RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 C4AP0C0L4 1744 aa15.57■□□□□ 0.08
SNX17-208ENST00000493711 ARFGEF2Q9Y6D5 1785 aa15.57■□□□□ 0.08
SNX17-208ENST00000493711 FAM177BA6PVY3 158 aa15.56■□□□□ 0.08
SNX17-208ENST00000493711 PDE8AO60658 829 aa15.56■□□□□ 0.08
SNX17-208ENST00000493711 CASP7P55210 303 aa15.56■□□□□ 0.08
SNX17-208ENST00000493711 PDGFDQ9GZP0 370 aaPredicted RBP15.56■□□□□ 0.08
SNX17-208ENST00000493711 PDZRN3Q9UPQ7 1066 aa15.56■□□□□ 0.08
SNX17-208ENST00000493711 RIC1Q4ADV7 1423 aa15.55■□□□□ 0.08
SNX17-208ENST00000493711 ZBTB7AO95365 584 aa15.55■□□□□ 0.08
SNX17-208ENST00000493711 PRR5LQ6MZQ0 368 aa15.55■□□□□ 0.08
SNX17-208ENST00000493711 EXOC6Q8TAG9 804 aa15.55■□□□□ 0.08
SNX17-208ENST00000493711 ERFEQ4G0M1 354 aa15.54■□□□□ 0.08
SNX17-208ENST00000493711 RPAP2Q8IXW5 612 aaPredicted RBP15.54■□□□□ 0.08
SNX17-208ENST00000493711 NLRP3Q96P20 1036 aa15.54■□□□□ 0.08
SNX17-208ENST00000493711 BRIP1Q9BX63 1249 aa15.54■□□□□ 0.08
SNX17-208ENST00000493711 TUBGCP6Q96RT7 1819 aa15.53■□□□□ 0.08
SNX17-208ENST00000493711 PDE6BP35913 854 aa15.53■□□□□ 0.08
SNX17-208ENST00000493711 IRX6P78412 446 aaPredicted RBP15.53■□□□□ 0.08
SNX17-208ENST00000493711 NUTM1Q86Y26 1132 aa15.53■□□□□ 0.08
SNX17-208ENST00000493711 LRRFIP2Q9Y608 721 aaKnown RBP15.53■□□□□ 0.08
SNX17-208ENST00000493711 CEP350Q5VT06 3117 aa15.52■□□□□ 0.08
SNX17-208ENST00000493711 HMMRO75330 724 aa15.52■□□□□ 0.08
SNX17-208ENST00000493711 CTSWP56202 376 aa15.52■□□□□ 0.08
SNX17-208ENST00000493711 MTX1Q13505 466 aa15.52■□□□□ 0.08
SNX17-208ENST00000493711 SF3B3Q15393 1217 aaKnown RBP15.52■□□□□ 0.08
SNX17-208ENST00000493711 RABL6Q3YEC7 729 aaPredicted RBP15.52■□□□□ 0.08
SNX17-208ENST00000493711 CCDC152Q4G0S7 254 aa15.52■□□□□ 0.08
SNX17-208ENST00000493711 RTL5Q5HYW3 569 aaPredicted RBP15.52■□□□□ 0.08
SNX17-208ENST00000493711 SUCLG2Q96I99 432 aa15.52■□□□□ 0.08
SNX17-208ENST00000493711 CSF1RP07333 972 aa15.51■□□□□ 0.07
SNX17-208ENST00000493711 HCLS1P14317 486 aaPredicted RBP15.51■□□□□ 0.07
SNX17-208ENST00000493711 BICC1Q9H694 974 aaKnown RBP15.51■□□□□ 0.07
SNX17-208ENST00000493711 CASZ1Q86V15 1759 aa15.51■□□□□ 0.07
SNX17-208ENST00000493711 NUP98P52948 1817 aa15.5■□□□□ 0.07
SNX17-208ENST00000493711 ANKRD36CQ5JPF3 1778 aa15.5■□□□□ 0.07
SNX17-208ENST00000493711 N4BP2Q86UW6 1770 aaPredicted RBP15.5■□□□□ 0.07
SNX17-208ENST00000493711 KLRG2A4D1S0 409 aaPredicted RBP15.5■□□□□ 0.07
SNX17-208ENST00000493711 PTGER2P43116 358 aa15.5■□□□□ 0.07
SNX17-208ENST00000493711 FOXO4P98177 505 aa15.5■□□□□ 0.07
SNX17-208ENST00000493711 ATP8B2P98198 1209 aa15.5■□□□□ 0.07
SNX17-208ENST00000493711 LMBR1LQ6UX01 489 aa15.5■□□□□ 0.07
SNX17-208ENST00000493711 JARID2Q92833 1246 aaPredicted RBP15.5■□□□□ 0.07
SNX17-208ENST00000493711 SGIP1Q9BQI5 828 aa15.5■□□□□ 0.07
SNX17-208ENST00000493711 RTL9Q8NET4 1388 aa15.49■□□□□ 0.07
SNX17-208ENST00000493711 COL24A1Q17RW2 1714 aa15.49■□□□□ 0.07
SNX17-208ENST00000493711 CD44P16070 742 aaKnown RBP15.49■□□□□ 0.07
SNX17-208ENST00000493711 MNX1P50219 401 aaPredicted RBP15.49■□□□□ 0.07
SNX17-208ENST00000493711 SYNE4Q8N205 404 aa15.49■□□□□ 0.07
SNX17-208ENST00000493711 ANKRD44Q8N8A2 993 aa15.49■□□□□ 0.07
SNX17-208ENST00000493711 TTLL11Q8NHH1 800 aa15.49■□□□□ 0.07
SNX17-208ENST00000493711 KAZALD1Q96I82 304 aa15.49■□□□□ 0.07
SNX17-208ENST00000493711 SYT17Q9BSW7 474 aa15.49■□□□□ 0.07
SNX17-208ENST00000493711 ABCC12Q96J65 1359 aa15.49■□□□□ 0.07
SNX17-208ENST00000493711 CCDC57Q2TAC2 916 aa15.48■□□□□ 0.07
SNX17-208ENST00000493711 CRY2Q49AN0 593 aa15.48■□□□□ 0.07
SNX17-208ENST00000493711 CEP85Q6P2H3 762 aa15.48■□□□□ 0.07
SNX17-208ENST00000493711 RPGRQ92834 1020 aaKnown RBP15.48■□□□□ 0.07
SNX17-208ENST00000493711 CD2APQ9Y5K6 639 aa15.48■□□□□ 0.07
SNX17-208ENST00000493711 H0YIN7 160 aa15.47■□□□□ 0.07
SNX17-208ENST00000493711 SRGAP3O43295 1099 aa15.47■□□□□ 0.07
SNX17-208ENST00000493711 TGFB2P61812 414 aa15.47■□□□□ 0.07
SNX17-208ENST00000493711 IFIT5Q13325 482 aaKnown RBP15.47■□□□□ 0.07
SNX17-208ENST00000493711 EPHA10Q5JZY3 1008 aa15.47■□□□□ 0.07
SNX17-208ENST00000493711 C10orf71Q711Q0 1435 aa15.47■□□□□ 0.07
SNX17-208ENST00000493711 DDX46Q7L014 1031 aaKnown RBP15.47■□□□□ 0.07
SNX17-208ENST00000493711 RBM17Q96I25 401 aaKnown RBP15.47■□□□□ 0.07
SNX17-208ENST00000493711 CDC5LQ99459 802 aaKnown RBP15.47■□□□□ 0.07
SNX17-208ENST00000493711 FHDC1Q9C0D6 1143 aaPredicted RBP15.47■□□□□ 0.07
SNX17-208ENST00000493711 RWDD1Q9H446 243 aaPredicted RBP15.47■□□□□ 0.07
SNX17-208ENST00000493711 C1orf115Q9H7X2 142 aa15.47■□□□□ 0.07
SNX17-208ENST00000493711 CHMP3Q9Y3E7 222 aa15.47■□□□□ 0.07
SNX17-208ENST00000493711 ANKRD18BA2A2Z9 1011 aa15.46■□□□□ 0.07
SNX17-208ENST00000493711 NPR1P16066 1061 aa15.46■□□□□ 0.07
SNX17-208ENST00000493711 HOXA10P31260 410 aaPredicted RBP15.46■□□□□ 0.07
SNX17-208ENST00000493711 SSH3Q8TE77 659 aa15.46■□□□□ 0.07
SNX17-208ENST00000493711 CRAMP1Q96RY5 1269 aa15.46■□□□□ 0.07
SNX17-208ENST00000493711 FBXO3Q9UK99 471 aa15.46■□□□□ 0.07
SNX17-208ENST00000493711 ALDH1B1P30837 517 aa15.45■□□□□ 0.06
SNX17-208ENST00000493711 HDAC1Q13547 482 aaPredicted RBP15.45■□□□□ 0.06
SNX17-208ENST00000493711 HSP90AB4PQ58FF6 505 aa15.45■□□□□ 0.06
SNX17-208ENST00000493711 TAF7LQ5H9L4 462 aa15.45■□□□□ 0.06
SNX17-208ENST00000493711 STYK1Q6J9G0 422 aa15.45■□□□□ 0.06
SNX17-208ENST00000493711 TMC4Q7Z404 712 aa15.45■□□□□ 0.06
SNX17-208ENST00000493711 MASTLQ96GX5 879 aa15.45■□□□□ 0.06
SNX17-208ENST00000493711 PPP4R2Q9NY27 417 aa15.45■□□□□ 0.06
SNX17-208ENST00000493711 NRXN2Q9P2S2 1712 aa15.44■□□□□ 0.06
SNX17-208ENST00000493711 SRGNP10124 158 aa15.44■□□□□ 0.06
SNX17-208ENST00000493711 ITGA6P23229 1130 aa15.44■□□□□ 0.06
SNX17-208ENST00000493711 C2CD5Q86YS7 1000 aa15.44■□□□□ 0.06
SNX17-208ENST00000493711 CCDC24Q8N4L8 307 aa15.44■□□□□ 0.06
SNX17-208ENST00000493711 GREM2Q9H772 168 aa15.44■□□□□ 0.06
SNX17-208ENST00000493711 PCDHB15Q9Y5E8 787 aa15.44■□□□□ 0.06
SNX17-208ENST00000493711 BBOX1O75936 387 aa15.43■□□□□ 0.06
SNX17-208ENST00000493711 IGHMBP2P38935 993 aaKnown RBP15.43■□□□□ 0.06
SNX17-208ENST00000493711 FAM161AQ3B820 660 aa15.43■□□□□ 0.06
SNX17-208ENST00000493711 ANKRD18AQ8IVF6 992 aa15.43■□□□□ 0.06
SNX17-208ENST00000493711 CNKSR1Q969H4 720 aa15.43■□□□□ 0.06
SNX17-208ENST00000493711 COPRSQ9NQ92 184 aa15.43■□□□□ 0.06
SNX17-208ENST00000493711 AFDNP55196 1824 aaKnown RBP15.43■□□□□ 0.06
SNX17-208ENST00000493711 PNMA6EA0A0J9YXQ4 647 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms