RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 ZFATQ9P243 1243 aa6.94□□□□□ -1.3
VPS36-205ENST00000492650 OPLAHO14841 1288 aa6.93□□□□□ -1.3
VPS36-205ENST00000492650 MLLT1Q03111 559 aaPredicted RBP6.93□□□□□ -1.3
VPS36-205ENST00000492650 DHX32Q7L7V1 743 aaKnown RBP6.93□□□□□ -1.3
VPS36-205ENST00000492650 TREML1Q86YW5 311 aa6.93□□□□□ -1.3
VPS36-205ENST00000492650 NAGPAQ9UK23 515 aa6.93□□□□□ -1.3
VPS36-205ENST00000492650 RTCBQ9Y3I0 505 aaKnown RBP6.93□□□□□ -1.3
VPS36-205ENST00000492650 MAP3K6O95382 1288 aa6.92□□□□□ -1.3
VPS36-205ENST00000492650 ARID4AP29374 1257 aaPredicted RBP6.92□□□□□ -1.3
VPS36-205ENST00000492650 AFF1P51825 1210 aaKnown RBP6.92□□□□□ -1.3
VPS36-205ENST00000492650 RAC1P63000 192 aa6.92□□□□□ -1.3
VPS36-205ENST00000492650 DMRTC2Q8IXT2 367 aaPredicted RBP6.92□□□□□ -1.3
VPS36-205ENST00000492650 CCDC97Q96F63 343 aaPredicted RBP6.92□□□□□ -1.3
VPS36-205ENST00000492650 MKNK1Q9BUB5 465 aa6.92□□□□□ -1.3
VPS36-205ENST00000492650 SEMA6BQ9H3T3 888 aa6.92□□□□□ -1.3
VPS36-205ENST00000492650 C11orf16Q9NQ32 467 aa6.92□□□□□ -1.3
VPS36-205ENST00000492650 A0A0A0MRY4 1105 aa6.91□□□□□ -1.3
VPS36-205ENST00000492650 ZBTB42B2RXF5 422 aa6.91□□□□□ -1.3
VPS36-205ENST00000492650 XYLBO75191 536 aa6.91□□□□□ -1.3
VPS36-205ENST00000492650 SRPK2P78362 688 aaKnown RBP6.91□□□□□ -1.3
VPS36-205ENST00000492650 FAM69CQ0P6D2 419 aa6.91□□□□□ -1.3
VPS36-205ENST00000492650 OCLNQ16625 522 aa6.91□□□□□ -1.3
VPS36-205ENST00000492650 ELMSAN1Q6PJG2 1045 aa6.91□□□□□ -1.3
VPS36-205ENST00000492650 HFE2Q6ZVN8 426 aa6.91□□□□□ -1.3
VPS36-205ENST00000492650 ATG7O95352 703 aa6.9□□□□□ -1.3
VPS36-205ENST00000492650 ELNP15502 786 aa6.9□□□□□ -1.3
VPS36-205ENST00000492650 BRD2P25440 801 aaKnown RBP6.9□□□□□ -1.3
VPS36-205ENST00000492650 NAA30Q147X3 362 aaPredicted RBP6.9□□□□□ -1.3
VPS36-205ENST00000492650 PERM1Q5SV97 790 aa6.9□□□□□ -1.3
VPS36-205ENST00000492650 C16orf46Q6P387 395 aa6.9□□□□□ -1.3
VPS36-205ENST00000492650 TRPM4Q8TD43 1214 aa6.9□□□□□ -1.3
VPS36-205ENST00000492650 SAP130Q9H0E3 1048 aa6.9□□□□□ -1.3
VPS36-205ENST00000492650 C9orf172C9J069 976 aa6.89□□□□□ -1.31
VPS36-205ENST00000492650 GPLD1P80108 840 aa6.89□□□□□ -1.31
VPS36-205ENST00000492650 TMEM164Q5U3C3 297 aa6.89□□□□□ -1.31
VPS36-205ENST00000492650 CXXC1Q9P0U4 656 aaPredicted RBP6.89□□□□□ -1.31
VPS36-205ENST00000492650 EGFRP00533 1210 aa6.88□□□□□ -1.31
VPS36-205ENST00000492650 PSAPP07602 524 aa6.88□□□□□ -1.31
VPS36-205ENST00000492650 EIF2AK2P19525 551 aaKnown RBP6.88□□□□□ -1.31
VPS36-205ENST00000492650 MSL1Q68DK7 614 aa6.88□□□□□ -1.31
VPS36-205ENST00000492650 CAPN12Q6ZSI9 719 aa6.88□□□□□ -1.31
VPS36-205ENST00000492650 ETFBKMTQ8IXQ9 262 aa6.88□□□□□ -1.31
VPS36-205ENST00000492650 LPIN3Q9BQK8 851 aa6.88□□□□□ -1.31
VPS36-205ENST00000492650 SMG9Q9H0W8 520 aaKnown RBP6.88□□□□□ -1.31
VPS36-205ENST00000492650 TPSG1Q9NRR2 321 aa6.88□□□□□ -1.31
VPS36-205ENST00000492650 TLR7Q9NYK1 1049 aaKnown RBP6.88□□□□□ -1.31
VPS36-205ENST00000492650 FRRS1LQ9P0K9 344 aa6.88□□□□□ -1.31
VPS36-205ENST00000492650 SERPINA10Q9UK55 444 aa6.88□□□□□ -1.31
VPS36-205ENST00000492650 USP21Q9UK80 565 aa6.88□□□□□ -1.31
VPS36-205ENST00000492650 ARID3CA6NKF2 412 aa6.87□□□□□ -1.31
VPS36-205ENST00000492650 PTCD1O75127 700 aaKnown RBP6.87□□□□□ -1.31
VPS36-205ENST00000492650 SELPP16109 830 aa6.87□□□□□ -1.31
VPS36-205ENST00000492650 PLAURQ03405 335 aa6.87□□□□□ -1.31
VPS36-205ENST00000492650 SHISA2Q6UWI4 295 aa6.87□□□□□ -1.31
VPS36-205ENST00000492650 WFDC8Q8IUA0 241 aa6.87□□□□□ -1.31
VPS36-205ENST00000492650 FMR1NBQ8N0W7 255 aaPredicted RBP6.87□□□□□ -1.31
VPS36-205ENST00000492650 COL26A1Q96A83 441 aa6.87□□□□□ -1.31
VPS36-205ENST00000492650 PBXIP1Q96AQ6 731 aa6.87□□□□□ -1.31
VPS36-205ENST00000492650 KCNMB2Q9Y691 235 aa6.87□□□□□ -1.31
VPS36-205ENST00000492650 J3QW42 95 aa6.86□□□□□ -1.31
VPS36-205ENST00000492650 MMP20O60882 483 aa6.86□□□□□ -1.31
VPS36-205ENST00000492650 NRLP54845 237 aa6.86□□□□□ -1.31
VPS36-205ENST00000492650 NRG1Q02297 640 aaPredicted RBP6.86□□□□□ -1.31
VPS36-205ENST00000492650 PIK3R5Q8WYR1 880 aa6.86□□□□□ -1.31
VPS36-205ENST00000492650 NSUN5Q96P11 429 aaKnown RBP6.86□□□□□ -1.31
VPS36-205ENST00000492650 LOC102724428A0A0B4J2F2 783 aa6.85□□□□□ -1.31
VPS36-205ENST00000492650 GHRHP01286 108 aa6.85□□□□□ -1.31
VPS36-205ENST00000492650 SIK1P57059 783 aa6.85□□□□□ -1.31
VPS36-205ENST00000492650 ADGRE1Q14246 886 aa6.85□□□□□ -1.31
VPS36-205ENST00000492650 MBTPS1Q14703 1052 aa6.85□□□□□ -1.31
VPS36-205ENST00000492650 GRIK5Q16478 980 aa6.85□□□□□ -1.31
VPS36-205ENST00000492650 RSPO4Q2I0M5 234 aaPredicted RBP6.85□□□□□ -1.31
VPS36-205ENST00000492650 CLP1Q92989 425 aaKnown RBP6.85□□□□□ -1.31
VPS36-205ENST00000492650 LENG1Q96BZ8 264 aaPredicted RBP6.85□□□□□ -1.31
VPS36-205ENST00000492650 FAM13BQ9NYF5 915 aa6.85□□□□□ -1.31
VPS36-205ENST00000492650 GTF3C3Q9Y5Q9 886 aa6.85□□□□□ -1.31
VPS36-205ENST00000492650 UBAP1LF5GYI3 381 aa6.84□□□□□ -1.31
VPS36-205ENST00000492650 FAM26DQ5JW98 314 aa6.84□□□□□ -1.31
VPS36-205ENST00000492650 GDF6Q6KF10 455 aaPredicted RBP6.84□□□□□ -1.31
VPS36-205ENST00000492650 NLRP13Q86W25 1043 aa6.84□□□□□ -1.31
VPS36-205ENST00000492650 DTWD1Q8N5C7 304 aa6.84□□□□□ -1.31
VPS36-205ENST00000492650 TTC9Q92623 222 aa6.84□□□□□ -1.31
VPS36-205ENST00000492650 PLD4Q96BZ4 506 aa6.84□□□□□ -1.31
VPS36-205ENST00000492650 RBSNQ9H1K0 784 aa6.84□□□□□ -1.31
VPS36-205ENST00000492650 STIM2Q9P246 746 aa6.84□□□□□ -1.31
VPS36-205ENST00000492650 TNFRSF10BO14763 440 aa6.83□□□□□ -1.32
VPS36-205ENST00000492650 ATP2B4P23634 1241 aa6.83□□□□□ -1.32
VPS36-205ENST00000492650 ITGB7P26010 798 aa6.83□□□□□ -1.32
VPS36-205ENST00000492650 ZAP70P43403 619 aa6.83□□□□□ -1.32
VPS36-205ENST00000492650 NKAPLQ5M9Q1 402 aa6.83□□□□□ -1.32
VPS36-205ENST00000492650 TXNRD3Q86VQ6 643 aa6.83□□□□□ -1.32
VPS36-205ENST00000492650 FBXO11Q86XK2 927 aa6.83□□□□□ -1.32
VPS36-205ENST00000492650 FNDC3AQ9Y2H6 1198 aaKnown RBP6.83□□□□□ -1.32
VPS36-205ENST00000492650 DYRK3O43781 588 aa6.82□□□□□ -1.32
VPS36-205ENST00000492650 TRIP4Q15650 581 aaPredicted RBP6.82□□□□□ -1.32
VPS36-205ENST00000492650 ILDR2Q71H61 639 aa6.82□□□□□ -1.32
VPS36-205ENST00000492650 GPR152Q8TDT2 470 aa6.82□□□□□ -1.32
VPS36-205ENST00000492650 SOX18P35713 384 aa6.81□□□□□ -1.32
VPS36-205ENST00000492650 XP32Q5T750 250 aa6.81□□□□□ -1.32
VPS36-205ENST00000492650 TTC39BQ5VTQ0 682 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms