RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 SF3B3Q15393 1217 aaKnown RBP17.21■□□□□ 0.35
FDPS-219ENST00000495308 DDX46Q7L014 1031 aaKnown RBP17.21■□□□□ 0.35
FDPS-219ENST00000495308 C7orf43Q8WVR3 580 aa17.21■□□□□ 0.35
FDPS-219ENST00000495308 CRAMP1Q96RY5 1269 aa17.21■□□□□ 0.35
FDPS-219ENST00000495308 NFKBIEO00221 500 aa17.2■□□□□ 0.34
FDPS-219ENST00000495308 PPEF1O14829 653 aaPredicted RBP17.2■□□□□ 0.34
FDPS-219ENST00000495308 HSP90B1P14625 803 aaKnown RBP17.2■□□□□ 0.34
FDPS-219ENST00000495308 API5Q9BZZ5 524 aaKnown RBP17.2■□□□□ 0.34
FDPS-219ENST00000495308 TNNQ9UQP3 1299 aa17.2■□□□□ 0.34
FDPS-219ENST00000495308 GRM8O00222 908 aa17.19■□□□□ 0.34
FDPS-219ENST00000495308 CTSWP56202 376 aa17.19■□□□□ 0.34
FDPS-219ENST00000495308 GRAPQ13588 217 aa17.19■□□□□ 0.34
FDPS-219ENST00000495308 GRAPLQ8TC17 118 aaPredicted RBP17.19■□□□□ 0.34
FDPS-219ENST00000495308 C9orf78Q9NZ63 289 aaPredicted RBP17.19■□□□□ 0.34
FDPS-219ENST00000495308 YY1P25490 414 aa17.18■□□□□ 0.34
FDPS-219ENST00000495308 CCDC152Q4G0S7 254 aa17.18■□□□□ 0.34
FDPS-219ENST00000495308 CCDC93Q567U6 631 aa17.18■□□□□ 0.34
FDPS-219ENST00000495308 CELF1Q92879 486 aaKnown RBP17.18■□□□□ 0.34
FDPS-219ENST00000495308 SEC31BQ9NQW1 1179 aa17.18■□□□□ 0.34
FDPS-219ENST00000495308 SNED1Q8TER0 1413 aa17.18■□□□□ 0.34
FDPS-219ENST00000495308 PRELPP51888 382 aa17.17■□□□□ 0.34
FDPS-219ENST00000495308 TTLL11Q8NHH1 800 aa17.17■□□□□ 0.34
FDPS-219ENST00000495308 ARHGAP45Q92619 1136 aa17.17■□□□□ 0.34
FDPS-219ENST00000495308 NBPF7P0C2Y1 421 aaPredicted RBP17.16■□□□□ 0.34
FDPS-219ENST00000495308 TRIM27P14373 513 aa17.16■□□□□ 0.34
FDPS-219ENST00000495308 CCT4P50991 539 aaKnown RBP17.16■□□□□ 0.34
FDPS-219ENST00000495308 SOGA3Q5TF21 947 aa17.16■□□□□ 0.34
FDPS-219ENST00000495308 ATF7IPQ6VMQ6 1270 aa17.16■□□□□ 0.34
FDPS-219ENST00000495308 CLUAP1Q96AJ1 413 aa17.16■□□□□ 0.34
FDPS-219ENST00000495308 PLA2G12BQ9BX93 195 aa17.16■□□□□ 0.34
FDPS-219ENST00000495308 GREM2Q9H772 168 aa17.16■□□□□ 0.34
FDPS-219ENST00000495308 LTBP1Q14766 1721 aa17.16■□□□□ 0.34
FDPS-219ENST00000495308 A0A1B0GUL6 1792 aa17.15■□□□□ 0.34
FDPS-219ENST00000495308 IPO8O15397 1037 aaKnown RBP17.15■□□□□ 0.34
FDPS-219ENST00000495308 BBOX1O75936 387 aa17.15■□□□□ 0.34
FDPS-219ENST00000495308 FOXO4P98177 505 aa17.15■□□□□ 0.34
FDPS-219ENST00000495308 EPHA10Q5JZY3 1008 aa17.15■□□□□ 0.34
FDPS-219ENST00000495308 C9orf131Q5VYM1 1079 aa17.15■□□□□ 0.34
FDPS-219ENST00000495308 ZKSCAN2Q63HK3 967 aa17.15■□□□□ 0.34
FDPS-219ENST00000495308 SUCLG2Q96I99 432 aa17.15■□□□□ 0.34
FDPS-219ENST00000495308 FAM161AQ3B820 660 aa17.14■□□□□ 0.33
FDPS-219ENST00000495308 USP44Q9H0E7 712 aa17.14■□□□□ 0.33
FDPS-219ENST00000495308 TAOK3Q9H2K8 898 aa17.14■□□□□ 0.33
FDPS-219ENST00000495308 RNF181Q9P0P0 153 aa17.14■□□□□ 0.33
FDPS-219ENST00000495308 ATP6V0A2Q9Y487 856 aa17.14■□□□□ 0.33
FDPS-219ENST00000495308 UTYO14607 1347 aa17.14■□□□□ 0.33
FDPS-219ENST00000495308 DUOX1Q9NRD9 1551 aa17.14■□□□□ 0.33
FDPS-219ENST00000495308 RTL9Q8NET4 1388 aa17.14■□□□□ 0.33
FDPS-219ENST00000495308 CSF1RP07333 972 aa17.13■□□□□ 0.33
FDPS-219ENST00000495308 RTKN2Q8IZC4 609 aa17.13■□□□□ 0.33
FDPS-219ENST00000495308 KAZALD1Q96I82 304 aa17.13■□□□□ 0.33
FDPS-219ENST00000495308 RCAN3Q9UKA8 241 aa17.13■□□□□ 0.33
FDPS-219ENST00000495308 LTBP3Q9NS15 1303 aa17.13■□□□□ 0.33
FDPS-219ENST00000495308 LMNB1P20700 586 aa17.12■□□□□ 0.33
FDPS-219ENST00000495308 RPS8P62241 208 aaKnown RBP17.12■□□□□ 0.33
FDPS-219ENST00000495308 FKBP4Q02790 459 aaKnown RBP eCLIP17.12■□□□□ 0.33
FDPS-219ENST00000495308 INTS3Q68E01 1043 aaKnown RBP17.12■□□□□ 0.33
FDPS-219ENST00000495308 LMBR1LQ6UX01 489 aa17.12■□□□□ 0.33
FDPS-219ENST00000495308 SP8Q8IXZ3 490 aa17.12■□□□□ 0.33
FDPS-219ENST00000495308 CHMP3Q9Y3E7 222 aa17.12■□□□□ 0.33
FDPS-219ENST00000495308 ITGA6P23229 1130 aa17.11■□□□□ 0.33
FDPS-219ENST00000495308 CC2D2BQ6DHV5 1058 aa17.11■□□□□ 0.33
FDPS-219ENST00000495308 TMC4Q7Z404 712 aa17.11■□□□□ 0.33
FDPS-219ENST00000495308 ANKRD18AQ8IVF6 992 aa17.11■□□□□ 0.33
FDPS-219ENST00000495308 TMX4Q9H1E5 349 aaPredicted RBP17.11■□□□□ 0.33
FDPS-219ENST00000495308 BICC1Q9H694 974 aaKnown RBP17.11■□□□□ 0.33
FDPS-219ENST00000495308 ZNF277Q9NRM2 450 aaPredicted RBP17.11■□□□□ 0.33
FDPS-219ENST00000495308 COL4A5P29400 1685 aa17.1■□□□□ 0.33
FDPS-219ENST00000495308 TMEM57Q8N5G2 664 aa17.1■□□□□ 0.33
FDPS-219ENST00000495308 CDC5LQ99459 802 aaKnown RBP17.1■□□□□ 0.33
FDPS-219ENST00000495308 MEIS3Q99687 375 aa17.1■□□□□ 0.33
FDPS-219ENST00000495308 RLBP1P12271 317 aa17.09■□□□□ 0.33
FDPS-219ENST00000495308 DPP8Q6V1X1 898 aaPredicted RBP17.09■□□□□ 0.33
FDPS-219ENST00000495308 FTSJ3Q8IY81 847 aaKnown RBP17.09■□□□□ 0.33
FDPS-219ENST00000495308 ANKRD44Q8N8A2 993 aa17.09■□□□□ 0.33
FDPS-219ENST00000495308 PSMD1Q99460 953 aa17.09■□□□□ 0.33
FDPS-219ENST00000495308 ANKRD18BA2A2Z9 1011 aa17.08■□□□□ 0.32
FDPS-219ENST00000495308 PLIN1O60240 522 aa17.08■□□□□ 0.32
FDPS-219ENST00000495308 UBTFL1P0CB47 393 aaPredicted RBP17.08■□□□□ 0.32
FDPS-219ENST00000495308 GPSM2P81274 684 aa17.08■□□□□ 0.32
FDPS-219ENST00000495308 DZIP1LQ8IYY4 767 aaKnown RBP17.08■□□□□ 0.32
FDPS-219ENST00000495308 MPNDQ8N594 471 aa17.08■□□□□ 0.32
FDPS-219ENST00000495308 IGHMBP2P38935 993 aaKnown RBP17.07■□□□□ 0.32
FDPS-219ENST00000495308 IARSP41252 1262 aaKnown RBP17.07■□□□□ 0.32
FDPS-219ENST00000495308 IFIT5Q13325 482 aaKnown RBP17.07■□□□□ 0.32
FDPS-219ENST00000495308 RABL6Q3YEC7 729 aaPredicted RBP17.07■□□□□ 0.32
FDPS-219ENST00000495308 GRIPAP1Q4V328 841 aa17.07■□□□□ 0.32
FDPS-219ENST00000495308 ZNF526Q8TF50 670 aaPredicted RBP17.07■□□□□ 0.32
FDPS-219ENST00000495308 ZNF594Q96JF6 807 aaPredicted RBP17.07■□□□□ 0.32
FDPS-219ENST00000495308 NSFL1CQ9UNZ2 370 aaKnown RBP17.07■□□□□ 0.32
FDPS-219ENST00000495308 CCDC57Q2TAC2 916 aa17.06■□□□□ 0.32
FDPS-219ENST00000495308 ZNF784Q8NCA9 323 aaPredicted RBP17.06■□□□□ 0.32
FDPS-219ENST00000495308 PANK1Q8TE04 598 aa17.06■□□□□ 0.32
FDPS-219ENST00000495308 BSDC1Q9NW68 430 aaPredicted RBP17.06■□□□□ 0.32
FDPS-219ENST00000495308 LRRFIP2Q9Y608 721 aaKnown RBP17.06■□□□□ 0.32
FDPS-219ENST00000495308 AOC3Q16853 763 aa17.05■□□□□ 0.32
FDPS-219ENST00000495308 TAF7LQ5H9L4 462 aa17.05■□□□□ 0.32
FDPS-219ENST00000495308 ITPRIPQ8IWB1 547 aa17.05■□□□□ 0.32
FDPS-219ENST00000495308 GPR101Q96P66 508 aaPredicted RBP17.05■□□□□ 0.32
FDPS-219ENST00000495308 MPHOSPH8Q99549 860 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms