RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 CASTP20810 708 aaKnown RBP12.58□□□□□ -0.4
SAMM50-206ENST00000494795 AK2P54819 239 aa12.58□□□□□ -0.4
SAMM50-206ENST00000494795 PI16Q6UXB8 463 aa12.58□□□□□ -0.4
SAMM50-206ENST00000494795 RUFY3Q7L099 469 aa12.58□□□□□ -0.4
SAMM50-206ENST00000494795 ISCA1Q9BUE6 129 aa12.58□□□□□ -0.4
SAMM50-206ENST00000494795 SNAP23O00161 211 aa12.57□□□□□ -0.4
SAMM50-206ENST00000494795 ADORA1P30542 326 aa12.57□□□□□ -0.4
SAMM50-206ENST00000494795 MCTP1Q6DN14 999 aa12.57□□□□□ -0.4
SAMM50-206ENST00000494795 SNRKQ9NRH2 765 aa12.57□□□□□ -0.4
SAMM50-206ENST00000494795 LTBP4Q8N2S1 1624 aa12.57□□□□□ -0.4
SAMM50-206ENST00000494795 CCDC191Q8NCU4 936 aa12.56□□□□□ -0.4
SAMM50-206ENST00000494795 TTC14Q96N46 770 aa12.56□□□□□ -0.4
SAMM50-206ENST00000494795 PANK2Q9BZ23 570 aa12.56□□□□□ -0.4
SAMM50-206ENST00000494795 RBM8AQ9Y5S9 174 aaKnown RBP12.56□□□□□ -0.4
SAMM50-206ENST00000494795 MCCP23508 829 aa12.56□□□□□ -0.4
SAMM50-206ENST00000494795 HSP90AB3PQ58FF7 597 aa12.56□□□□□ -0.4
SAMM50-206ENST00000494795 GAS2L3Q86XJ1 694 aa12.56□□□□□ -0.4
SAMM50-206ENST00000494795 NSFL1CQ9UNZ2 370 aaKnown RBP12.56□□□□□ -0.4
SAMM50-206ENST00000494795 NECTIN1Q15223 517 aa12.56□□□□□ -0.4
SAMM50-206ENST00000494795 KIAA1211Q6ZU35 1233 aa12.56□□□□□ -0.4
SAMM50-206ENST00000494795 GPATCH3Q96I76 525 aa12.56□□□□□ -0.4
SAMM50-206ENST00000494795 JAKMIP1Q96N16 626 aaKnown RBP12.56□□□□□ -0.4
SAMM50-206ENST00000494795 CIZ1Q9ULV3 898 aaPredicted RBP12.56□□□□□ -0.4
SAMM50-206ENST00000494795 SPATA31A1Q5TZJ5 1347 aa12.55□□□□□ -0.4
SAMM50-206ENST00000494795 CCDC171Q6TFL3 1326 aa12.55□□□□□ -0.4
SAMM50-206ENST00000494795 UBN2Q6ZU65 1347 aa12.55□□□□□ -0.4
SAMM50-206ENST00000494795 ST3GAL1Q11201 340 aa12.55□□□□□ -0.4
SAMM50-206ENST00000494795 SCARF1Q14162 830 aa12.55□□□□□ -0.4
SAMM50-206ENST00000494795 VPS53Q5VIR6 699 aa12.55□□□□□ -0.4
SAMM50-206ENST00000494795 SLIT2O94813 1529 aa12.55□□□□□ -0.4
SAMM50-206ENST00000494795 ERBB4Q15303 1308 aa12.55□□□□□ -0.4
SAMM50-206ENST00000494795 GOLIM4O00461 696 aa12.55□□□□□ -0.4
SAMM50-206ENST00000494795 ITPK1Q13572 414 aa12.55□□□□□ -0.4
SAMM50-206ENST00000494795 GREM2Q9H772 168 aa12.55□□□□□ -0.4
SAMM50-206ENST00000494795 HDAC5Q9UQL6 1122 aa12.55□□□□□ -0.4
SAMM50-206ENST00000494795 PLEKHG2Q9H7P9 1386 aa12.54□□□□□ -0.4
SAMM50-206ENST00000494795 GDPD2Q9HCC8 539 aa12.54□□□□□ -0.4
SAMM50-206ENST00000494795 ZNF609O15014 1411 aa12.54□□□□□ -0.4
SAMM50-206ENST00000494795 A0A1B0GUL7 405 aa12.54□□□□□ -0.4
SAMM50-206ENST00000494795 ANAPC15P60006 121 aa12.54□□□□□ -0.4
SAMM50-206ENST00000494795 DDB1Q16531 1140 aa12.54□□□□□ -0.4
SAMM50-206ENST00000494795 CREB3L3Q68CJ9 461 aa12.54□□□□□ -0.4
SAMM50-206ENST00000494795 NLRP10Q86W26 655 aa12.54□□□□□ -0.4
SAMM50-206ENST00000494795 NECAB1Q8N987 351 aa12.54□□□□□ -0.4
SAMM50-206ENST00000494795 COL14A1Q05707 1796 aaKnown RBP12.54□□□□□ -0.4
SAMM50-206ENST00000494795 STARD3NLO95772 234 aa12.54□□□□□ -0.4
SAMM50-206ENST00000494795 ATXN8OSP0DMR3 200 aa12.54□□□□□ -0.4
SAMM50-206ENST00000494795 ATP5JP18859 108 aa12.54□□□□□ -0.4
SAMM50-206ENST00000494795 FAM98CQ17RN3 349 aaKnown RBP12.54□□□□□ -0.4
SAMM50-206ENST00000494795 MAP3K15Q6ZN16 1313 aa12.54□□□□□ -0.4
SAMM50-206ENST00000494795 EYA2O00167 538 aa12.53□□□□□ -0.4
SAMM50-206ENST00000494795 CUL4AQ13619 759 aa12.53□□□□□ -0.4
SAMM50-206ENST00000494795 GIGYF2Q6Y7W6 1299 aaKnown RBP12.53□□□□□ -0.4
SAMM50-206ENST00000494795 SLC27A2O14975 620 aa12.53□□□□□ -0.4
SAMM50-206ENST00000494795 KIF6Q6ZMV9 814 aa12.53□□□□□ -0.4
SAMM50-206ENST00000494795 HELBQ8NG08 1087 aaPredicted RBP12.53□□□□□ -0.4
SAMM50-206ENST00000494795 MAP4K1Q92918 833 aa12.53□□□□□ -0.4
SAMM50-206ENST00000494795 INTS5Q6P9B9 1019 aaKnown RBP12.52□□□□□ -0.4
SAMM50-206ENST00000494795 RBM27Q9P2N5 1060 aaKnown RBP12.52□□□□□ -0.4
SAMM50-206ENST00000494795 DOT1LQ8TEK3 1739 aa12.52□□□□□ -0.4
SAMM50-206ENST00000494795 TAF5LO75529 589 aa12.52□□□□□ -0.41
SAMM50-206ENST00000494795 HCLS1P14317 486 aaPredicted RBP12.52□□□□□ -0.41
SAMM50-206ENST00000494795 KCNJ4P48050 445 aa12.52□□□□□ -0.41
SAMM50-206ENST00000494795 VASPP50552 380 aaPredicted RBP12.52□□□□□ -0.41
SAMM50-206ENST00000494795 C8orf37Q96NL8 207 aa12.52□□□□□ -0.41
SAMM50-206ENST00000494795 LRRC2Q9BYS8 371 aa12.52□□□□□ -0.41
SAMM50-206ENST00000494795 AHDC1Q5TGY3 1603 aaPredicted RBP12.52□□□□□ -0.41
SAMM50-206ENST00000494795 WTIPA6NIX2 430 aaPredicted RBP12.52□□□□□ -0.41
SAMM50-206ENST00000494795 PPFIA3O75145 1194 aa12.52□□□□□ -0.41
SAMM50-206ENST00000494795 PRPF40AO75400 957 aaKnown RBP12.52□□□□□ -0.41
SAMM50-206ENST00000494795 ATP6V1AP38606 617 aa12.52□□□□□ -0.41
SAMM50-206ENST00000494795 DZIP3Q86Y13 1208 aaKnown RBP12.52□□□□□ -0.41
SAMM50-206ENST00000494795 IL17RAQ96F46 866 aa12.52□□□□□ -0.41
SAMM50-206ENST00000494795 PLCH1Q4KWH8 1693 aa12.52□□□□□ -0.41
SAMM50-206ENST00000494795 MED23Q9ULK4 1368 aa12.52□□□□□ -0.41
SAMM50-206ENST00000494795 XRCC6P12956 609 aaKnown RBP eCLIP12.51□□□□□ -0.41
SAMM50-206ENST00000494795 CCDC83Q8IWF9 413 aa12.51□□□□□ -0.41
SAMM50-206ENST00000494795 GBP4Q96PP9 640 aa12.51□□□□□ -0.41
SAMM50-206ENST00000494795 HAUS7Q99871 368 aa12.51□□□□□ -0.41
SAMM50-206ENST00000494795 PHLPP1O60346 1717 aa12.51□□□□□ -0.41
SAMM50-206ENST00000494795 DDX11L8A8MPP1 907 aa12.51□□□□□ -0.41
SAMM50-206ENST00000494795 FKBP4Q02790 459 aaKnown RBP eCLIP12.51□□□□□ -0.41
SAMM50-206ENST00000494795 ME3Q16798 604 aa12.51□□□□□ -0.41
SAMM50-206ENST00000494795 CCDC57Q2TAC2 916 aa12.51□□□□□ -0.41
SAMM50-206ENST00000494795 ZBTB38Q8NAP3 1195 aaPredicted RBP12.51□□□□□ -0.41
SAMM50-206ENST00000494795 TTLL11Q8NHH1 800 aa12.51□□□□□ -0.41
SAMM50-206ENST00000494795 LMBRD1Q9NUN5 540 aa12.51□□□□□ -0.41
SAMM50-206ENST00000494795 TRMT112Q9UI30 125 aaKnown RBP12.51□□□□□ -0.41
SAMM50-206ENST00000494795 TPCN1Q9ULQ1 816 aa12.51□□□□□ -0.41
SAMM50-206ENST00000494795 ITGA6P23229 1130 aa12.5□□□□□ -0.41
SAMM50-206ENST00000494795 CRKLP46109 303 aaKnown RBP12.5□□□□□ -0.41
SAMM50-206ENST00000494795 PCCAP05165 728 aaPredicted RBP12.5□□□□□ -0.41
SAMM50-206ENST00000494795 NCLP19338 710 aaKnown RBP12.5□□□□□ -0.41
SAMM50-206ENST00000494795 GPT2Q8TD30 523 aa12.5□□□□□ -0.41
SAMM50-206ENST00000494795 RUFY2Q8WXA3 655 aa12.5□□□□□ -0.41
SAMM50-206ENST00000494795 RPAP1Q9BWH6 1393 aaPredicted RBP12.5□□□□□ -0.41
SAMM50-206ENST00000494795 SUSD4Q5VX71 490 aa12.5□□□□□ -0.41
SAMM50-206ENST00000494795 SEC31BQ9NQW1 1179 aa12.5□□□□□ -0.41
SAMM50-206ENST00000494795 PDRG1Q9NUG6 133 aa12.5□□□□□ -0.41
SAMM50-206ENST00000494795 SPATA31A5Q5VU36 1347 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms