -1.17
CLK1-214ENST00000496205 ALX3O95076 343 aa7.75□□□□□ -1.17
CLK1-214ENST00000496205 PCSK7Q16549 785 aa7.75□□□□□ -1.17
CLK1-214ENST00000496205 TTC9Q92623 222 aa7.75□□□□□ -1.17
CLK1-214ENST00000496205 HINFPQ9BQA5 517 aa7.75□□□□□ -1.17
CLK1-214ENST00000496205 TFIP11Q9UBB9 837 aaKnown RBP7.75□□□□□ -1.17
CLK1-214ENST00000496205 GPLD1P80108 840 aa7.74□□□□□ -1.17
CLK1-214ENST00000496205 DZIP1LQ8IYY4 767 aaKnown RBP7.74□□□□□ -1.17
CLK1-214ENST00000496205 SMG9Q9H0W8 520 aaKnown RBP7.74□□□□□ -1.17
CLK1-214ENST00000496205 GOLGA2P5Q9HBQ8 144 aa7.74□□□□□ -1.17
CLK1-214ENST00000496205 RARAP10276 462 aa7.73□□□□□ -1.17
CLK1-214ENST00000496205 EPB42P16452 691 aa7.73□□□□□ -1.17
CLK1-214ENST00000496205 CRTC2Q53ET0 693 aaPredicted RBP7.73□□□□□ -1.17
CLK1-214ENST00000496205 MCTP1Q6DN14 999 aa7.73□□□□□ -1.17
CLK1-214ENST00000496205 UBTFP17480 764 aaKnown RBP7.72□□□□□ -1.17
CLK1-214ENST00000496205 IGFBP4P22692 258 aa7.72□□□□□ -1.17
CLK1-214ENST00000496205 DPYDQ12882 1025 aa7.72□□□□□ -1.17
CLK1-214ENST00000496205 DGKZQ13574 1117 aa7.72□□□□□ -1.17
CLK1-214ENST00000496205 QTRT2Q9H974 415 aaKnown RBP7.72□□□□□ -1.17
CLK1-214ENST00000496205 USP20Q9Y2K6 914 aa7.72□□□□□ -1.17
CLK1-214ENST00000496205 MAFBQ9Y5Q3 323 aaPredicted RBP7.72□□□□□ -1.17
CLK1-214ENST00000496205 OPLAHO14841 1288 aa7.71□□□□□ -1.18
CLK1-214ENST00000496205 MICAL2O94851 1124 aa7.71□□□□□ -1.18
CLK1-214ENST00000496205 FSTP19883 344 aa7.71□□□□□ -1.18
CLK1-214ENST00000496205 ARSDP51689 593 aa7.71□□□□□ -1.18
CLK1-214ENST00000496205 PTK7Q13308 1070 aa7.71□□□□□ -1.18
CLK1-214ENST00000496205 AKTIPQ9H8T0 292 aa7.71□□□□□ -1.18
CLK1-214ENST00000496205 PCMTD2Q9NV79 361 aa7.71□□□□□ -1.18
CLK1-214ENST00000496205 J3QW42 95 aa7.7□□□□□ -1.18
CLK1-214ENST00000496205 SSTR4P31391 388 aa7.7□□□□□ -1.18
CLK1-214ENST00000496205 C11orf16Q9NQ32 467 aa7.7□□□□□ -1.18
CLK1-214ENST00000496205 BTBD11A6QL63 1104 aa7.69□□□□□ -1.18
CLK1-214ENST00000496205 F8W735 103 aaPredicted RBP7.69□□□□□ -1.18
CLK1-214ENST00000496205 EIF2AK2P19525 551 aaKnown RBP7.69□□□□□ -1.18
CLK1-214ENST00000496205 NRLP54845 237 aa7.69□□□□□ -1.18
CLK1-214ENST00000496205 KANK4Q5T7N3 995 aaPredicted RBP7.69□□□□□ -1.18
CLK1-214ENST00000496205 LARP1Q6PKG0 1096 aaKnown RBP7.69□□□□□ -1.18
CLK1-214ENST00000496205 TMEM130Q8N3G9 435 aa7.69□□□□□ -1.18
CLK1-214ENST00000496205 TLR7Q9NYK1 1049 aaKnown RBP7.69□□□□□ -1.18
CLK1-214ENST00000496205 COL17A1Q9UMD9 1497 aaPredicted RBP7.68□□□□□ -1.18
CLK1-214ENST00000496205 MED26O95402 600 aa7.68□□□□□ -1.18
CLK1-214ENST00000496205 PLD4Q96BZ4 506 aa7.68□□□□□ -1.18
CLK1-214ENST00000496205 RTCBQ9Y3I0 505 aaKnown RBP7.68□□□□□ -1.18
CLK1-214ENST00000496205 KRTAP4-8A0A0G2JLE6 195 aa7.67□□□□□ -1.18
CLK1-214ENST00000496205 CD97P48960 835 aa7.67□□□□□ -1.18
CLK1-214ENST00000496205 C11orf91Q3C1V1 193 aa7.67□□□□□ -1.18
CLK1-214ENST00000496205 GDF6Q6KF10 455 aaPredicted RBP7.67□□□□□ -1.18
CLK1-214ENST00000496205 AGGF1Q8N302 714 aaeCLIP7.67□□□□□ -1.18
CLK1-214ENST00000496205 GLMNQ92990 594 aa7.67□□□□□ -1.18
CLK1-214ENST00000496205 MRPL18Q9H0U6 180 aaKnown RBP7.67□□□□□ -1.18
CLK1-214ENST00000496205 LOC102724428A0A0B4J2F2 783 aa7.66□□□□□ -1.18
CLK1-214ENST00000496205 EGFRP00533 1210 aa7.66□□□□□ -1.18
CLK1-214ENST00000496205 SIK1P57059 783 aa7.66□□□□□ -1.18
CLK1-214ENST00000496205 FLIIQ13045 1269 aa7.66□□□□□ -1.18
CLK1-214ENST00000496205 SETDB1Q15047 1291 aa7.66□□□□□ -1.18
CLK1-214ENST00000496205 SLC51AQ86UW1 340 aa7.66□□□□□ -1.18
CLK1-214ENST00000496205 ANKMY2Q8IV38 441 aa7.66□□□□□ -1.18
CLK1-214ENST00000496205 IL22RA1Q8N6P7 574 aa7.66□□□□□ -1.18
CLK1-214ENST00000496205 LRFN2Q9ULH4 789 aa7.66□□□□□ -1.18
CLK1-214ENST00000496205 USP17L15C9J2P7 530 aa7.65□□□□□ -1.18
CLK1-214ENST00000496205 USP17L10C9JJH3 530 aa7.65□□□□□ -1.18
CLK1-214ENST00000496205 USP17L13C9JLJ4 530 aa7.65□□□□□ -1.18
CLK1-214ENST00000496205 USP17L12C9JPN9 530 aa7.65□□□□□ -1.18
CLK1-214ENST00000496205 USP17L11C9JVI0 530 aa7.65□□□□□ -1.18
CLK1-214ENST00000496205 USP17L21D6R901 530 aa7.65□□□□□ -1.18
CLK1-214ENST00000496205 USP17L18D6R9N7 530 aa7.65□□□□□ -1.18
CLK1-214ENST00000496205 USP17L22D6RA61 530 aa7.65□□□□□ -1.18
CLK1-214ENST00000496205 USP17L17D6RBQ6 530 aa7.65□□□□□ -1.18
CLK1-214ENST00000496205 USP17L19D6RCP7 530 aa7.65□□□□□ -1.18
CLK1-214ENST00000496205 USP17L20D6RJB6 530 aa7.65□□□□□ -1.18
CLK1-214ENST00000496205 MMP20O60882 483 aa7.65□□□□□ -1.18
CLK1-214ENST00000496205 XYLBO75191 536 aa7.65□□□□□ -1.18
CLK1-214ENST00000496205 WEE1P30291 646 aa7.65□□□□□ -1.18
CLK1-214ENST00000496205 USP17L24Q0WX57 530 aa7.65□□□□□ -1.18
CLK1-214ENST00000496205 Q6ZS46 218 aa7.65□□□□□ -1.18
CLK1-214ENST00000496205 C14orf37Q86TY3 774 aa7.65□□□□□ -1.18
CLK1-214ENST00000496205 FNBP4Q8N3X1 1017 aaPredicted RBP7.65□□□□□ -1.18
CLK1-214ENST00000496205 MYO19Q96H55 970 aa7.65□□□□□ -1.18
CLK1-214ENST00000496205 NSUN5Q96P11 429 aaKnown RBP7.65□□□□□ -1.18
CLK1-214ENST00000496205 ARXQ96QS3 562 aa7.65□□□□□ -1.18
CLK1-214ENST00000496205 RGL4Q8IZJ4 473 aa7.64□□□□□ -1.19
CLK1-214ENST00000496205 CMTR1Q8N1G2 835 aaKnown RBP7.64□□□□□ -1.19
CLK1-214ENST00000496205 UBL7Q96S82 380 aaPredicted RBP7.64□□□□□ -1.19
CLK1-214ENST00000496205 KCNMB2Q9Y691 235 aa7.64□□□□□ -1.19
CLK1-214ENST00000496205 ARID4AP29374 1257 aaPredicted RBP7.63□□□□□ -1.19
CLK1-214ENST00000496205 CLUAP1Q96AJ1 413 aa7.63□□□□□ -1.19
CLK1-214ENST00000496205 PPP1R12CQ9BZL4 782 aa7.63□□□□□ -1.19
CLK1-214ENST00000496205 TRIM33Q9UPN9 1127 aa7.63□□□□□ -1.19
CLK1-214ENST00000496205 FAM196BA6NMK8 535 aa7.62□□□□□ -1.19
CLK1-214ENST00000496205 FOXO3O43524 673 aa7.62□□□□□ -1.19
CLK1-214ENST00000496205 TGFB1P01137 390 aa7.62□□□□□ -1.19
CLK1-214ENST00000496205 PSAPP07602 524 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms