RNA–Protein interactions for RNA: ENST00000492348.6

RBBP4-214, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 1,547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-214ENST00000492348 LAPTM4BQ86VI4 370 aa8.88□□□□□ -0.99
RBBP4-214ENST00000492348 IFNL2Q8IZJ0 200 aa8.88□□□□□ -0.99
RBBP4-214ENST00000492348 CARD10Q9BWT7 1032 aa8.88□□□□□ -0.99
RBBP4-214ENST00000492348 TMEM134Q9H6X4 195 aa8.88□□□□□ -0.99
RBBP4-214ENST00000492348 CHPF2Q9P2E5 772 aa8.88□□□□□ -0.99
RBBP4-214ENST00000492348 PCDH11XQ9BZA7 1347 aa8.87□□□□□ -0.99
RBBP4-214ENST00000492348 PCDH11YQ9BZA8 1340 aa8.87□□□□□ -0.99
RBBP4-214ENST00000492348 GIGYF1O75420 1035 aaPredicted RBP8.87□□□□□ -0.99
RBBP4-214ENST00000492348 FAM98CQ17RN3 349 aaKnown RBP8.87□□□□□ -0.99
RBBP4-214ENST00000492348 CEP85Q6P2H3 762 aa8.87□□□□□ -0.99
RBBP4-214ENST00000492348 LARP1Q6PKG0 1096 aaKnown RBP8.87□□□□□ -0.99
RBBP4-214ENST00000492348 TOM1L2Q6ZVM7 507 aa8.87□□□□□ -0.99
RBBP4-214ENST00000492348 ANKRD44Q8N8A2 993 aa8.87□□□□□ -0.99
RBBP4-214ENST00000492348 IL27Q8NEV9 243 aa8.87□□□□□ -0.99
RBBP4-214ENST00000492348 PHAXQ9H814 394 aaKnown RBP8.87□□□□□ -0.99
RBBP4-214ENST00000492348 FAM217BQ9NTX9 383 aaPredicted RBP8.87□□□□□ -0.99
RBBP4-214ENST00000492348 RREB1Q92766 1687 aa8.87□□□□□ -0.99
RBBP4-214ENST00000492348 CASZ1Q86V15 1759 aa8.86□□□□□ -0.99
RBBP4-214ENST00000492348 ANXA1P04083 346 aa8.86□□□□□ -0.99
RBBP4-214ENST00000492348 SLC39A6Q13433 755 aa8.86□□□□□ -0.99
RBBP4-214ENST00000492348 PROSER3Q2NL68 480 aa8.86□□□□□ -0.99
RBBP4-214ENST00000492348 DDRGK1Q96HY6 314 aa8.86□□□□□ -0.99
RBBP4-214ENST00000492348 DCAF5Q96JK2 942 aa8.86□□□□□ -0.99
RBBP4-214ENST00000492348 FAM117AQ9C073 453 aa8.86□□□□□ -0.99
RBBP4-214ENST00000492348 EIF2S2P20042 333 aaKnown RBP8.85□□□□□ -0.99
RBBP4-214ENST00000492348 ZNF790Q6PG37 636 aa8.85□□□□□ -0.99
RBBP4-214ENST00000492348 SLC4A10Q6U841 1118 aa8.85□□□□□ -0.99
RBBP4-214ENST00000492348 CHD1LQ86WJ1 897 aa8.85□□□□□ -0.99
RBBP4-214ENST00000492348 GCC1Q96CN9 775 aa8.85□□□□□ -0.99
RBBP4-214ENST00000492348 LNPKQ9C0E8 428 aa8.85□□□□□ -0.99
RBBP4-214ENST00000492348 COL5A3P25940 1745 aaPredicted RBP8.85□□□□□ -0.99
RBBP4-214ENST00000492348 MYH3P11055 1940 aa8.85□□□□□ -0.99
RBBP4-214ENST00000492348 HRO43593 1189 aa8.85□□□□□ -0.99
RBBP4-214ENST00000492348 HSP90AB1P08238 724 aaKnown RBP8.85□□□□□ -0.99
RBBP4-214ENST00000492348 IL2RBP14784 551 aa8.85□□□□□ -0.99
RBBP4-214ENST00000492348 ANP32AP39687 249 aaKnown RBP8.85□□□□□ -0.99
RBBP4-214ENST00000492348 NPM2Q86SE8 214 aaKnown RBP8.85□□□□□ -0.99
RBBP4-214ENST00000492348 KRTAP3-3Q9BYR6 98 aa8.85□□□□□ -0.99
RBBP4-214ENST00000492348 KRTAP3-2Q9BYR7 98 aa8.85□□□□□ -0.99
RBBP4-214ENST00000492348 STRN4Q9NRL3 753 aa8.85□□□□□ -0.99
RBBP4-214ENST00000492348 NUP98P52948 1817 aa8.84□□□□□ -0.99
RBBP4-214ENST00000492348 SULF1Q8IWU6 871 aa8.84□□□□□ -0.99
RBBP4-214ENST00000492348 RPAP2Q8IXW5 612 aaPredicted RBP8.84□□□□□ -0.99
RBBP4-214ENST00000492348 NFATC2IPQ8NCF5 419 aa8.84□□□□□ -0.99
RBBP4-214ENST00000492348 ZCRB1Q8TBF4 217 aaKnown RBP8.84□□□□□ -0.99
RBBP4-214ENST00000492348 ZNF496Q96IT1 587 aaPredicted RBP8.84□□□□□ -0.99
RBBP4-214ENST00000492348 DCTPP1Q9H773 170 aa8.84□□□□□ -0.99
RBBP4-214ENST00000492348 SWT1Q5T5J6 900 aaKnown RBP8.83□□□□□ -1
RBBP4-214ENST00000492348 BTG4Q9NY30 223 aa8.83□□□□□ -1
RBBP4-214ENST00000492348 DBF4Q9UBU7 674 aaPredicted RBP8.83□□□□□ -1
RBBP4-214ENST00000492348 SLIT2O94813 1529 aa8.83□□□□□ -1
RBBP4-214ENST00000492348 ZNF831Q5JPB2 1677 aa8.82□□□□□ -1
RBBP4-214ENST00000492348 THSD7AQ9UPZ6 1657 aa8.82□□□□□ -1
RBBP4-214ENST00000492348 DDX11L8A8MPP1 907 aa8.82□□□□□ -1
RBBP4-214ENST00000492348 GNAI2P04899 355 aa8.82□□□□□ -1
RBBP4-214ENST00000492348 BEND3Q5T5X7 828 aa8.82□□□□□ -1
RBBP4-214ENST00000492348 LRP10Q7Z4F1 713 aa8.82□□□□□ -1
RBBP4-214ENST00000492348 DNAAF4Q8WXU2 420 aa8.82□□□□□ -1
RBBP4-214ENST00000492348 USP44Q9H0E7 712 aa8.82□□□□□ -1
RBBP4-214ENST00000492348 RGS17Q9UGC6 210 aaPredicted RBP8.82□□□□□ -1
RBBP4-214ENST00000492348 SBF2Q86WG5 1849 aa8.82□□□□□ -1
RBBP4-214ENST00000492348 BCORQ6W2J9 1755 aa8.82□□□□□ -1
RBBP4-214ENST00000492348 PI4KAP2A4QPH2 592 aa8.81□□□□□ -1
RBBP4-214ENST00000492348 GNAI3P08754 354 aa8.81□□□□□ -1
RBBP4-214ENST00000492348 ANKRD45Q5TZF3 282 aa8.81□□□□□ -1
RBBP4-214ENST00000492348 PI4KAP1Q8N8J0 262 aa8.81□□□□□ -1
RBBP4-214ENST00000492348 ZFRQ96KR1 1074 aaKnown RBP8.81□□□□□ -1
RBBP4-214ENST00000492348 IPO9Q96P70 1041 aaKnown RBP8.81□□□□□ -1
RBBP4-214ENST00000492348 BEGAINQ9BUH8 593 aa8.81□□□□□ -1
RBBP4-214ENST00000492348 CHMP4AQ9BY43 222 aa8.81□□□□□ -1
RBBP4-214ENST00000492348 SRCIN1Q9C0H9 1055 aa8.81□□□□□ -1
RBBP4-214ENST00000492348 DDX21Q9NR30 783 aaKnown RBP eCLIP8.81□□□□□ -1
RBBP4-214ENST00000492348 LRRFIP2Q9Y608 721 aaKnown RBP8.81□□□□□ -1
RBBP4-214ENST00000492348 MYH14Q7Z406 1995 aaKnown RBP8.81□□□□□ -1
RBBP4-214ENST00000492348 IBTKQ9P2D0 1353 aaPredicted RBP8.81□□□□□ -1
RBBP4-214ENST00000492348 LAMB2P55268 1798 aa8.8□□□□□ -1
RBBP4-214ENST00000492348 PNMA6EA0A0J9YXQ4 647 aa8.8□□□□□ -1
RBBP4-214ENST00000492348 ERVV-2B6SEH9 535 aa8.8□□□□□ -1
RBBP4-214ENST00000492348 SLC4A3P48751 1232 aa8.8□□□□□ -1
RBBP4-214ENST00000492348 CABP4P57796 275 aa8.8□□□□□ -1
RBBP4-214ENST00000492348 EVA1CP58658 441 aa8.8□□□□□ -1
RBBP4-214ENST00000492348 SAMD7Q7Z3H4 446 aa8.8□□□□□ -1
RBBP4-214ENST00000492348 FMNL2Q96PY5 1086 aa8.8□□□□□ -1
RBBP4-214ENST00000492348 HYPKQ9NX55 129 aa8.8□□□□□ -1
RBBP4-214ENST00000492348 BTAF1O14981 1849 aa8.8□□□□□ -1
RBBP4-214ENST00000492348 GOLGA8CPA6NN73 597 aa8.8□□□□□ -1
RBBP4-214ENST00000492348 HMMRO75330 724 aa8.8□□□□□ -1
RBBP4-214ENST00000492348 CD46P15529 392 aa8.8□□□□□ -1
RBBP4-214ENST00000492348 BMP2KLQ5H9B9 411 aa8.8□□□□□ -1
RBBP4-214ENST00000492348 KSR2Q6VAB6 950 aa8.8□□□□□ -1
RBBP4-214ENST00000492348 TTC5Q8N0Z6 440 aa8.8□□□□□ -1
RBBP4-214ENST00000492348 OTUD7AQ8TE49 926 aaPredicted RBP8.8□□□□□ -1
RBBP4-214ENST00000492348 MAP3K2Q9Y2U5 619 aa8.8□□□□□ -1
RBBP4-214ENST00000492348 NHSQ6T4R5 1651 aa8.8□□□□□ -1
RBBP4-214ENST00000492348 SMARCA5O60264 1052 aaPredicted RBP8.79□□□□□ -1
RBBP4-214ENST00000492348 SNRPA1P09661 255 aaKnown RBP8.79□□□□□ -1
RBBP4-214ENST00000492348 NBPF7P0C2Y1 421 aaPredicted RBP8.79□□□□□ -1
RBBP4-214ENST00000492348 UBTFL1P0CB47 393 aaPredicted RBP8.79□□□□□ -1
RBBP4-214ENST00000492348 GSPT1P15170 499 aaKnown RBP8.79□□□□□ -1
RBBP4-214ENST00000492348 ATP8B2P98198 1209 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms