RNA–Protein interactions for RNA: ENST00000494836.2

YIF1A-209, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-209ENST00000494836 GRAPLQ8TC17 118 aaPredicted RBP20.55■□□□□ 0.88
YIF1A-209ENST00000494836 C9orf78Q9NZ63 289 aaPredicted RBP20.55■□□□□ 0.88
YIF1A-209ENST00000494836 BCAR3O75815 825 aa20.54■□□□□ 0.88
YIF1A-209ENST00000494836 BBOX1O75936 387 aa20.54■□□□□ 0.88
YIF1A-209ENST00000494836 CASP7P55210 303 aa20.54■□□□□ 0.88
YIF1A-209ENST00000494836 CC2D2BQ6DHV5 1058 aa20.54■□□□□ 0.88
YIF1A-209ENST00000494836 OLFM4Q6UX06 510 aa20.54■□□□□ 0.88
YIF1A-209ENST00000494836 TAOK3Q9H2K8 898 aa20.54■□□□□ 0.88
YIF1A-209ENST00000494836 ARHGAP45Q92619 1136 aa20.53■□□□□ 0.88
YIF1A-209ENST00000494836 PLA2G12BQ9BX93 195 aa20.53■□□□□ 0.88
YIF1A-209ENST00000494836 TMX4Q9H1E5 349 aaPredicted RBP20.53■□□□□ 0.88
YIF1A-209ENST00000494836 LTBP3Q9NS15 1303 aa20.53■□□□□ 0.88
YIF1A-209ENST00000494836 TAF1P21675 1872 aa20.52■□□□□ 0.88
YIF1A-209ENST00000494836 IPO8O15397 1037 aaKnown RBP20.52■□□□□ 0.88
YIF1A-209ENST00000494836 RTKN2Q8IZC4 609 aa20.52■□□□□ 0.88
YIF1A-209ENST00000494836 FRAT1Q92837 279 aaPredicted RBP20.52■□□□□ 0.88
YIF1A-209ENST00000494836 YTHDC1Q96MU7 727 aaKnown RBP20.52■□□□□ 0.88
YIF1A-209ENST00000494836 CCDC85AQ96PX6 553 aaPredicted RBP20.52■□□□□ 0.88
YIF1A-209ENST00000494836 ATP6V0A2Q9Y487 856 aa20.52■□□□□ 0.88
YIF1A-209ENST00000494836 SBF1O95248 1867 aa20.52■□□□□ 0.87
YIF1A-209ENST00000494836 LMNB1P20700 586 aa20.51■□□□□ 0.87
YIF1A-209ENST00000494836 CCT4P50991 539 aaKnown RBP20.51■□□□□ 0.87
YIF1A-209ENST00000494836 C9orf131Q5VYM1 1079 aa20.51■□□□□ 0.87
YIF1A-209ENST00000494836 TMC4Q7Z404 712 aa20.51■□□□□ 0.87
YIF1A-209ENST00000494836 TTLL11Q8NHH1 800 aa20.51■□□□□ 0.87
YIF1A-209ENST00000494836 CELF1Q92879 486 aaKnown RBP20.51■□□□□ 0.87
YIF1A-209ENST00000494836 RNF181Q9P0P0 153 aa20.51■□□□□ 0.87
YIF1A-209ENST00000494836 GRIPAP1Q4V328 841 aa20.5■□□□□ 0.87
YIF1A-209ENST00000494836 SEC31BQ9NQW1 1179 aa20.5■□□□□ 0.87
YIF1A-209ENST00000494836 SNED1Q8TER0 1413 aa20.5■□□□□ 0.87
YIF1A-209ENST00000494836 RTL9Q8NET4 1388 aa20.49■□□□□ 0.87
YIF1A-209ENST00000494836 COL4A1P02462 1669 aa20.49■□□□□ 0.87
YIF1A-209ENST00000494836 FKBP4Q02790 459 aaKnown RBP eCLIP20.49■□□□□ 0.87
YIF1A-209ENST00000494836 ATF7IPQ6VMQ6 1270 aa20.49■□□□□ 0.87
YIF1A-209ENST00000494836 SLC51AQ86UW1 340 aa20.49■□□□□ 0.87
YIF1A-209ENST00000494836 SP8Q8IXZ3 490 aa20.49■□□□□ 0.87
YIF1A-209ENST00000494836 GREM2Q9H772 168 aa20.49■□□□□ 0.87
YIF1A-209ENST00000494836 LRRC37AA6NMS7 1700 aa20.48■□□□□ 0.87
YIF1A-209ENST00000494836 NBPF7P0C2Y1 421 aaPredicted RBP20.48■□□□□ 0.87
YIF1A-209ENST00000494836 TRIM27P14373 513 aa20.48■□□□□ 0.87
YIF1A-209ENST00000494836 PRELPP51888 382 aa20.48■□□□□ 0.87
YIF1A-209ENST00000494836 RPS8P62241 208 aaKnown RBP20.48■□□□□ 0.87
YIF1A-209ENST00000494836 ZKSCAN2Q63HK3 967 aa20.48■□□□□ 0.87
YIF1A-209ENST00000494836 CDC5LQ99459 802 aaKnown RBP20.48■□□□□ 0.87
YIF1A-209ENST00000494836 UTYO14607 1347 aa20.48■□□□□ 0.87
YIF1A-209ENST00000494836 PSMD1Q99460 953 aa20.47■□□□□ 0.87
YIF1A-209ENST00000494836 CCDC88AQ3V6T2 1871 aa20.47■□□□□ 0.87
YIF1A-209ENST00000494836 CSF1RP07333 972 aa20.46■□□□□ 0.87
YIF1A-209ENST00000494836 FOXO4P98177 505 aa20.46■□□□□ 0.87
YIF1A-209ENST00000494836 FAM161AQ3B820 660 aa20.46■□□□□ 0.87
YIF1A-209ENST00000494836 ANKRD18AQ8IVF6 992 aa20.46■□□□□ 0.87
YIF1A-209ENST00000494836 TIAM2Q8IVF5 1701 aa20.46■□□□□ 0.87
YIF1A-209ENST00000494836 SUCLG2Q96I99 432 aa20.45■□□□□ 0.86
YIF1A-209ENST00000494836 USP44Q9H0E7 712 aa20.45■□□□□ 0.86
YIF1A-209ENST00000494836 ZNF277Q9NRM2 450 aaPredicted RBP20.45■□□□□ 0.86
YIF1A-209ENST00000494836 CHMP3Q9Y3E7 222 aa20.45■□□□□ 0.86
YIF1A-209ENST00000494836 ITGA6P23229 1130 aa20.44■□□□□ 0.86
YIF1A-209ENST00000494836 EPHA10Q5JZY3 1008 aa20.44■□□□□ 0.86
YIF1A-209ENST00000494836 INTS3Q68E01 1043 aaKnown RBP20.44■□□□□ 0.86
YIF1A-209ENST00000494836 LMBR1LQ6UX01 489 aa20.44■□□□□ 0.86
YIF1A-209ENST00000494836 DPP8Q6V1X1 898 aaPredicted RBP20.44■□□□□ 0.86
YIF1A-209ENST00000494836 MPNDQ8N594 471 aa20.44■□□□□ 0.86
YIF1A-209ENST00000494836 CLUAP1Q96AJ1 413 aa20.44■□□□□ 0.86
YIF1A-209ENST00000494836 ZC3H4Q9UPT8 1303 aaKnown RBP20.44■□□□□ 0.86
YIF1A-209ENST00000494836 DICER1Q9UPY3 1922 aaKnown RBP20.43■□□□□ 0.86
YIF1A-209ENST00000494836 ZNF784Q8NCA9 323 aaPredicted RBP20.43■□□□□ 0.86
YIF1A-209ENST00000494836 RCAN3Q9UKA8 241 aa20.43■□□□□ 0.86
YIF1A-209ENST00000494836 TNNQ9UQP3 1299 aa20.43■□□□□ 0.86
YIF1A-209ENST00000494836 SPEF2Q9C093 1822 aa20.43■□□□□ 0.86
YIF1A-209ENST00000494836 ANKRD18BA2A2Z9 1011 aa20.42■□□□□ 0.86
YIF1A-209ENST00000494836 IGHMBP2P38935 993 aaKnown RBP20.42■□□□□ 0.86
YIF1A-209ENST00000494836 IARSP41252 1262 aaKnown RBP20.42■□□□□ 0.86
YIF1A-209ENST00000494836 IFIT5Q13325 482 aaKnown RBP20.42■□□□□ 0.86
YIF1A-209ENST00000494836 SUPT20HQ8NEM7 779 aa20.42■□□□□ 0.86
YIF1A-209ENST00000494836 KAZALD1Q96I82 304 aa20.42■□□□□ 0.86
YIF1A-209ENST00000494836 UBTFL1P0CB47 393 aaPredicted RBP20.41■□□□□ 0.86
YIF1A-209ENST00000494836 FTSJ3Q8IY81 847 aaKnown RBP20.41■□□□□ 0.86
YIF1A-209ENST00000494836 RTFDC1Q9BY42 306 aaPredicted RBP20.41■□□□□ 0.86
YIF1A-209ENST00000494836 BICC1Q9H694 974 aaKnown RBP20.41■□□□□ 0.86
YIF1A-209ENST00000494836 NSFL1CQ9UNZ2 370 aaKnown RBP20.41■□□□□ 0.86
YIF1A-209ENST00000494836 DUOX1Q9NRD9 1551 aa20.41■□□□□ 0.86
YIF1A-209ENST00000494836 LTBP1Q14766 1721 aa20.4■□□□□ 0.86
YIF1A-209ENST00000494836 CCDC57Q2TAC2 916 aa20.4■□□□□ 0.86
YIF1A-209ENST00000494836 BSDC1Q9NW68 430 aaPredicted RBP20.4■□□□□ 0.86
YIF1A-209ENST00000494836 GPSM2P81274 684 aa20.39■□□□□ 0.85
YIF1A-209ENST00000494836 RABL6Q3YEC7 729 aaPredicted RBP20.39■□□□□ 0.85
YIF1A-209ENST00000494836 DZIP1LQ8IYY4 767 aaKnown RBP20.39■□□□□ 0.85
YIF1A-209ENST00000494836 ZNF526Q8TF50 670 aaPredicted RBP20.39■□□□□ 0.85
YIF1A-209ENST00000494836 MPHOSPH8Q99549 860 aa20.39■□□□□ 0.85
YIF1A-209ENST00000494836 ANKIB1Q9P2G1 1089 aa20.39■□□□□ 0.85
YIF1A-209ENST00000494836 HDAC5Q9UQL6 1122 aa20.39■□□□□ 0.85
YIF1A-209ENST00000494836 PPIP5K2O43314 1243 aa20.38■□□□□ 0.85
YIF1A-209ENST00000494836 LARGE2Q8N3Y3 721 aa20.38■□□□□ 0.85
YIF1A-209ENST00000494836 TMEM57Q8N5G2 664 aa20.38■□□□□ 0.85
YIF1A-209ENST00000494836 ANKRD44Q8N8A2 993 aa20.38■□□□□ 0.85
YIF1A-209ENST00000494836 JDP2Q8WYK2 163 aa20.38■□□□□ 0.85
YIF1A-209ENST00000494836 MEIS3Q99687 375 aa20.38■□□□□ 0.85
YIF1A-209ENST00000494836 VPS33BQ9H267 617 aa20.38■□□□□ 0.85
YIF1A-209ENST00000494836 XDHP47989 1333 aa20.37■□□□□ 0.85
YIF1A-209ENST00000494836 GNAI3P08754 354 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms