RNA–Protein interactions for RNA: ENST00000494785.5

MKLN1-209, Transcript of muskelin 1, humanhuman

TSL 1 (best)

Gene MKLN1, Length 2,386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKLN1-209ENST00000494785 CCDC57Q2TAC2 916 aa13.83□□□□□ -0.19
MKLN1-209ENST00000494785 PRR5LQ6MZQ0 368 aa13.83□□□□□ -0.19
MKLN1-209ENST00000494785 MMP10P09238 476 aa13.83□□□□□ -0.2
MKLN1-209ENST00000494785 ST5P78524 1137 aa13.83□□□□□ -0.2
MKLN1-209ENST00000494785 IFIT5Q13325 482 aaKnown RBP13.83□□□□□ -0.2
MKLN1-209ENST00000494785 SF3B3Q15393 1217 aaKnown RBP13.83□□□□□ -0.2
MKLN1-209ENST00000494785 FAM161AQ3B820 660 aa13.83□□□□□ -0.2
MKLN1-209ENST00000494785 CCDC152Q4G0S7 254 aa13.83□□□□□ -0.2
MKLN1-209ENST00000494785 RAB11FIP3O75154 756 aa13.82□□□□□ -0.2
MKLN1-209ENST00000494785 SURF6O75683 361 aaKnown RBP13.82□□□□□ -0.2
MKLN1-209ENST00000494785 PTPN12Q05209 780 aaKnown RBP13.82□□□□□ -0.2
MKLN1-209ENST00000494785 NLRP3Q96P20 1036 aa13.82□□□□□ -0.2
MKLN1-209ENST00000494785 EXOC6BQ9Y2D4 811 aa13.82□□□□□ -0.2
MKLN1-209ENST00000494785 PARP3Q9Y6F1 533 aa13.82□□□□□ -0.2
MKLN1-209ENST00000494785 NUCB1Q02818 461 aa13.82□□□□□ -0.2
MKLN1-209ENST00000494785 GREM2Q9H772 168 aa13.82□□□□□ -0.2
MKLN1-209ENST00000494785 CASZ1Q86V15 1759 aa13.82□□□□□ -0.2
MKLN1-209ENST00000494785 ITGA6P23229 1130 aa13.81□□□□□ -0.2
MKLN1-209ENST00000494785 MSL1Q68DK7 614 aa13.81□□□□□ -0.2
MKLN1-209ENST00000494785 FBXO3Q9UK99 471 aa13.81□□□□□ -0.2
MKLN1-209ENST00000494785 ERC1Q8IUD2 1116 aa13.81□□□□□ -0.2
MKLN1-209ENST00000494785 PDGFDQ9GZP0 370 aaPredicted RBP13.81□□□□□ -0.2
MKLN1-209ENST00000494785 PA2G4Q9UQ80 394 aaKnown RBP13.81□□□□□ -0.2
MKLN1-209ENST00000494785 ANKRD18BA2A2Z9 1011 aa13.8□□□□□ -0.2
MKLN1-209ENST00000494785 ANKRD45Q5TZF3 282 aa13.8□□□□□ -0.2
MKLN1-209ENST00000494785 ZBTB47Q9UFB7 747 aaPredicted RBP13.8□□□□□ -0.2
MKLN1-209ENST00000494785 PDZRN3Q9UPQ7 1066 aa13.8□□□□□ -0.2
MKLN1-209ENST00000494785 G3BP1Q13283 466 aaKnown RBP eCLIP13.8□□□□□ -0.2
MKLN1-209ENST00000494785 CHD1LQ86WJ1 897 aa13.8□□□□□ -0.2
MKLN1-209ENST00000494785 KIF1BPQ96EK5 621 aa13.8□□□□□ -0.2
MKLN1-209ENST00000494785 CCDC85AQ96PX6 553 aaPredicted RBP13.8□□□□□ -0.2
MKLN1-209ENST00000494785 LRRCC1Q9C099 1032 aa13.8□□□□□ -0.2
MKLN1-209ENST00000494785 TNRC6CQ9HCJ0 1690 aaKnown RBP13.8□□□□□ -0.2
MKLN1-209ENST00000494785 CIAO1O76071 339 aa13.79□□□□□ -0.2
MKLN1-209ENST00000494785 OS9Q13438 667 aaPredicted RBP13.79□□□□□ -0.2
MKLN1-209ENST00000494785 KLHDC4Q8TBB5 520 aa13.79□□□□□ -0.2
MKLN1-209ENST00000494785 LRP5O75197 1615 aa13.79□□□□□ -0.2
MKLN1-209ENST00000494785 R3HDM1Q15032 1099 aaKnown RBP13.79□□□□□ -0.2
MKLN1-209ENST00000494785 CRY2Q49AN0 593 aa13.79□□□□□ -0.2
MKLN1-209ENST00000494785 TAF7LQ5H9L4 462 aa13.79□□□□□ -0.2
MKLN1-209ENST00000494785 C3orf67Q6ZVT6 689 aa13.79□□□□□ -0.2
MKLN1-209ENST00000494785 BRIP1Q9BX63 1249 aa13.79□□□□□ -0.2
MKLN1-209ENST00000494785 KLRG2A4D1S0 409 aaPredicted RBP13.78□□□□□ -0.2
MKLN1-209ENST00000494785 CCDC24Q8N4L8 307 aa13.78□□□□□ -0.2
MKLN1-209ENST00000494785 RHPN1Q8TCX5 695 aa13.78□□□□□ -0.2
MKLN1-209ENST00000494785 CDC5LQ99459 802 aaKnown RBP13.78□□□□□ -0.2
MKLN1-209ENST00000494785 MTFR1LQ9H019 292 aa13.78□□□□□ -0.2
MKLN1-209ENST00000494785 SIL1Q9H173 461 aa13.78□□□□□ -0.2
MKLN1-209ENST00000494785 EYA2O00167 538 aa13.78□□□□□ -0.2
MKLN1-209ENST00000494785 IL15P40933 162 aaPredicted RBP13.78□□□□□ -0.2
MKLN1-209ENST00000494785 LNPKQ9C0E8 428 aa13.77□□□□□ -0.21
MKLN1-209ENST00000494785 ANKRD31Q8N7Z5 1873 aa13.77□□□□□ -0.21
MKLN1-209ENST00000494785 APBB1O00213 710 aa13.76□□□□□ -0.21
MKLN1-209ENST00000494785 ZNF594Q96JF6 807 aaPredicted RBP13.76□□□□□ -0.21
MKLN1-209ENST00000494785 LDHAL6AQ6ZMR3 332 aa13.76□□□□□ -0.21
MKLN1-209ENST00000494785 ATG9AQ7Z3C6 839 aa13.76□□□□□ -0.21
MKLN1-209ENST00000494785 SEC31BQ9NQW1 1179 aa13.76□□□□□ -0.21
MKLN1-209ENST00000494785 SASH1O94885 1247 aa13.75□□□□□ -0.21
MKLN1-209ENST00000494785 PDE6BP35913 854 aa13.75□□□□□ -0.21
MKLN1-209ENST00000494785 IGHMBP2P38935 993 aaKnown RBP13.75□□□□□ -0.21
MKLN1-209ENST00000494785 DDX46Q7L014 1031 aaKnown RBP13.75□□□□□ -0.21
MKLN1-209ENST00000494785 ANKRD18AQ8IVF6 992 aa13.75□□□□□ -0.21
MKLN1-209ENST00000494785 CLASRPQ8N2M8 674 aaKnown RBP13.75□□□□□ -0.21
MKLN1-209ENST00000494785 RPGRQ92834 1020 aaKnown RBP13.75□□□□□ -0.21
MKLN1-209ENST00000494785 MPHOSPH8Q99549 860 aa13.75□□□□□ -0.21
MKLN1-209ENST00000494785 RIPOR2Q9Y4F9 1068 aa13.75□□□□□ -0.21
MKLN1-209ENST00000494785 LRRC24Q50LG9 513 aa13.74□□□□□ -0.21
MKLN1-209ENST00000494785 CNNM1Q9NRU3 951 aa13.74□□□□□ -0.21
MKLN1-209ENST00000494785 SMARCA5O60264 1052 aaPredicted RBP13.74□□□□□ -0.21
MKLN1-209ENST00000494785 ZBTB7AO95365 584 aa13.74□□□□□ -0.21
MKLN1-209ENST00000494785 HOXA10P31260 410 aaPredicted RBP13.74□□□□□ -0.21
MKLN1-209ENST00000494785 PUS3Q9BZE2 481 aaKnown RBP13.74□□□□□ -0.21
MKLN1-209ENST00000494785 C10orf71Q711Q0 1435 aa13.73□□□□□ -0.21
MKLN1-209ENST00000494785 PDE4AP27815 886 aa13.73□□□□□ -0.21
MKLN1-209ENST00000494785 POLD1P28340 1107 aa13.73□□□□□ -0.21
MKLN1-209ENST00000494785 IL1RAPL2Q9NP60 686 aa13.73□□□□□ -0.21
MKLN1-209ENST00000494785 GPR108Q9NPR9 543 aa13.73□□□□□ -0.21
MKLN1-209ENST00000494785 BSDC1Q9NW68 430 aaPredicted RBP13.73□□□□□ -0.21
MKLN1-209ENST00000494785 MROH5Q6ZUA9 1318 aa13.73□□□□□ -0.21
MKLN1-209ENST00000494785 RPS8P62241 208 aaKnown RBP13.73□□□□□ -0.21
MKLN1-209ENST00000494785 GRAPQ13588 217 aa13.73□□□□□ -0.21
MKLN1-209ENST00000494785 GRAPLQ8TC17 118 aaPredicted RBP13.73□□□□□ -0.21
MKLN1-209ENST00000494785 RBM17Q96I25 401 aaKnown RBP13.73□□□□□ -0.21
MKLN1-209ENST00000494785 CEP126Q9P2H0 1117 aa13.73□□□□□ -0.21
MKLN1-209ENST00000494785 SPEF2Q9C093 1822 aa13.73□□□□□ -0.21
MKLN1-209ENST00000494785 TAF1P21675 1872 aa13.73□□□□□ -0.21
MKLN1-209ENST00000494785 PSDA5PKW4 1024 aaPredicted RBP13.72□□□□□ -0.21
MKLN1-209ENST00000494785 SRGNP10124 158 aa13.72□□□□□ -0.21
MKLN1-209ENST00000494785 TFCP2Q12800 502 aa13.72□□□□□ -0.21
MKLN1-209ENST00000494785 CELF1Q92879 486 aaKnown RBP13.72□□□□□ -0.21
MKLN1-209ENST00000494785 CRAMP1Q96RY5 1269 aa13.72□□□□□ -0.21
MKLN1-209ENST00000494785 COL4A1P02462 1669 aa13.72□□□□□ -0.21
MKLN1-209ENST00000494785 NPR1P16066 1061 aa13.72□□□□□ -0.21
MKLN1-209ENST00000494785 RGS3P49796 1198 aa13.72□□□□□ -0.21
MKLN1-209ENST00000494785 SKAP1Q86WV1 359 aa13.72□□□□□ -0.21
MKLN1-209ENST00000494785 KIF13BQ9NQT8 1826 aa13.71□□□□□ -0.21
MKLN1-209ENST00000494785 METTL24Q5JXM2 366 aa13.71□□□□□ -0.21
MKLN1-209ENST00000494785 AKAP2Q9Y2D5 859 aa13.71□□□□□ -0.21
MKLN1-209ENST00000494785 COL11A2P13942 1736 aaPredicted RBP13.71□□□□□ -0.21
MKLN1-209ENST00000494785 TNNI3KQ59H18 835 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms