RNA–Protein interactions for RNA: ENST00000494504.5

KATNA1-208, Transcript of katanin catalytic subunit A1, human

TSL 5

Gene KATNA1, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KATNA1-208	ENST00000494504	ATG3	Q9NT62	314 aa		10.09	□□□□□ -0.79
KATNA1-208	ENST00000494504	RASSF10	A6NK89	507 aa		10.08	□□□□□ -0.8
KATNA1-208	ENST00000494504	NR1I2	O75469	434 aa		10.08	□□□□□ -0.8
KATNA1-208	ENST00000494504	DGKZ	Q13574	1117 aa		10.08	□□□□□ -0.8
KATNA1-208	ENST00000494504	PRPF38B	Q5VTL8	546 aa	Known RBP	10.08	□□□□□ -0.8
KATNA1-208	ENST00000494504	LDHD	Q86WU2	507 aa		10.08	□□□□□ -0.8
KATNA1-208	ENST00000494504	SLC4A9	Q96Q91	983 aa		10.08	□□□□□ -0.8
KATNA1-208	ENST00000494504	CD163L1	Q9NR16	1453 aa		10.08	□□□□□ -0.8
KATNA1-208	ENST00000494504	PPEF1	O14829	653 aa	Predicted RBP	10.07	□□□□□ -0.8
KATNA1-208	ENST00000494504	RPS6KA4	O75676	772 aa		10.07	□□□□□ -0.8
KATNA1-208	ENST00000494504	DGAT1	O75907	488 aa		10.07	□□□□□ -0.8
KATNA1-208	ENST00000494504	ADH1B	P00325	375 aa		10.07	□□□□□ -0.8
KATNA1-208	ENST00000494504	PRR20E	P86478	221 aa		10.07	□□□□□ -0.8
KATNA1-208	ENST00000494504	PRR20C	P86479	221 aa		10.07	□□□□□ -0.8
KATNA1-208	ENST00000494504	PRR20D	P86480	221 aa		10.07	□□□□□ -0.8
KATNA1-208	ENST00000494504	PRR20B	P86481	221 aa		10.07	□□□□□ -0.8
KATNA1-208	ENST00000494504	PRR20A	P86496	221 aa		10.07	□□□□□ -0.8
KATNA1-208	ENST00000494504	TTLL6	Q8N841	843 aa		10.07	□□□□□ -0.8
KATNA1-208	ENST00000494504	COG3	Q96JB2	828 aa		10.07	□□□□□ -0.8
KATNA1-208	ENST00000494504	MAP2	P11137	1827 aa	Known RBP	10.06	□□□□□ -0.8
KATNA1-208	ENST00000494504	ITGB4	P16144	1822 aa		10.06	□□□□□ -0.8
KATNA1-208	ENST00000494504	VIRMA	Q69YN4	1812 aa	Known RBP	10.06	□□□□□ -0.8
KATNA1-208	ENST00000494504	POLRMT	O00411	1230 aa	Known RBP	10.06	□□□□□ -0.8
KATNA1-208	ENST00000494504	ZNF697	Q5TEC3	545 aa		10.06	□□□□□ -0.8
KATNA1-208	ENST00000494504	MAP1S	Q66K74	1059 aa	Predicted RBP	10.06	□□□□□ -0.8
KATNA1-208	ENST00000494504	CYP4F22	Q6NT55	531 aa		10.06	□□□□□ -0.8
KATNA1-208	ENST00000494504	GPR101	Q96P66	508 aa	Predicted RBP	10.06	□□□□□ -0.8
KATNA1-208	ENST00000494504	TAF1D	Q9H5J8	278 aa	Predicted RBP	10.06	□□□□□ -0.8
KATNA1-208	ENST00000494504	MON2	Q7Z3U7	1717 aa		10.05	□□□□□ -0.8
KATNA1-208	ENST00000494504	TIAM2	Q8IVF5	1701 aa		10.05	□□□□□ -0.8
KATNA1-208	ENST00000494504	RC3H1	Q5TC82	1133 aa	Known RBP	10.05	□□□□□ -0.8
KATNA1-208	ENST00000494504	LIAT1	Q6ZQX7	453 aa		10.05	□□□□□ -0.8
KATNA1-208	ENST00000494504	C2CD5	Q86YS7	1000 aa		10.05	□□□□□ -0.8
KATNA1-208	ENST00000494504	ZNF775	Q96BV0	537 aa	Predicted RBP	10.05	□□□□□ -0.8
KATNA1-208	ENST00000494504	CAPNS2	Q96L46	248 aa		10.05	□□□□□ -0.8
KATNA1-208	ENST00000494504	RAB3GAP2	Q9H2M9	1393 aa		10.04	□□□□□ -0.8
KATNA1-208	ENST00000494504	IQCA1L	A6NCM1	817 aa		10.04	□□□□□ -0.8
KATNA1-208	ENST00000494504	C21orf2	O43822	256 aa		10.04	□□□□□ -0.8
KATNA1-208	ENST00000494504	AOC2	O75106	756 aa		10.04	□□□□□ -0.8
KATNA1-208	ENST00000494504	FMR1	Q06787	632 aa	Known RBP eCLIP	10.04	□□□□□ -0.8
KATNA1-208	ENST00000494504	HSP90AB2P	Q58FF8	381 aa		10.04	□□□□□ -0.8
KATNA1-208	ENST00000494504	CNTROB	Q8N137	903 aa		10.04	□□□□□ -0.8
KATNA1-208	ENST00000494504	SLC6A16	Q9GZN6	736 aa		10.04	□□□□□ -0.8
KATNA1-208	ENST00000494504	EDC4	Q6P2E9	1401 aa	Known RBP	10.04	□□□□□ -0.8
KATNA1-208	ENST00000494504	TULP1	O00294	542 aa	Predicted RBP	10.03	□□□□□ -0.8
KATNA1-208	ENST00000494504	OAT	P04181	439 aa		10.03	□□□□□ -0.8
KATNA1-208	ENST00000494504	SLC10A3	P09131	477 aa		10.03	□□□□□ -0.8
KATNA1-208	ENST00000494504	CCDC88A	Q3V6T2	1871 aa		10.03	□□□□□ -0.8
KATNA1-208	ENST00000494504	SMG6	Q86US8	1419 aa	Known RBP	10.03	□□□□□ -0.8
KATNA1-208	ENST00000494504	ZNF622	Q969S3	477 aa	Known RBP eCLIP	10.03	□□□□□ -0.8
KATNA1-208	ENST00000494504	TERF2IP	Q9NYB0	399 aa		10.03	□□□□□ -0.8
KATNA1-208	ENST00000494504	SPG7	Q9UQ90	795 aa		10.03	□□□□□ -0.8
KATNA1-208	ENST00000494504	CNTNAP4	Q9C0A0	1308 aa		10.03	□□□□□ -0.8
KATNA1-208	ENST00000494504	USP42	Q9H9J4	1324 aa	Known RBP	10.03	□□□□□ -0.8
KATNA1-208	ENST00000494504		A0A1W2PP64	1363 aa		10.02	□□□□□ -0.8
KATNA1-208	ENST00000494504	FAM187A	A6NFU0	413 aa		10.02	□□□□□ -0.81
KATNA1-208	ENST00000494504		H0YIN7	160 aa		10.02	□□□□□ -0.81
KATNA1-208	ENST00000494504	TM4SF1	P30408	202 aa		10.02	□□□□□ -0.81
KATNA1-208	ENST00000494504	TNFRSF10A	O00220	468 aa		10.01	□□□□□ -0.81
KATNA1-208	ENST00000494504	PTCD1	O75127	700 aa	Known RBP	10.01	□□□□□ -0.81
KATNA1-208	ENST00000494504	ECE1	P42892	770 aa		10.01	□□□□□ -0.81
KATNA1-208	ENST00000494504	CRKL	P46109	303 aa	Known RBP	10.01	□□□□□ -0.81
KATNA1-208	ENST00000494504	USPL1	Q5W0Q7	1092 aa		10.01	□□□□□ -0.81
KATNA1-208	ENST00000494504	CASP8AP2	Q9UKL3	1982 aa		10.01	□□□□□ -0.81
KATNA1-208	ENST00000494504	KDR	P35968	1356 aa		10.01	□□□□□ -0.81
KATNA1-208	ENST00000494504	EPHX2	P34913	555 aa		10	□□□□□ -0.81
KATNA1-208	ENST00000494504	NFIX	Q14938	502 aa		10	□□□□□ -0.81
KATNA1-208	ENST00000494504	CCDC24	Q8N4L8	307 aa		10	□□□□□ -0.81
KATNA1-208	ENST00000494504	PXYLP1	Q8TE99	480 aa		10	□□□□□ -0.81
KATNA1-208	ENST00000494504	TAOK3	Q9H2K8	898 aa		10	□□□□□ -0.81
KATNA1-208	ENST00000494504	DDX21	Q9NR30	783 aa	Known RBP eCLIP	10	□□□□□ -0.81
KATNA1-208	ENST00000494504	HACL1	Q9UJ83	578 aa		10	□□□□□ -0.81
KATNA1-208	ENST00000494504	GDF9	O60383	454 aa		9.99	□□□□□ -0.81
KATNA1-208	ENST00000494504	SERPINB2	P05120	415 aa		9.99	□□□□□ -0.81
KATNA1-208	ENST00000494504	PHKG2	P15735	406 aa		9.99	□□□□□ -0.81
KATNA1-208	ENST00000494504	SMYD5	Q6GMV2	418 aa		9.99	□□□□□ -0.81
KATNA1-208	ENST00000494504	SCUBE3	Q8IX30	993 aa		9.99	□□□□□ -0.81
KATNA1-208	ENST00000494504	RTL1	A6NKG5	1358 aa		9.99	□□□□□ -0.81
KATNA1-208	ENST00000494504	BICDL1	Q6ZP65	573 aa		9.98	□□□□□ -0.81
KATNA1-208	ENST00000494504	IFNL2	Q8IZJ0	200 aa		9.98	□□□□□ -0.81
KATNA1-208	ENST00000494504	GGNBP2	Q9H3C7	697 aa		9.98	□□□□□ -0.81
KATNA1-208	ENST00000494504	RNF123	Q5XPI4	1314 aa		9.98	□□□□□ -0.81
KATNA1-208	ENST00000494504	CARMIL3	Q8ND23	1372 aa		9.98	□□□□□ -0.81
KATNA1-208	ENST00000494504	TRAF5	O00463	557 aa		9.97	□□□□□ -0.81
KATNA1-208	ENST00000494504	HABP4	Q5JVS0	413 aa	Known RBP	9.97	□□□□□ -0.81
KATNA1-208	ENST00000494504	SPSB2	Q99619	263 aa		9.97	□□□□□ -0.81
KATNA1-208	ENST00000494504	ZNF541	Q9H0D2	1346 aa		9.97	□□□□□ -0.81
KATNA1-208	ENST00000494504	ROCK2	O75116	1388 aa	Known RBP	9.97	□□□□□ -0.81
KATNA1-208	ENST00000494504	MYH14	Q7Z406	1995 aa	Known RBP	9.96	□□□□□ -0.81
KATNA1-208	ENST00000494504	SEMA3E	O15041	775 aa		9.96	□□□□□ -0.82
KATNA1-208	ENST00000494504	PPM1G	O15355	546 aa	Predicted RBP	9.96	□□□□□ -0.82
KATNA1-208	ENST00000494504	CA12	O43570	354 aa		9.96	□□□□□ -0.82
KATNA1-208	ENST00000494504	MAP2K2	P36507	400 aa		9.96	□□□□□ -0.82
KATNA1-208	ENST00000494504	HIC1	Q14526	733 aa		9.96	□□□□□ -0.82
KATNA1-208	ENST00000494504	PUS10	Q3MIT2	529 aa	Known RBP	9.96	□□□□□ -0.82
KATNA1-208	ENST00000494504	PLA2G2C	Q5R387	149 aa		9.96	□□□□□ -0.82
KATNA1-208	ENST00000494504	CIAPIN1	Q6FI81	312 aa		9.96	□□□□□ -0.82
KATNA1-208	ENST00000494504	PNMA8A	Q86V59	439 aa	Predicted RBP	9.96	□□□□□ -0.82
KATNA1-208	ENST00000494504	INSR	P06213	1382 aa		9.96	□□□□□ -0.82
KATNA1-208	ENST00000494504	CABP4	P57796	275 aa		9.95	□□□□□ -0.82

Retrieved 100 of 20,778 RNA–protein pairs in 17 ms