RNA–Protein interactions for RNA: ENST00000493991.5

COL2A1-208, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 3,756 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-208ENST00000493991 NCOA5Q9HCD5 579 aaKnown RBP13□□□□□ -0.33
COL2A1-208ENST00000493991 CD163L1Q9NR16 1453 aa13□□□□□ -0.33
COL2A1-208ENST00000493991 SYT1P21579 422 aa13□□□□□ -0.33
COL2A1-208ENST00000493991 TNMDQ9H2S6 317 aa13□□□□□ -0.33
COL2A1-208ENST00000493991 A0A1B0GUL7 405 aa13□□□□□ -0.33
COL2A1-208ENST00000493991 GADD45BO75293 160 aaPredicted RBP13□□□□□ -0.33
COL2A1-208ENST00000493991 BRPF1P55201 1214 aaPredicted RBP13□□□□□ -0.33
COL2A1-208ENST00000493991 Q6ZUG5 572 aa13□□□□□ -0.33
COL2A1-208ENST00000493991 TRERF1Q96PN7 1200 aa13□□□□□ -0.33
COL2A1-208ENST00000493991 MYO3AQ8NEV4 1616 aa13□□□□□ -0.33
COL2A1-208ENST00000493991 ANKRD18BA2A2Z9 1011 aa12.99□□□□□ -0.33
COL2A1-208ENST00000493991 RIMBP3CA6NJZ7 1639 aa12.99□□□□□ -0.33
COL2A1-208ENST00000493991 RIMBP3BA6NNM3 1639 aa12.99□□□□□ -0.33
COL2A1-208ENST00000493991 RIMBP3Q9UFD9 1639 aa12.99□□□□□ -0.33
COL2A1-208ENST00000493991 ERICH2A1L162 156 aa12.99□□□□□ -0.33
COL2A1-208ENST00000493991 APOBRQ0VD83 1088 aa12.99□□□□□ -0.33
COL2A1-208ENST00000493991 KLHL40Q2TBA0 621 aa12.99□□□□□ -0.33
COL2A1-208ENST00000493991 TNNI3KQ59H18 835 aa12.99□□□□□ -0.33
COL2A1-208ENST00000493991 OTUD7BQ6GQQ9 843 aa12.99□□□□□ -0.33
COL2A1-208ENST00000493991 PI16Q6UXB8 463 aa12.99□□□□□ -0.33
COL2A1-208ENST00000493991 FPGT-TNNI3KV9GXZ4 949 aa12.99□□□□□ -0.33
COL2A1-208ENST00000493991 ATP2B3Q16720 1220 aa12.99□□□□□ -0.33
COL2A1-208ENST00000493991 SLC9C2Q5TAH2 1124 aa12.99□□□□□ -0.33
COL2A1-208ENST00000493991 DZIP3Q86Y13 1208 aaKnown RBP12.99□□□□□ -0.33
COL2A1-208ENST00000493991 MIGA1Q8NAN2 632 aa12.99□□□□□ -0.33
COL2A1-208ENST00000493991 SETBP1Q9Y6X0 1596 aa12.98□□□□□ -0.33
COL2A1-208ENST00000493991 DDB1Q16531 1140 aa12.98□□□□□ -0.33
COL2A1-208ENST00000493991 IMMTQ16891 758 aaKnown RBP12.98□□□□□ -0.33
COL2A1-208ENST00000493991 SMIM5Q71RC9 77 aa12.98□□□□□ -0.33
COL2A1-208ENST00000493991 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.98□□□□□ -0.33
COL2A1-208ENST00000493991 PAG1Q9NWQ8 432 aa12.98□□□□□ -0.33
COL2A1-208ENST00000493991 ZNF219Q9P2Y4 722 aaPredicted RBP12.98□□□□□ -0.33
COL2A1-208ENST00000493991 CCDC171Q6TFL3 1326 aa12.98□□□□□ -0.33
COL2A1-208ENST00000493991 TTLL5Q6EMB2 1281 aa12.98□□□□□ -0.33
COL2A1-208ENST00000493991 NIP7Q9Y221 180 aaKnown RBP eCLIP12.98□□□□□ -0.33
COL2A1-208ENST00000493991 U3KPZ7 1027 aaPredicted RBP12.98□□□□□ -0.33
COL2A1-208ENST00000493991 IRS4O14654 1257 aaPredicted RBP12.98□□□□□ -0.33
COL2A1-208ENST00000493991 KINO60870 393 aaKnown RBP12.98□□□□□ -0.33
COL2A1-208ENST00000493991 IGHMBP2P38935 993 aaKnown RBP12.98□□□□□ -0.33
COL2A1-208ENST00000493991 VWDEQ8N2E2 1590 aa12.98□□□□□ -0.33
COL2A1-208ENST00000493991 IL25Q9H293 177 aa12.98□□□□□ -0.33
COL2A1-208ENST00000493991 IBTKQ9P2D0 1353 aaPredicted RBP12.98□□□□□ -0.33
COL2A1-208ENST00000493991 GOLGA8BA8MQT2 603 aa12.97□□□□□ -0.33
COL2A1-208ENST00000493991 BIN1O00499 593 aa12.97□□□□□ -0.33
COL2A1-208ENST00000493991 IGKV5-2P06315 115 aa12.97□□□□□ -0.33
COL2A1-208ENST00000493991 ANKRD1Q15327 319 aa12.97□□□□□ -0.33
COL2A1-208ENST00000493991 ZSCAN31Q96LW9 406 aaPredicted RBP12.97□□□□□ -0.33
COL2A1-208ENST00000493991 ZNF213O14771 459 aa12.97□□□□□ -0.33
COL2A1-208ENST00000493991 NSFL1CQ9UNZ2 370 aaKnown RBP12.97□□□□□ -0.33
COL2A1-208ENST00000493991 NPHP4O75161 1426 aaPredicted RBP12.97□□□□□ -0.33
COL2A1-208ENST00000493991 JAK2O60674 1132 aa12.97□□□□□ -0.33
COL2A1-208ENST00000493991 SASH1O94885 1247 aa12.97□□□□□ -0.33
COL2A1-208ENST00000493991 ZSCAN22P10073 491 aaPredicted RBP12.97□□□□□ -0.33
COL2A1-208ENST00000493991 FILIP1Q7Z7B0 1213 aa12.97□□□□□ -0.33
COL2A1-208ENST00000493991 PLBD2Q8NHP8 589 aa12.96□□□□□ -0.33
COL2A1-208ENST00000493991 NAPBQ9H115 298 aa12.96□□□□□ -0.33
COL2A1-208ENST00000493991 DBNLQ9UJU6 430 aaKnown RBP12.96□□□□□ -0.33
COL2A1-208ENST00000493991 MCMDC2Q4G0Z9 681 aa12.96□□□□□ -0.33
COL2A1-208ENST00000493991 ZNF589Q86UQ0 364 aaPredicted RBP12.96□□□□□ -0.33
COL2A1-208ENST00000493991 KIF2CQ99661 725 aa12.96□□□□□ -0.33
COL2A1-208ENST00000493991 UBAP1LF5GYI3 381 aa12.96□□□□□ -0.34
COL2A1-208ENST00000493991 KLHL34Q8N239 644 aa12.96□□□□□ -0.34
COL2A1-208ENST00000493991 ZKSCAN3Q9BRR0 538 aa12.96□□□□□ -0.34
COL2A1-208ENST00000493991 NUP62CLQ9H1M0 184 aa12.96□□□□□ -0.34
COL2A1-208ENST00000493991 GOLGA6L6A8MZA4 724 aa12.95□□□□□ -0.34
COL2A1-208ENST00000493991 TNNT3P45378 269 aaPredicted RBP12.95□□□□□ -0.34
COL2A1-208ENST00000493991 KRT32Q14532 448 aa12.95□□□□□ -0.34
COL2A1-208ENST00000493991 AKAP2Q9Y2D5 859 aa12.95□□□□□ -0.34
COL2A1-208ENST00000493991 SLC27A2O14975 620 aa12.95□□□□□ -0.34
COL2A1-208ENST00000493991 IL15P40933 162 aaPredicted RBP12.95□□□□□ -0.34
COL2A1-208ENST00000493991 ATP2B2Q01814 1243 aa12.95□□□□□ -0.34
COL2A1-208ENST00000493991 VPS53Q5VIR6 699 aa12.95□□□□□ -0.34
COL2A1-208ENST00000493991 CCAR2Q8N163 923 aaKnown RBP12.95□□□□□ -0.34
COL2A1-208ENST00000493991 ERCC4Q92889 916 aaPredicted RBP12.95□□□□□ -0.34
COL2A1-208ENST00000493991 TTC41PQ6P2S7 1318 aa12.95□□□□□ -0.34
COL2A1-208ENST00000493991 LAMC1P11047 1609 aa12.95□□□□□ -0.34
COL2A1-208ENST00000493991 PTCH1Q13635 1447 aa12.95□□□□□ -0.34
COL2A1-208ENST00000493991 FSD2A1L4K1 749 aa12.95□□□□□ -0.34
COL2A1-208ENST00000493991 HOXB7P09629 217 aa12.95□□□□□ -0.34
COL2A1-208ENST00000493991 FAM98CQ17RN3 349 aaKnown RBP12.95□□□□□ -0.34
COL2A1-208ENST00000493991 BRINP3Q76B58 766 aa12.95□□□□□ -0.34
COL2A1-208ENST00000493991 RAD50Q92878 1312 aa12.94□□□□□ -0.34
COL2A1-208ENST00000493991 PCDH11XQ9BZA7 1347 aa12.94□□□□□ -0.34
COL2A1-208ENST00000493991 PCDH11YQ9BZA8 1340 aa12.94□□□□□ -0.34
COL2A1-208ENST00000493991 KLF18A0A0U1RQI7 1052 aa12.94□□□□□ -0.34
COL2A1-208ENST00000493991 RANBP6O60518 1105 aaKnown RBP12.94□□□□□ -0.34
COL2A1-208ENST00000493991 ITGA6P23229 1130 aa12.94□□□□□ -0.34
COL2A1-208ENST00000493991 HSP90AA4PQ58FG1 418 aa12.94□□□□□ -0.34
COL2A1-208ENST00000493991 IQSEC2Q5JU85 1478 aa12.94□□□□□ -0.34
COL2A1-208ENST00000493991 ADORA1P30542 326 aa12.94□□□□□ -0.34
COL2A1-208ENST00000493991 EYA2O00167 538 aa12.94□□□□□ -0.34
COL2A1-208ENST00000493991 LARGE1O95461 756 aa12.94□□□□□ -0.34
COL2A1-208ENST00000493991 HSPA4P34932 840 aa12.94□□□□□ -0.34
COL2A1-208ENST00000493991 ANAPC15P60006 121 aa12.94□□□□□ -0.34
COL2A1-208ENST00000493991 SH2B1Q9NRF2 756 aaPredicted RBP12.94□□□□□ -0.34
COL2A1-208ENST00000493991 SAFBQ15424 915 aaKnown RBP eCLIP12.93□□□□□ -0.34
COL2A1-208ENST00000493991 ME3Q16798 604 aa12.93□□□□□ -0.34
COL2A1-208ENST00000493991 TMEM63CQ9P1W3 806 aa12.93□□□□□ -0.34
COL2A1-208ENST00000493991 CCDC69A6NI79 296 aa12.93□□□□□ -0.34
COL2A1-208ENST00000493991 CCDC192P0DO97 292 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms