RNA–Protein interactions for RNA: ENST00000492886.5

ATG3-206, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-206ENST00000492886 GOLGA2Q08379 1002 aa18.18■□□□□ 0.5
ATG3-206ENST00000492886 CCDC30Q5VVM6 783 aa18.18■□□□□ 0.5
ATG3-206ENST00000492886 TSR2Q969E8 191 aaKnown RBP18.18■□□□□ 0.5
ATG3-206ENST00000492886 CHMP4AQ9BY43 222 aa18.18■□□□□ 0.5
ATG3-206ENST00000492886 PPIP5K2O43314 1243 aa18.17■□□□□ 0.5
ATG3-206ENST00000492886 ITGBL1O95965 494 aaPredicted RBP18.17■□□□□ 0.5
ATG3-206ENST00000492886 SCNN1DP51172 638 aa18.17■□□□□ 0.5
ATG3-206ENST00000492886 AOC3Q16853 763 aa18.17■□□□□ 0.5
ATG3-206ENST00000492886 RIC3Q7Z5B4 369 aa18.17■□□□□ 0.5
ATG3-206ENST00000492886 ZBTB38Q8NAP3 1195 aaPredicted RBP18.17■□□□□ 0.5
ATG3-206ENST00000492886 CCDC191Q8NCU4 936 aa18.17■□□□□ 0.5
ATG3-206ENST00000492886 SUPT20HQ8NEM7 779 aa18.17■□□□□ 0.5
ATG3-206ENST00000492886 MRS2Q9HD23 443 aa18.17■□□□□ 0.5
ATG3-206ENST00000492886 TRPM7Q96QT4 1865 aa18.16■□□□□ 0.5
ATG3-206ENST00000492886 ANP32CO43423 234 aa18.16■□□□□ 0.5
ATG3-206ENST00000492886 KIAA2012Q0VF49 1180 aa18.16■□□□□ 0.5
ATG3-206ENST00000492886 MPNDQ8N594 471 aa18.16■□□□□ 0.5
ATG3-206ENST00000492886 CELF1Q92879 486 aaKnown RBP18.16■□□□□ 0.5
ATG3-206ENST00000492886 ZNF428Q96B54 188 aa18.16■□□□□ 0.5
ATG3-206ENST00000492886 METTL22Q9BUU2 404 aaPredicted RBP18.16■□□□□ 0.5
ATG3-206ENST00000492886 PSME4Q14997 1843 aa18.16■□□□□ 0.5
ATG3-206ENST00000492886 IRS4O14654 1257 aaPredicted RBP18.15■□□□□ 0.5
ATG3-206ENST00000492886 PCCAP05165 728 aaPredicted RBP18.15■□□□□ 0.5
ATG3-206ENST00000492886 DPP8Q6V1X1 898 aaPredicted RBP18.15■□□□□ 0.5
ATG3-206ENST00000492886 PNMA8AQ86V59 439 aaPredicted RBP18.15■□□□□ 0.5
ATG3-206ENST00000492886 NIM1KQ8IY84 436 aa18.15■□□□□ 0.5
ATG3-206ENST00000492886 TMX4Q9H1E5 349 aaPredicted RBP18.15■□□□□ 0.5
ATG3-206ENST00000492886 CREBZFQ9NS37 354 aa18.15■□□□□ 0.5
ATG3-206ENST00000492886 MYD88Q99836 296 aa18.14■□□□□ 0.49
ATG3-206ENST00000492886 ZNRF3Q9ULT6 936 aa18.14■□□□□ 0.49
ATG3-206ENST00000492886 CXCL9Q07325 125 aa18.13■□□□□ 0.49
ATG3-206ENST00000492886 TWISTNBQ3B726 338 aaPredicted RBP18.13■□□□□ 0.49
ATG3-206ENST00000492886 GJA3Q9Y6H8 435 aa18.13■□□□□ 0.49
ATG3-206ENST00000492886 SPEF2Q9C093 1822 aa18.13■□□□□ 0.49
ATG3-206ENST00000492886 SCN9AQ15858 1988 aa18.13■□□□□ 0.49
ATG3-206ENST00000492886 PCNTO95613 3336 aa18.13■□□□□ 0.49
ATG3-206ENST00000492886 DDX58O95786 925 aaKnown RBP18.12■□□□□ 0.49
ATG3-206ENST00000492886 IGKV5-2P06315 115 aa18.12■□□□□ 0.49
ATG3-206ENST00000492886 EPS15P42566 896 aa18.12■□□□□ 0.49
ATG3-206ENST00000492886 EAPPQ56P03 285 aaPredicted RBP18.12■□□□□ 0.49
ATG3-206ENST00000492886 RTL5Q5HYW3 569 aaPredicted RBP18.12■□□□□ 0.49
ATG3-206ENST00000492886 KSR2Q6VAB6 950 aa18.12■□□□□ 0.49
ATG3-206ENST00000492886 CDHR2Q9BYE9 1310 aa18.12■□□□□ 0.49
ATG3-206ENST00000492886 WDR63Q8IWG1 891 aa18.11■□□□□ 0.49
ATG3-206ENST00000492886 CWC25Q9NXE8 425 aaPredicted RBP18.11■□□□□ 0.49
ATG3-206ENST00000492886 MAP3K2Q9Y2U5 619 aa18.11■□□□□ 0.49
ATG3-206ENST00000492886 FANCIQ9NVI1 1328 aa18.11■□□□□ 0.49
ATG3-206ENST00000492886 ZNF646O15015 1829 aaPredicted RBP18.1■□□□□ 0.49
ATG3-206ENST00000492886 PI4KAP2A4QPH2 592 aa18.1■□□□□ 0.49
ATG3-206ENST00000492886 YDJCA8MPS7 323 aa18.1■□□□□ 0.49
ATG3-206ENST00000492886 G2E3Q7L622 706 aa18.1■□□□□ 0.49
ATG3-206ENST00000492886 PI4KAP1Q8N8J0 262 aa18.1■□□□□ 0.49
ATG3-206ENST00000492886 GPRC5DQ9NZD1 345 aa18.1■□□□□ 0.49
ATG3-206ENST00000492886 PDE8AO60658 829 aa18.09■□□□□ 0.49
ATG3-206ENST00000492886 HSP90B1P14625 803 aaKnown RBP18.09■□□□□ 0.49
ATG3-206ENST00000492886 LMOD1P29536 600 aaPredicted RBP18.09■□□□□ 0.49
ATG3-206ENST00000492886 RPS8P62241 208 aaKnown RBP18.09■□□□□ 0.49
ATG3-206ENST00000492886 GPSM2P81274 684 aa18.09■□□□□ 0.49
ATG3-206ENST00000492886 USP50Q70EL3 339 aaPredicted RBP18.09■□□□□ 0.49
ATG3-206ENST00000492886 CNTROBQ8N137 903 aa18.09■□□□□ 0.49
ATG3-206ENST00000492886 SEC31BQ9NQW1 1179 aa18.09■□□□□ 0.49
ATG3-206ENST00000492886 PODXL2Q9NZ53 605 aa18.09■□□□□ 0.49
ATG3-206ENST00000492886 POLLQ9UGP5 575 aa18.09■□□□□ 0.49
ATG3-206ENST00000492886 CNTNAP1P78357 1384 aa18.08■□□□□ 0.49
ATG3-206ENST00000492886 IFFO2Q5TF58 517 aa18.08■□□□□ 0.48
ATG3-206ENST00000492886 MAP1SQ66K74 1059 aaPredicted RBP18.08■□□□□ 0.48
ATG3-206ENST00000492886 CIAPIN1Q6FI81 312 aa18.08■□□□□ 0.48
ATG3-206ENST00000492886 STK31Q9BXU1 1019 aa18.08■□□□□ 0.48
ATG3-206ENST00000492886 THSD7BQ9C0I4 1608 aa18.08■□□□□ 0.48
ATG3-206ENST00000492886 RTL9Q8NET4 1388 aa18.07■□□□□ 0.48
ATG3-206ENST00000492886 TMEM88BA6NKF7 163 aa18.07■□□□□ 0.48
ATG3-206ENST00000492886 VAMP4O75379 141 aa18.07■□□□□ 0.48
ATG3-206ENST00000492886 SPINK5Q9NQ38 1064 aaPredicted RBP18.07■□□□□ 0.48
ATG3-206ENST00000492886 ADARB2Q9NS39 739 aaKnown RBP18.07■□□□□ 0.48
ATG3-206ENST00000492886 NSFL1CQ9UNZ2 370 aaKnown RBP18.07■□□□□ 0.48
ATG3-206ENST00000492886 CLEC11AQ9Y240 323 aa18.07■□□□□ 0.48
ATG3-206ENST00000492886 A0A1B0GUL6 1792 aa18.07■□□□□ 0.48
ATG3-206ENST00000492886 NEURL1BA8MQ27 555 aa18.06■□□□□ 0.48
ATG3-206ENST00000492886 SLC4A2P04920 1241 aa18.06■□□□□ 0.48
ATG3-206ENST00000492886 GMPSP49915 693 aaPredicted RBP18.06■□□□□ 0.48
ATG3-206ENST00000492886 WASHC4Q2M389 1173 aa18.06■□□□□ 0.48
ATG3-206ENST00000492886 CCDC152Q4G0S7 254 aa18.06■□□□□ 0.48
ATG3-206ENST00000492886 TBC1D16Q8TBP0 767 aa18.06■□□□□ 0.48
ATG3-206ENST00000492886 JARID2Q92833 1246 aaPredicted RBP18.06■□□□□ 0.48
ATG3-206ENST00000492886 PGAP2Q9UHJ9 254 aa18.06■□□□□ 0.48
ATG3-206ENST00000492886 POLR2AP24928 1970 aaKnown RBP18.06■□□□□ 0.48
ATG3-206ENST00000492886 H7C1W4 665 aa18.05■□□□□ 0.48
ATG3-206ENST00000492886 FLIIQ13045 1269 aa18.05■□□□□ 0.48
ATG3-206ENST00000492886 TNIP1Q15025 636 aa18.05■□□□□ 0.48
ATG3-206ENST00000492886 CWF19L2Q2TBE0 894 aaKnown RBP18.05■□□□□ 0.48
ATG3-206ENST00000492886 ZNF609O15014 1411 aa18.05■□□□□ 0.48
ATG3-206ENST00000492886 ZNF521Q96K83 1311 aa18.04■□□□□ 0.48
ATG3-206ENST00000492886 RAD17O75943 681 aa18.04■□□□□ 0.48
ATG3-206ENST00000492886 CASP7P55210 303 aa18.04■□□□□ 0.48
ATG3-206ENST00000492886 CTSWP56202 376 aa18.04■□□□□ 0.48
ATG3-206ENST00000492886 EXOSC9Q06265 439 aaKnown RBP18.04■□□□□ 0.48
ATG3-206ENST00000492886 TTLL11Q8NHH1 800 aa18.04■□□□□ 0.48
ATG3-206ENST00000492886 MKRN1Q9UHC7 482 aaKnown RBP18.04■□□□□ 0.48
ATG3-206ENST00000492886 RASSF10A6NK89 507 aa18.03■□□□□ 0.48
ATG3-206ENST00000492886 NEXNQ0ZGT2 675 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms