RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 ARID4AP29374 1257 aaPredicted RBP9.39□□□□□ -0.91
SMC4-223ENST00000493695 INPP5BP32019 993 aa9.39□□□□□ -0.91
SMC4-223ENST00000493695 CDCA8Q53HL2 280 aa9.39□□□□□ -0.91
SMC4-223ENST00000493695 MSL1Q68DK7 614 aa9.39□□□□□ -0.91
SMC4-223ENST00000493695 WFDC8Q8IUA0 241 aa9.39□□□□□ -0.91
SMC4-223ENST00000493695 DMGDHQ9UI17 866 aaKnown RBP9.39□□□□□ -0.91
SMC4-223ENST00000493695 USP20Q9Y2K6 914 aa9.39□□□□□ -0.91
SMC4-223ENST00000493695 EIF2AK2P19525 551 aaKnown RBP9.38□□□□□ -0.91
SMC4-223ENST00000493695 PERM1Q5SV97 790 aa9.38□□□□□ -0.91
SMC4-223ENST00000493695 FAM200AQ8TCP9 573 aa9.38□□□□□ -0.91
SMC4-223ENST00000493695 ZFP64Q9NPA5 681 aa9.38□□□□□ -0.91
SMC4-223ENST00000493695 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMC4-223ENST00000493695 ZFATQ9P243 1243 aa9.38□□□□□ -0.91
SMC4-223ENST00000493695 C11orf91Q3C1V1 193 aa9.37□□□□□ -0.91
SMC4-223ENST00000493695 FOXD4L6Q3SYB3 417 aaPredicted RBP9.37□□□□□ -0.91
SMC4-223ENST00000493695 FOXD4L3Q6VB84 417 aaPredicted RBP9.37□□□□□ -0.91
SMC4-223ENST00000493695 CMTR1Q8N1G2 835 aaKnown RBP9.37□□□□□ -0.91
SMC4-223ENST00000493695 QTRT2Q9H974 415 aaKnown RBP9.37□□□□□ -0.91
SMC4-223ENST00000493695 FOXO3O43524 673 aa9.36□□□□□ -0.91
SMC4-223ENST00000493695 TMEM132AQ24JP5 1023 aa9.36□□□□□ -0.91
SMC4-223ENST00000493695 RGL4Q8IZJ4 473 aa9.36□□□□□ -0.91
SMC4-223ENST00000493695 IFT43Q96FT9 208 aa9.36□□□□□ -0.91
SMC4-223ENST00000493695 SMG9Q9H0W8 520 aaKnown RBP9.36□□□□□ -0.91
SMC4-223ENST00000493695 MAP3K6O95382 1288 aa9.35□□□□□ -0.91
SMC4-223ENST00000493695 H2AFB1P0C5Y9 115 aa9.35□□□□□ -0.91
SMC4-223ENST00000493695 H2AFB2P0C5Z0 115 aa9.35□□□□□ -0.91
SMC4-223ENST00000493695 LPIN3Q9BQK8 851 aa9.35□□□□□ -0.91
SMC4-223ENST00000493695 ZBTB42B2RXF5 422 aa9.34□□□□□ -0.91
SMC4-223ENST00000493695 GRNP28799 593 aaKnown RBP9.34□□□□□ -0.91
SMC4-223ENST00000493695 IREB2P48200 963 aaKnown RBP9.34□□□□□ -0.91
SMC4-223ENST00000493695 PLAURQ03405 335 aa9.34□□□□□ -0.91
SMC4-223ENST00000493695 ARTNQ5T4W7 220 aa9.34□□□□□ -0.91
SMC4-223ENST00000493695 RTCBQ9Y3I0 505 aaKnown RBP9.34□□□□□ -0.91
SMC4-223ENST00000493695 XYLBO75191 536 aa9.33□□□□□ -0.92
SMC4-223ENST00000493695 WEE1P30291 646 aa9.33□□□□□ -0.92
SMC4-223ENST00000493695 GDF6Q6KF10 455 aaPredicted RBP9.33□□□□□ -0.92
SMC4-223ENST00000493695 TRPM4Q8TD43 1214 aa9.33□□□□□ -0.92
SMC4-223ENST00000493695 PSMG3-AS1Q96PY0 264 aa9.33□□□□□ -0.92
SMC4-223ENST00000493695 FRRS1LQ9P0K9 344 aa9.33□□□□□ -0.92
SMC4-223ENST00000493695 ZNF777Q9ULD5 760 aaPredicted RBP9.33□□□□□ -0.92
SMC4-223ENST00000493695 GPLD1P80108 840 aa9.32□□□□□ -0.92
SMC4-223ENST00000493695 FBXO11Q86XK2 927 aa9.32□□□□□ -0.92
SMC4-223ENST00000493695 TREML1Q86YW5 311 aa9.32□□□□□ -0.92
SMC4-223ENST00000493695 DTWD1Q8N5C7 304 aa9.32□□□□□ -0.92
SMC4-223ENST00000493695 WFDC12Q8WWY7 111 aa9.32□□□□□ -0.92
SMC4-223ENST00000493695 ARXQ96QS3 562 aa9.32□□□□□ -0.92
SMC4-223ENST00000493695 A6NJR5 290 aa9.31□□□□□ -0.92
SMC4-223ENST00000493695 J3QW42 95 aa9.31□□□□□ -0.92
SMC4-223ENST00000493695 GHRHP01286 108 aa9.31□□□□□ -0.92
SMC4-223ENST00000493695 PSAPP07602 524 aa9.31□□□□□ -0.92
SMC4-223ENST00000493695 PRIMPOLQ96LW4 560 aa9.31□□□□□ -0.92
SMC4-223ENST00000493695 NSUN5Q96P11 429 aaKnown RBP9.31□□□□□ -0.92
SMC4-223ENST00000493695 RBSNQ9H1K0 784 aa9.31□□□□□ -0.92
SMC4-223ENST00000493695 NOVA2Q9UNW9 492 aaKnown RBP9.3□□□□□ -0.92
SMC4-223ENST00000493695 OPLAHO14841 1288 aa9.29□□□□□ -0.92
SMC4-223ENST00000493695 PRMT3O60678 531 aa9.29□□□□□ -0.92
SMC4-223ENST00000493695 GRIK5Q16478 980 aa9.29□□□□□ -0.92
SMC4-223ENST00000493695 IGF2-ASQ6U949 168 aa9.29□□□□□ -0.92
SMC4-223ENST00000493695 PLD4Q96BZ4 506 aa9.29□□□□□ -0.92
SMC4-223ENST00000493695 MYO19Q96H55 970 aa9.29□□□□□ -0.92
SMC4-223ENST00000493695 TLR7Q9NYK1 1049 aaKnown RBP9.29□□□□□ -0.92
SMC4-223ENST00000493695 LRFN2Q9ULH4 789 aa9.29□□□□□ -0.92
SMC4-223ENST00000493695 NOS3P29474 1203 aa9.28□□□□□ -0.92
SMC4-223ENST00000493695 NRLP54845 237 aa9.28□□□□□ -0.92
SMC4-223ENST00000493695 LOC102724428A0A0B4J2F2 783 aa9.27□□□□□ -0.93
SMC4-223ENST00000493695 SIK1P57059 783 aa9.27□□□□□ -0.93
SMC4-223ENST00000493695 FKBP5Q13451 457 aaPredicted RBP9.27□□□□□ -0.93
SMC4-223ENST00000493695 CFAP70Q5T0N1 1121 aa9.27□□□□□ -0.93
SMC4-223ENST00000493695 IL22RA1Q8N6P7 574 aa9.27□□□□□ -0.93
SMC4-223ENST00000493695 C11orf16Q9NQ32 467 aa9.27□□□□□ -0.93
SMC4-223ENST00000493695 MMP20O60882 483 aa9.26□□□□□ -0.93
SMC4-223ENST00000493695 LRP8Q14114 963 aa9.26□□□□□ -0.93
SMC4-223ENST00000493695 COX20Q5RI15 118 aa9.26□□□□□ -0.93
SMC4-223ENST00000493695 DEAF1O75398 565 aaPredicted RBP9.25□□□□□ -0.93
SMC4-223ENST00000493695 TTC9Q92623 222 aa9.25□□□□□ -0.93
SMC4-223ENST00000493695 MKNK1Q9BUB5 465 aa9.25□□□□□ -0.93
SMC4-223ENST00000493695 SSBP4Q9BWG4 385 aaPredicted RBP9.25□□□□□ -0.93
SMC4-223ENST00000493695 KRTAP4-8Q9BYQ9 185 aa9.25□□□□□ -0.93
SMC4-223ENST00000493695 AKTIPQ9H8T0 292 aa9.25□□□□□ -0.93
SMC4-223ENST00000493695 ALX3O95076 343 aa9.24□□□□□ -0.93
SMC4-223ENST00000493695 MEGF10Q96KG7 1140 aa9.24□□□□□ -0.93
SMC4-223ENST00000493695 HYAL3O43820 417 aaPredicted RBP9.23□□□□□ -0.93
SMC4-223ENST00000493695 BRD2P25440 801 aaKnown RBP9.23□□□□□ -0.93
SMC4-223ENST00000493695 UBAP1LF5GYI3 381 aa9.22□□□□□ -0.93
SMC4-223ENST00000493695 EGFRP00533 1210 aa9.22□□□□□ -0.93
SMC4-223ENST00000493695 NAA30Q147X3 362 aaPredicted RBP9.22□□□□□ -0.93
SMC4-223ENST00000493695 MRPL18Q9H0U6 180 aaKnown RBP9.22□□□□□ -0.93
SMC4-223ENST00000493695 KCNMB2Q9Y691 235 aa9.22□□□□□ -0.93
SMC4-223ENST00000493695 C16orf46Q6P387 395 aa9.21□□□□□ -0.94
SMC4-223ENST00000493695 ILDR2Q71H61 639 aa9.21□□□□□ -0.94
SMC4-223ENST00000493695 NLRP13Q86W25 1043 aa9.21□□□□□ -0.94
SMC4-223ENST00000493695 ETFBKMTQ8IXQ9 262 aa9.21□□□□□ -0.94
SMC4-223ENST00000493695 SPACA7Q96KW9 195 aa9.21□□□□□ -0.94
SMC4-223ENST00000493695 SAP130Q9H0E3 1048 aa9.21□□□□□ -0.94
SMC4-223ENST00000493695 TRIM33Q9UPN9 1127 aa9.21□□□□□ -0.94
SMC4-223ENST00000493695 DLL1O00548 723 aa9.2□□□□□ -0.94
SMC4-223ENST00000493695 GLB1P16278 677 aa9.2□□□□□ -0.94
SMC4-223ENST00000493695 CDC25BP30305 580 aa9.2□□□□□ -0.94
SMC4-223ENST00000493695 SWI5Q1ZZU3 235 aa9.2□□□□□ -0.94
SMC4-223ENST00000493695 PRR23CQ6ZRP0 262 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms