RNA–Protein interactions for RNA: ENST00000494934.5

SRRM1-218, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-218ENST00000494934 LAMC2Q13753 1193 aa8.74□□□□□ -1.01
SRRM1-218ENST00000494934 TRIP4Q15650 581 aaPredicted RBP8.74□□□□□ -1.01
SRRM1-218ENST00000494934 SLC30A3Q99726 388 aa8.74□□□□□ -1.01
SRRM1-218ENST00000494934 DUSP9Q99956 384 aaKnown RBP8.74□□□□□ -1.01
SRRM1-218ENST00000494934 RTCBQ9Y3I0 505 aaKnown RBP8.74□□□□□ -1.01
SRRM1-218ENST00000494934 PNMA6FA0A0J9YX94 578 aa8.73□□□□□ -1.01
SRRM1-218ENST00000494934 PRPF40AO75400 957 aaKnown RBP8.73□□□□□ -1.01
SRRM1-218ENST00000494934 ENOX2Q16206 610 aaKnown RBP8.73□□□□□ -1.01
SRRM1-218ENST00000494934 FAM182BQ5T319 152 aa8.73□□□□□ -1.01
SRRM1-218ENST00000494934 NUDT16Q96DE0 195 aaKnown RBP8.73□□□□□ -1.01
SRRM1-218ENST00000494934 GGNBP2Q9H3C7 697 aa8.73□□□□□ -1.01
SRRM1-218ENST00000494934 MARK1Q9P0L2 795 aa8.73□□□□□ -1.01
SRRM1-218ENST00000494934 PARP2Q9UGN5 583 aa8.73□□□□□ -1.01
SRRM1-218ENST00000494934 KCNH4Q9UQ05 1017 aa8.73□□□□□ -1.01
SRRM1-218ENST00000494934 ORC1Q13415 861 aa8.72□□□□□ -1.01
SRRM1-218ENST00000494934 TRERF1Q96PN7 1200 aa8.72□□□□□ -1.01
SRRM1-218ENST00000494934 BACH2Q9BYV9 841 aa8.72□□□□□ -1.01
SRRM1-218ENST00000494934 GSX2Q9BZM3 304 aa8.72□□□□□ -1.01
SRRM1-218ENST00000494934 FOXR1Q6PIV2 292 aa8.71□□□□□ -1.02
SRRM1-218ENST00000494934 MBIPQ9NS73 344 aa8.71□□□□□ -1.02
SRRM1-218ENST00000494934 KLF15Q9UIH9 416 aa8.71□□□□□ -1.02
SRRM1-218ENST00000494934 PHF24Q9UPV7 400 aa8.71□□□□□ -1.02
SRRM1-218ENST00000494934 LOC105371045A0A1W2PR82 267 aa8.7□□□□□ -1.02
SRRM1-218ENST00000494934 EGFRP00533 1210 aa8.7□□□□□ -1.02
SRRM1-218ENST00000494934 CNTNAP3BQ96NU0 1288 aa8.7□□□□□ -1.02
SRRM1-218ENST00000494934 CNTNAP3Q9BZ76 1288 aa8.7□□□□□ -1.02
SRRM1-218ENST00000494934 LORP23490 312 aaPredicted RBP8.69□□□□□ -1.02
SRRM1-218ENST00000494934 USP5P45974 858 aa8.69□□□□□ -1.02
SRRM1-218ENST00000494934 TMC4Q7Z404 712 aa8.69□□□□□ -1.02
SRRM1-218ENST00000494934 CSRNP1Q96S65 589 aa8.69□□□□□ -1.02
SRRM1-218ENST00000494934 ZFATQ9P243 1243 aa8.69□□□□□ -1.02
SRRM1-218ENST00000494934 MX2P20592 715 aa8.68□□□□□ -1.02
SRRM1-218ENST00000494934 DAB2P98082 770 aa8.68□□□□□ -1.02
SRRM1-218ENST00000494934 HDLBPQ00341 1268 aaKnown RBP8.68□□□□□ -1.02
SRRM1-218ENST00000494934 SPEM2Q0P670 501 aa8.68□□□□□ -1.02
SRRM1-218ENST00000494934 RAB44Q7Z6P3 723 aaPredicted RBP8.68□□□□□ -1.02
SRRM1-218ENST00000494934 CMTR1Q8N1G2 835 aaKnown RBP8.68□□□□□ -1.02
SRRM1-218ENST00000494934 C11orf16Q9NQ32 467 aa8.68□□□□□ -1.02
SRRM1-218ENST00000494934 IGF1RP08069 1367 aa8.68□□□□□ -1.02
SRRM1-218ENST00000494934 SLURP2P0DP57 97 aa8.67□□□□□ -1.02
SRRM1-218ENST00000494934 ATP2B2Q01814 1243 aa8.67□□□□□ -1.02
SRRM1-218ENST00000494934 XPCQ01831 940 aaPredicted RBP8.67□□□□□ -1.02
SRRM1-218ENST00000494934 C8orf34Q49A92 452 aa8.67□□□□□ -1.02
SRRM1-218ENST00000494934 MDFIQ99750 246 aa8.67□□□□□ -1.02
SRRM1-218ENST00000494934 EIF1AYO14602 144 aaKnown RBP8.66□□□□□ -1.02
SRRM1-218ENST00000494934 SRSF11Q05519 484 aaKnown RBP8.66□□□□□ -1.02
SRRM1-218ENST00000494934 CCINQ13939 588 aa8.66□□□□□ -1.02
SRRM1-218ENST00000494934 C1orf229Q6ZS94 237 aaPredicted RBP8.66□□□□□ -1.02
SRRM1-218ENST00000494934 PIK3R5Q8WYR1 880 aa8.66□□□□□ -1.02
SRRM1-218ENST00000494934 FOXD3Q9UJU5 478 aaPredicted RBP8.66□□□□□ -1.02
SRRM1-218ENST00000494934 WIPF1O43516 503 aa8.65□□□□□ -1.02
SRRM1-218ENST00000494934 XYLBO75191 536 aa8.65□□□□□ -1.02
SRRM1-218ENST00000494934 SASH3O75995 380 aa8.65□□□□□ -1.02
SRRM1-218ENST00000494934 ADAMTS2O95450 1211 aa8.65□□□□□ -1.02
SRRM1-218ENST00000494934 BMP4P12644 408 aa8.65□□□□□ -1.02
SRRM1-218ENST00000494934 EPB42P16452 691 aa8.65□□□□□ -1.02
SRRM1-218ENST00000494934 TARSP26639 723 aaKnown RBP8.65□□□□□ -1.02
SRRM1-218ENST00000494934 PSMD2Q13200 908 aa8.65□□□□□ -1.02
SRRM1-218ENST00000494934 C9orf131Q5VYM1 1079 aa8.65□□□□□ -1.02
SRRM1-218ENST00000494934 USPL1Q5W0Q7 1092 aa8.65□□□□□ -1.02
SRRM1-218ENST00000494934 ACDQ96AP0 544 aa8.65□□□□□ -1.02
SRRM1-218ENST00000494934 USP35Q9P2H5 1018 aa8.65□□□□□ -1.02
SRRM1-218ENST00000494934 VTI1BQ9UEU0 232 aa8.65□□□□□ -1.02
SRRM1-218ENST00000494934 ZNF468Q5VIY5 522 aaPredicted RBP8.64□□□□□ -1.03
SRRM1-218ENST00000494934 ALG1LQ6GMV1 187 aa8.64□□□□□ -1.03
SRRM1-218ENST00000494934 XKR5Q6UX68 686 aa8.64□□□□□ -1.03
SRRM1-218ENST00000494934 PI16Q6UXB8 463 aa8.64□□□□□ -1.03
SRRM1-218ENST00000494934 WHAMMQ8TF30 809 aa8.64□□□□□ -1.03
SRRM1-218ENST00000494934 FAM13BQ9NYF5 915 aa8.64□□□□□ -1.03
SRRM1-218ENST00000494934 UBAP1LF5GYI3 381 aa8.63□□□□□ -1.03
SRRM1-218ENST00000494934 SCAMP3O14828 347 aaKnown RBP8.63□□□□□ -1.03
SRRM1-218ENST00000494934 SORBS3O60504 671 aa8.63□□□□□ -1.03
SRRM1-218ENST00000494934 CTSHP09668 335 aa8.63□□□□□ -1.03
SRRM1-218ENST00000494934 ARAFP10398 606 aa8.63□□□□□ -1.03
SRRM1-218ENST00000494934 PCSK2P16519 638 aa8.63□□□□□ -1.03
SRRM1-218ENST00000494934 GNA15P30679 374 aa8.63□□□□□ -1.03
SRRM1-218ENST00000494934 PCBP4P57723 403 aaKnown RBP8.63□□□□□ -1.03
SRRM1-218ENST00000494934 RAD51AP2Q09MP3 1159 aa8.63□□□□□ -1.03
SRRM1-218ENST00000494934 SYT9Q86SS6 491 aa8.63□□□□□ -1.03
SRRM1-218ENST00000494934 METTL16Q86W50 562 aaKnown RBP8.63□□□□□ -1.03
SRRM1-218ENST00000494934 FCHSD1Q86WN1 690 aa8.63□□□□□ -1.03
SRRM1-218ENST00000494934 TMEM63CQ9P1W3 806 aa8.63□□□□□ -1.03
SRRM1-218ENST00000494934 NFKB1P19838 968 aa8.62□□□□□ -1.03
SRRM1-218ENST00000494934 IRS1P35568 1242 aa8.62□□□□□ -1.03
SRRM1-218ENST00000494934 MAP2K3P46734 347 aa8.62□□□□□ -1.03
SRRM1-218ENST00000494934 FGD1P98174 961 aa8.62□□□□□ -1.03
SRRM1-218ENST00000494934 FANCCQ00597 558 aa8.62□□□□□ -1.03
SRRM1-218ENST00000494934 KRT25Q7Z3Z0 450 aa8.62□□□□□ -1.03
SRRM1-218ENST00000494934 TMEM87AQ8NBN3 555 aa8.62□□□□□ -1.03
SRRM1-218ENST00000494934 FBF1Q8TES7 1133 aa8.62□□□□□ -1.03
SRRM1-218ENST00000494934 BHMTQ93088 406 aa8.62□□□□□ -1.03
SRRM1-218ENST00000494934 C8orf37Q96NL8 207 aa8.62□□□□□ -1.03
SRRM1-218ENST00000494934 MRS2Q9HD23 443 aa8.62□□□□□ -1.03
SRRM1-218ENST00000494934 AVENQ9NQS1 362 aaPredicted RBP8.62□□□□□ -1.03
SRRM1-218ENST00000494934 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.62□□□□□ -1.03
SRRM1-218ENST00000494934 ZBTB42B2RXF5 422 aa8.61□□□□□ -1.03
SRRM1-218ENST00000494934 TNFRSF21O75509 655 aa8.61□□□□□ -1.03
SRRM1-218ENST00000494934 ERCC5P28715 1186 aaPredicted RBP8.61□□□□□ -1.03
SRRM1-218ENST00000494934 LYPD4Q6UWN0 246 aa8.61□□□□□ -1.03
SRRM1-218ENST00000494934 NLRP13Q86W25 1043 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms