RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 ISCA1Q9BUE6 129 aa14.28□□□□□ -0.12
TMEM39A-211ENST00000491685 SPEF2Q9C093 1822 aa14.28□□□□□ -0.12
TMEM39A-211ENST00000491685 PPIP5K2O43314 1243 aa14.27□□□□□ -0.13
TMEM39A-211ENST00000491685 EIF6P56537 245 aaKnown RBP14.27□□□□□ -0.13
TMEM39A-211ENST00000491685 DBF4Q9UBU7 674 aaPredicted RBP14.27□□□□□ -0.13
TMEM39A-211ENST00000491685 CLEC11AQ9Y240 323 aa14.27□□□□□ -0.13
TMEM39A-211ENST00000491685 EPS15P42566 896 aa14.26□□□□□ -0.13
TMEM39A-211ENST00000491685 VEGFBP49765 207 aa14.26□□□□□ -0.13
TMEM39A-211ENST00000491685 CALD1Q05682 793 aaKnown RBP14.26□□□□□ -0.13
TMEM39A-211ENST00000491685 FMR1Q06787 632 aaKnown RBP eCLIP14.26□□□□□ -0.13
TMEM39A-211ENST00000491685 NIM1KQ8IY84 436 aa14.26□□□□□ -0.13
TMEM39A-211ENST00000491685 WBP1LQ9NX94 342 aa14.26□□□□□ -0.13
TMEM39A-211ENST00000491685 TMEM88BA6NKF7 163 aa14.25□□□□□ -0.13
TMEM39A-211ENST00000491685 ELL2O00472 640 aaPredicted RBP14.25□□□□□ -0.13
TMEM39A-211ENST00000491685 GRAPQ13588 217 aa14.25□□□□□ -0.13
TMEM39A-211ENST00000491685 GRIPAP1Q4V328 841 aa14.25□□□□□ -0.13
TMEM39A-211ENST00000491685 RTL5Q5HYW3 569 aaPredicted RBP14.25□□□□□ -0.13
TMEM39A-211ENST00000491685 ANKRD13DQ6ZTN6 518 aa14.25□□□□□ -0.13
TMEM39A-211ENST00000491685 GRAPLQ8TC17 118 aaPredicted RBP14.25□□□□□ -0.13
TMEM39A-211ENST00000491685 FAM89AQ96GI7 184 aa14.25□□□□□ -0.13
TMEM39A-211ENST00000491685 RTFDC1Q9BY42 306 aaPredicted RBP14.25□□□□□ -0.13
TMEM39A-211ENST00000491685 PHAXQ9H814 394 aaKnown RBP14.25□□□□□ -0.13
TMEM39A-211ENST00000491685 SCN9AQ15858 1988 aa14.25□□□□□ -0.13
TMEM39A-211ENST00000491685 MYH3P11055 1940 aa14.24□□□□□ -0.13
TMEM39A-211ENST00000491685 LBX1P52954 281 aa14.24□□□□□ -0.13
TMEM39A-211ENST00000491685 NCBP3Q53F19 620 aaKnown RBP14.24□□□□□ -0.13
TMEM39A-211ENST00000491685 DPP8Q6V1X1 898 aaPredicted RBP14.24□□□□□ -0.13
TMEM39A-211ENST00000491685 DDX46Q7L014 1031 aaKnown RBP14.24□□□□□ -0.13
TMEM39A-211ENST00000491685 PNMA8AQ86V59 439 aaPredicted RBP14.24□□□□□ -0.13
TMEM39A-211ENST00000491685 SP8Q8IXZ3 490 aa14.24□□□□□ -0.13
TMEM39A-211ENST00000491685 CNTROBQ8N137 903 aa14.24□□□□□ -0.13
TMEM39A-211ENST00000491685 C8orf58Q8NAV2 365 aa14.24□□□□□ -0.13
TMEM39A-211ENST00000491685 CELF1Q92879 486 aaKnown RBP14.24□□□□□ -0.13
TMEM39A-211ENST00000491685 IFT57Q9NWB7 429 aa14.24□□□□□ -0.13
TMEM39A-211ENST00000491685 BBOX1O75936 387 aa14.23□□□□□ -0.13
TMEM39A-211ENST00000491685 LMOD1P29536 600 aaPredicted RBP14.23□□□□□ -0.13
TMEM39A-211ENST00000491685 CXCL9Q07325 125 aa14.23□□□□□ -0.13
TMEM39A-211ENST00000491685 FAM161AQ3B820 660 aa14.23□□□□□ -0.13
TMEM39A-211ENST00000491685 MPNDQ8N594 471 aa14.23□□□□□ -0.13
TMEM39A-211ENST00000491685 ABHD8Q96I13 439 aa14.23□□□□□ -0.13
TMEM39A-211ENST00000491685 TMX4Q9H1E5 349 aaPredicted RBP14.23□□□□□ -0.13
TMEM39A-211ENST00000491685 HYPKQ9NX55 129 aa14.23□□□□□ -0.13
TMEM39A-211ENST00000491685 YDJCA8MPS7 323 aa14.22□□□□□ -0.13
TMEM39A-211ENST00000491685 KIAA2012Q0VF49 1180 aa14.22□□□□□ -0.13
TMEM39A-211ENST00000491685 TSPYL6Q8N831 410 aa14.22□□□□□ -0.13
TMEM39A-211ENST00000491685 PSME4Q14997 1843 aa14.22□□□□□ -0.13
TMEM39A-211ENST00000491685 ZNF646O15015 1829 aaPredicted RBP14.21□□□□□ -0.13
TMEM39A-211ENST00000491685 SHTN1A0MZ66 631 aa14.21□□□□□ -0.13
TMEM39A-211ENST00000491685 RASSF10A6NK89 507 aa14.21□□□□□ -0.13
TMEM39A-211ENST00000491685 HSPA8P11142 646 aaKnown RBP14.21□□□□□ -0.13
TMEM39A-211ENST00000491685 GMPSP49915 693 aaPredicted RBP14.21□□□□□ -0.13
TMEM39A-211ENST00000491685 GNAI1P63096 354 aa14.21□□□□□ -0.13
TMEM39A-211ENST00000491685 SF3B3Q15393 1217 aaKnown RBP14.21□□□□□ -0.13
TMEM39A-211ENST00000491685 SUPT20HQ8NEM7 779 aa14.21□□□□□ -0.13
TMEM39A-211ENST00000491685 GPRC5DQ9NZD1 345 aa14.21□□□□□ -0.13
TMEM39A-211ENST00000491685 ZNRF3Q9ULT6 936 aa14.21□□□□□ -0.13
TMEM39A-211ENST00000491685 TRAF5O00463 557 aa14.2□□□□□ -0.14
TMEM39A-211ENST00000491685 IRS4O14654 1257 aaPredicted RBP14.2□□□□□ -0.14
TMEM39A-211ENST00000491685 RAD17O75943 681 aa14.2□□□□□ -0.14
TMEM39A-211ENST00000491685 RIC3Q7Z5B4 369 aa14.2□□□□□ -0.14
TMEM39A-211ENST00000491685 JARID2Q92833 1246 aaPredicted RBP14.2□□□□□ -0.14
TMEM39A-211ENST00000491685 TSR2Q969E8 191 aaKnown RBP14.2□□□□□ -0.14
TMEM39A-211ENST00000491685 GPR101Q96P66 508 aaPredicted RBP14.2□□□□□ -0.14
TMEM39A-211ENST00000491685 MYD88Q99836 296 aa14.2□□□□□ -0.14
TMEM39A-211ENST00000491685 VPS33BQ9H267 617 aa14.2□□□□□ -0.14
TMEM39A-211ENST00000491685 GPSM2P81274 684 aa14.19□□□□□ -0.14
TMEM39A-211ENST00000491685 MAP2K1Q02750 393 aaPredicted RBP14.19□□□□□ -0.14
TMEM39A-211ENST00000491685 GOLGA2Q08379 1002 aa14.19□□□□□ -0.14
TMEM39A-211ENST00000491685 TRIM28Q13263 835 aaKnown RBP14.19□□□□□ -0.14
TMEM39A-211ENST00000491685 CCDC27Q2M243 656 aa14.19□□□□□ -0.14
TMEM39A-211ENST00000491685 CIAPIN1Q6FI81 312 aa14.19□□□□□ -0.14
TMEM39A-211ENST00000491685 CHMP4AQ9BY43 222 aa14.19□□□□□ -0.14
TMEM39A-211ENST00000491685 SEC31BQ9NQW1 1179 aa14.19□□□□□ -0.14
TMEM39A-211ENST00000491685 PCDH10Q9P2E7 1040 aa14.19□□□□□ -0.14
TMEM39A-211ENST00000491685 DEFB115Q30KQ5 88 aa14.18□□□□□ -0.14
TMEM39A-211ENST00000491685 USP50Q70EL3 339 aaPredicted RBP14.18□□□□□ -0.14
TMEM39A-211ENST00000491685 TRPM4Q8TD43 1214 aa14.18□□□□□ -0.14
TMEM39A-211ENST00000491685 ADARB2Q9NS39 739 aaKnown RBP14.18□□□□□ -0.14
TMEM39A-211ENST00000491685 POLLQ9UGP5 575 aa14.18□□□□□ -0.14
TMEM39A-211ENST00000491685 POLR2AP24928 1970 aaKnown RBP14.18□□□□□ -0.14
TMEM39A-211ENST00000491685 RIMBP2O15034 1052 aa14.17□□□□□ -0.14
TMEM39A-211ENST00000491685 HIRAP54198 1017 aaPredicted RBP14.17□□□□□ -0.14
TMEM39A-211ENST00000491685 CST9Q5W186 159 aa14.17□□□□□ -0.14
TMEM39A-211ENST00000491685 TMC4Q7Z404 712 aa14.17□□□□□ -0.14
TMEM39A-211ENST00000491685 ZBTB38Q8NAP3 1195 aaPredicted RBP14.17□□□□□ -0.14
TMEM39A-211ENST00000491685 CCDC85AQ96PX6 553 aaPredicted RBP14.17□□□□□ -0.14
TMEM39A-211ENST00000491685 DBNDD1Q9H9R9 158 aa14.17□□□□□ -0.14
TMEM39A-211ENST00000491685 NSFL1CQ9UNZ2 370 aaKnown RBP14.17□□□□□ -0.14
TMEM39A-211ENST00000491685 SALL2Q9Y467 1007 aaPredicted RBP14.17□□□□□ -0.14
TMEM39A-211ENST00000491685 RTL9Q8NET4 1388 aa14.17□□□□□ -0.14
TMEM39A-211ENST00000491685 A0A1B0GUL6 1792 aa14.17□□□□□ -0.14
TMEM39A-211ENST00000491685 WDR33Q9C0J8 1336 aaKnown RBP14.16□□□□□ -0.14
TMEM39A-211ENST00000491685 RGS19P49795 217 aa14.16□□□□□ -0.14
TMEM39A-211ENST00000491685 MLLT1Q03111 559 aaPredicted RBP14.16□□□□□ -0.14
TMEM39A-211ENST00000491685 GLIS2Q9BZE0 524 aaPredicted RBP14.16□□□□□ -0.14
TMEM39A-211ENST00000491685 KCNQ5Q9NR82 932 aa14.16□□□□□ -0.14
TMEM39A-211ENST00000491685 ABT1Q9ULW3 272 aaKnown RBP14.16□□□□□ -0.14
TMEM39A-211ENST00000491685 ZBTB12Q9Y330 459 aaPredicted RBP14.16□□□□□ -0.14
TMEM39A-211ENST00000491685 TNRC18O15417 2968 aaPredicted RBP14.15□□□□□ -0.14
TMEM39A-211ENST00000491685 PCCAP05165 728 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 242.3 ms