RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 ABCC4O15439 1325 aa15.23■□□□□ 0.03
CSNK1E-213ENST00000495232 SLX4Q8IY92 1834 aa15.23■□□□□ 0.03
CSNK1E-213ENST00000495232 PPEF1O14829 653 aaPredicted RBP15.23■□□□□ 0.03
CSNK1E-213ENST00000495232 BBOX1O75936 387 aa15.23■□□□□ 0.03
CSNK1E-213ENST00000495232 GRAPQ13588 217 aa15.23■□□□□ 0.03
CSNK1E-213ENST00000495232 GRAPLQ8TC17 118 aaPredicted RBP15.23■□□□□ 0.03
CSNK1E-213ENST00000495232 CCDC85AQ96PX6 553 aaPredicted RBP15.23■□□□□ 0.03
CSNK1E-213ENST00000495232 MYH3P11055 1940 aa15.23■□□□□ 0.03
CSNK1E-213ENST00000495232 TRIM27P14373 513 aa15.22■□□□□ 0.03
CSNK1E-213ENST00000495232 CCDC93Q567U6 631 aa15.22■□□□□ 0.03
CSNK1E-213ENST00000495232 CLUAP1Q96AJ1 413 aa15.22■□□□□ 0.03
CSNK1E-213ENST00000495232 PLA2G12BQ9BX93 195 aa15.22■□□□□ 0.03
CSNK1E-213ENST00000495232 MS4A1P11836 297 aa15.21■□□□□ 0.03
CSNK1E-213ENST00000495232 CASP7P55210 303 aa15.21■□□□□ 0.03
CSNK1E-213ENST00000495232 CC2D2BQ6DHV5 1058 aa15.21■□□□□ 0.03
CSNK1E-213ENST00000495232 TMC4Q7Z404 712 aa15.21■□□□□ 0.03
CSNK1E-213ENST00000495232 RTKN2Q8IZC4 609 aa15.21■□□□□ 0.03
CSNK1E-213ENST00000495232 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.21■□□□□ 0.03
CSNK1E-213ENST00000495232 TTLL11Q8NHH1 800 aa15.21■□□□□ 0.03
CSNK1E-213ENST00000495232 HDAC5Q9UQL6 1122 aa15.21■□□□□ 0.03
CSNK1E-213ENST00000495232 CHMP3Q9Y3E7 222 aa15.21■□□□□ 0.03
CSNK1E-213ENST00000495232 CHD4Q14839 1912 aa15.2■□□□□ 0.02
CSNK1E-213ENST00000495232 NBPF7P0C2Y1 421 aaPredicted RBP15.2■□□□□ 0.02
CSNK1E-213ENST00000495232 GRIPAP1Q4V328 841 aa15.2■□□□□ 0.02
CSNK1E-213ENST00000495232 INTS3Q68E01 1043 aaKnown RBP15.2■□□□□ 0.02
CSNK1E-213ENST00000495232 DZIP1LQ8IYY4 767 aaKnown RBP15.2■□□□□ 0.02
CSNK1E-213ENST00000495232 CDC5LQ99459 802 aaKnown RBP15.2■□□□□ 0.02
CSNK1E-213ENST00000495232 UTYO14607 1347 aa15.19■□□□□ 0.02
CSNK1E-213ENST00000495232 UBTFL1P0CB47 393 aaPredicted RBP15.19■□□□□ 0.02
CSNK1E-213ENST00000495232 RPS8P62241 208 aaKnown RBP15.19■□□□□ 0.02
CSNK1E-213ENST00000495232 ANKRD18AQ8IVF6 992 aa15.19■□□□□ 0.02
CSNK1E-213ENST00000495232 C7orf43Q8WVR3 580 aa15.19■□□□□ 0.02
CSNK1E-213ENST00000495232 USP44Q9H0E7 712 aa15.19■□□□□ 0.02
CSNK1E-213ENST00000495232 GREM2Q9H772 168 aa15.19■□□□□ 0.02
CSNK1E-213ENST00000495232 SEC31BQ9NQW1 1179 aa15.19■□□□□ 0.02
CSNK1E-213ENST00000495232 ATP6V0A2Q9Y487 856 aa15.19■□□□□ 0.02
CSNK1E-213ENST00000495232 CSF1RP07333 972 aa15.18■□□□□ 0.02
CSNK1E-213ENST00000495232 LMBR1LQ6UX01 489 aa15.18■□□□□ 0.02
CSNK1E-213ENST00000495232 SP8Q8IXZ3 490 aa15.18■□□□□ 0.02
CSNK1E-213ENST00000495232 CELF1Q92879 486 aaKnown RBP15.18■□□□□ 0.02
CSNK1E-213ENST00000495232 TAOK3Q9H2K8 898 aa15.18■□□□□ 0.02
CSNK1E-213ENST00000495232 TAF1P21675 1872 aa15.18■□□□□ 0.02
CSNK1E-213ENST00000495232 RTL9Q8NET4 1388 aa15.17■□□□□ 0.02
CSNK1E-213ENST00000495232 ANKRD18BA2A2Z9 1011 aa15.17■□□□□ 0.02
CSNK1E-213ENST00000495232 GNAI3P08754 354 aa15.17■□□□□ 0.02
CSNK1E-213ENST00000495232 ITGA6P23229 1130 aa15.17■□□□□ 0.02
CSNK1E-213ENST00000495232 IGHMBP2P38935 993 aaKnown RBP15.17■□□□□ 0.02
CSNK1E-213ENST00000495232 FOXO4P98177 505 aa15.17■□□□□ 0.02
CSNK1E-213ENST00000495232 IFIT5Q13325 482 aaKnown RBP15.17■□□□□ 0.02
CSNK1E-213ENST00000495232 CCDC57Q2TAC2 916 aa15.17■□□□□ 0.02
CSNK1E-213ENST00000495232 TAF7LQ5H9L4 462 aa15.17■□□□□ 0.02
CSNK1E-213ENST00000495232 OLFM4Q6UX06 510 aa15.17■□□□□ 0.02
CSNK1E-213ENST00000495232 TMEM57Q8N5G2 664 aa15.17■□□□□ 0.02
CSNK1E-213ENST00000495232 SUCLG2Q96I99 432 aa15.17■□□□□ 0.02
CSNK1E-213ENST00000495232 TNNQ9UQP3 1299 aa15.17■□□□□ 0.02
CSNK1E-213ENST00000495232 NFKBIEO00221 500 aa15.16■□□□□ 0.02
CSNK1E-213ENST00000495232 LMNB1P20700 586 aa15.16■□□□□ 0.02
CSNK1E-213ENST00000495232 YY1P25490 414 aa15.16■□□□□ 0.02
CSNK1E-213ENST00000495232 FKBP4Q02790 459 aaKnown RBP eCLIP15.16■□□□□ 0.02
CSNK1E-213ENST00000495232 RASSF7Q02833 373 aa15.16■□□□□ 0.02
CSNK1E-213ENST00000495232 FAM161AQ3B820 660 aa15.16■□□□□ 0.02
CSNK1E-213ENST00000495232 ITPRIPQ8IWB1 547 aa15.16■□□□□ 0.02
CSNK1E-213ENST00000495232 MPHOSPH8Q99549 860 aa15.16■□□□□ 0.02
CSNK1E-213ENST00000495232 BICC1Q9H694 974 aaKnown RBP15.16■□□□□ 0.02
CSNK1E-213ENST00000495232 FER1L6Q2WGJ9 1857 aa15.16■□□□□ 0.02
CSNK1E-213ENST00000495232 EPHA10Q5JZY3 1008 aa15.15■□□□□ 0.02
CSNK1E-213ENST00000495232 C9orf131Q5VYM1 1079 aa15.15■□□□□ 0.02
CSNK1E-213ENST00000495232 DPP8Q6V1X1 898 aaPredicted RBP15.15■□□□□ 0.02
CSNK1E-213ENST00000495232 MPNDQ8N594 471 aa15.15■□□□□ 0.02
CSNK1E-213ENST00000495232 SUPT20HQ8NEM7 779 aa15.15■□□□□ 0.02
CSNK1E-213ENST00000495232 RNF181Q9P0P0 153 aa15.15■□□□□ 0.02
CSNK1E-213ENST00000495232 LTBP3Q9NS15 1303 aa15.15■□□□□ 0.02
CSNK1E-213ENST00000495232 PSMD1Q99460 953 aa15.14■□□□□ 0.01
CSNK1E-213ENST00000495232 MEIS3Q99687 375 aa15.14■□□□□ 0.01
CSNK1E-213ENST00000495232 BSDC1Q9NW68 430 aaPredicted RBP15.14■□□□□ 0.01
CSNK1E-213ENST00000495232 ANKIB1Q9P2G1 1089 aa15.14■□□□□ 0.01
CSNK1E-213ENST00000495232 NSFL1CQ9UNZ2 370 aaKnown RBP15.14■□□□□ 0.01
CSNK1E-213ENST00000495232 PLIN1O60240 522 aa15.13■□□□□ 0.01
CSNK1E-213ENST00000495232 PANK1Q8TE04 598 aa15.13■□□□□ 0.01
CSNK1E-213ENST00000495232 KAZALD1Q96I82 304 aa15.13■□□□□ 0.01
CSNK1E-213ENST00000495232 SBF1O95248 1867 aa15.12■□□□□ 0.01
CSNK1E-213ENST00000495232 CCDC88AQ3V6T2 1871 aa15.12■□□□□ 0.01
CSNK1E-213ENST00000495232 GNAI2P04899 355 aa15.12■□□□□ 0.01
CSNK1E-213ENST00000495232 RLBP1P12271 317 aa15.12■□□□□ 0.01
CSNK1E-213ENST00000495232 RABL6Q3YEC7 729 aaPredicted RBP15.12■□□□□ 0.01
CSNK1E-213ENST00000495232 ZNF277Q9NRM2 450 aaPredicted RBP15.12■□□□□ 0.01
CSNK1E-213ENST00000495232 LRRFIP2Q9Y608 721 aaKnown RBP15.12■□□□□ 0.01
CSNK1E-213ENST00000495232 SPEF2Q9C093 1822 aa15.12■□□□□ 0.01
CSNK1E-213ENST00000495232 C6orf229H3BNL8 230 aa15.11■□□□□ 0.01
CSNK1E-213ENST00000495232 IARSP41252 1262 aaKnown RBP15.11■□□□□ 0.01
CSNK1E-213ENST00000495232 LDHAL6AQ6ZMR3 332 aa15.11■□□□□ 0.01
CSNK1E-213ENST00000495232 ANKRD44Q8N8A2 993 aa15.11■□□□□ 0.01
CSNK1E-213ENST00000495232 CHMP4BQ9H444 224 aaKnown RBP15.11■□□□□ 0.01
CSNK1E-213ENST00000495232 CNNM1Q9NRU3 951 aa15.11■□□□□ 0.01
CSNK1E-213ENST00000495232 LRRC37AA6NMS7 1700 aa15.1■□□□□ 0.01
CSNK1E-213ENST00000495232 GPSM2P81274 684 aa15.1■□□□□ 0.01
CSNK1E-213ENST00000495232 PDE3AQ14432 1141 aa15.1■□□□□ 0.01
CSNK1E-213ENST00000495232 SLC51AQ86UW1 340 aa15.1■□□□□ 0.01
CSNK1E-213ENST00000495232 LARGE2Q8N3Y3 721 aa15.1■□□□□ 0.01
CSNK1E-213ENST00000495232 JDP2Q8WYK2 163 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms