RNA–Protein interactions for RNA: ENST00000491335.1

NDUFB4-204, Transcript of NADH:ubiquinone oxidoreductase subunit B4, humanhuman

TSL 2

Gene NDUFB4, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB4-204ENST00000491335 PDE8AO60658 829 aa23.65■■□□□ 1.38
NDUFB4-204ENST00000491335 GRIPAP1Q4V328 841 aa23.65■■□□□ 1.38
NDUFB4-204ENST00000491335 SP8Q8IXZ3 490 aa23.65■■□□□ 1.38
NDUFB4-204ENST00000491335 PSMD1Q99460 953 aa23.65■■□□□ 1.38
NDUFB4-204ENST00000491335 TMX4Q9H1E5 349 aaPredicted RBP23.65■■□□□ 1.38
NDUFB4-204ENST00000491335 CDHR2Q9BYE9 1310 aa23.64■■□□□ 1.38
NDUFB4-204ENST00000491335 GLTPD2A6NH11 291 aa23.64■■□□□ 1.37
NDUFB4-204ENST00000491335 C1QTNF8P60827 252 aa23.64■■□□□ 1.37
NDUFB4-204ENST00000491335 LINS1Q8NG48 757 aa23.64■■□□□ 1.37
NDUFB4-204ENST00000491335 H7C1W4 665 aa23.63■■□□□ 1.37
NDUFB4-204ENST00000491335 IARSP41252 1262 aaKnown RBP23.63■■□□□ 1.37
NDUFB4-204ENST00000491335 GCKRQ14397 625 aa23.63■■□□□ 1.37
NDUFB4-204ENST00000491335 MRPL50Q8N5N7 158 aaKnown RBP23.63■■□□□ 1.37
NDUFB4-204ENST00000491335 CELF1Q92879 486 aaKnown RBP23.63■■□□□ 1.37
NDUFB4-204ENST00000491335 RRAGCQ9HB90 399 aa23.62■■□□□ 1.37
NDUFB4-204ENST00000491335 DPY19L2Q6NUT2 758 aa23.61■■□□□ 1.37
NDUFB4-204ENST00000491335 UBE3BQ7Z3V4 1068 aa23.61■■□□□ 1.37
NDUFB4-204ENST00000491335 SSH1Q8WYL5 1049 aa23.61■■□□□ 1.37
NDUFB4-204ENST00000491335 SEC31BQ9NQW1 1179 aa23.61■■□□□ 1.37
NDUFB4-204ENST00000491335 RPS8P62241 208 aaKnown RBP23.6■■□□□ 1.37
NDUFB4-204ENST00000491335 CCDC152Q4G0S7 254 aa23.6■■□□□ 1.37
NDUFB4-204ENST00000491335 BEND3Q5T5X7 828 aa23.6■■□□□ 1.37
NDUFB4-204ENST00000491335 TMC4Q7Z404 712 aa23.6■■□□□ 1.37
NDUFB4-204ENST00000491335 CCDC85AQ96PX6 553 aaPredicted RBP23.6■■□□□ 1.37
NDUFB4-204ENST00000491335 COL4A1P02462 1669 aa23.6■■□□□ 1.37
NDUFB4-204ENST00000491335 MPNDQ8N594 471 aa23.59■■□□□ 1.37
NDUFB4-204ENST00000491335 CASP7P55210 303 aa23.58■■□□□ 1.37
NDUFB4-204ENST00000491335 HNRNPUQ00839 825 aaKnown RBP eCLIP23.58■■□□□ 1.37
NDUFB4-204ENST00000491335 BCL2L13Q9BXK5 485 aa23.58■■□□□ 1.37
NDUFB4-204ENST00000491335 MYH3P11055 1940 aa23.58■■□□□ 1.37
NDUFB4-204ENST00000491335 CTSWP56202 376 aa23.57■■□□□ 1.36
NDUFB4-204ENST00000491335 SLC4A10Q6U841 1118 aa23.57■■□□□ 1.36
NDUFB4-204ENST00000491335 DPP8Q6V1X1 898 aaPredicted RBP23.57■■□□□ 1.36
NDUFB4-204ENST00000491335 TTLL11Q8NHH1 800 aa23.57■■□□□ 1.36
NDUFB4-204ENST00000491335 DDNO94850 711 aaPredicted RBP23.56■■□□□ 1.36
NDUFB4-204ENST00000491335 ALDH1L2Q3SY69 923 aa23.56■■□□□ 1.36
NDUFB4-204ENST00000491335 LARGE2Q8N3Y3 721 aa23.56■■□□□ 1.36
NDUFB4-204ENST00000491335 JDP2Q8WYK2 163 aa23.56■■□□□ 1.36
NDUFB4-204ENST00000491335 RTFDC1Q9BY42 306 aaPredicted RBP23.56■■□□□ 1.36
NDUFB4-204ENST00000491335 FZD9O00144 591 aa23.55■■□□□ 1.36
NDUFB4-204ENST00000491335 CT47B1P0C2W7 299 aaPredicted RBP23.55■■□□□ 1.36
NDUFB4-204ENST00000491335 SUPT20HQ8NEM7 779 aa23.55■■□□□ 1.36
NDUFB4-204ENST00000491335 PLA2G12BQ9BX93 195 aa23.55■■□□□ 1.36
NDUFB4-204ENST00000491335 COL4A5P29400 1685 aa23.54■■□□□ 1.36
NDUFB4-204ENST00000491335 LRRC37AA6NMS7 1700 aa23.54■■□□□ 1.36
NDUFB4-204ENST00000491335 POTECB2RU33 542 aa23.54■■□□□ 1.36
NDUFB4-204ENST00000491335 PPIP5K2O43314 1243 aa23.54■■□□□ 1.36
NDUFB4-204ENST00000491335 VEGFAP15692 232 aaPredicted RBP23.54■■□□□ 1.36
NDUFB4-204ENST00000491335 ZNF541Q9H0D2 1346 aa23.54■■□□□ 1.36
NDUFB4-204ENST00000491335 TOMM70O94826 608 aa23.53■■□□□ 1.36
NDUFB4-204ENST00000491335 AOC3Q16853 763 aa23.53■■□□□ 1.36
NDUFB4-204ENST00000491335 C16orf71Q8IYS4 520 aaPredicted RBP23.53■■□□□ 1.36
NDUFB4-204ENST00000491335 SRCIN1Q9C0H9 1055 aa23.53■■□□□ 1.36
NDUFB4-204ENST00000491335 VPS33BQ9H267 617 aa23.53■■□□□ 1.36
NDUFB4-204ENST00000491335 GREM2Q9H772 168 aa23.53■■□□□ 1.36
NDUFB4-204ENST00000491335 SMC4Q9NTJ3 1288 aa23.53■■□□□ 1.36
NDUFB4-204ENST00000491335 NSFL1CQ9UNZ2 370 aaKnown RBP23.53■■□□□ 1.36
NDUFB4-204ENST00000491335 PTPRCP08575 1304 aa23.53■■□□□ 1.36
NDUFB4-204ENST00000491335 ALDH1L1O75891 902 aa23.52■■□□□ 1.36
NDUFB4-204ENST00000491335 GPSM2P81274 684 aa23.52■■□□□ 1.36
NDUFB4-204ENST00000491335 WDR90Q96KV7 1748 aa23.52■■□□□ 1.36
NDUFB4-204ENST00000491335 ANKRD18AQ8IVF6 992 aa23.51■■□□□ 1.35
NDUFB4-204ENST00000491335 GRM8O00222 908 aa23.5■■□□□ 1.35
NDUFB4-204ENST00000491335 CSF1RP07333 972 aa23.5■■□□□ 1.35
NDUFB4-204ENST00000491335 NIM1KQ8IY84 436 aa23.5■■□□□ 1.35
NDUFB4-204ENST00000491335 CDC5LQ99459 802 aaKnown RBP23.5■■□□□ 1.35
NDUFB4-204ENST00000491335 C9orf78Q9NZ63 289 aaPredicted RBP23.5■■□□□ 1.35
NDUFB4-204ENST00000491335 RTL9Q8NET4 1388 aa23.5■■□□□ 1.35
NDUFB4-204ENST00000491335 DUOX1Q9NRD9 1551 aa23.49■■□□□ 1.35
NDUFB4-204ENST00000491335 EIF6P56537 245 aaKnown RBP23.49■■□□□ 1.35
NDUFB4-204ENST00000491335 KIAA2012Q0VF49 1180 aa23.49■■□□□ 1.35
NDUFB4-204ENST00000491335 POLLQ9UGP5 575 aa23.49■■□□□ 1.35
NDUFB4-204ENST00000491335 C6orf229H3BNL8 230 aa23.48■■□□□ 1.35
NDUFB4-204ENST00000491335 FOXO4P98177 505 aa23.48■■□□□ 1.35
NDUFB4-204ENST00000491335 RBM46Q8TBY0 533 aaKnown RBP23.48■■□□□ 1.35
NDUFB4-204ENST00000491335 RARSP54136 660 aaKnown RBP23.47■■□□□ 1.35
NDUFB4-204ENST00000491335 FAM161AQ3B820 660 aa23.47■■□□□ 1.35
NDUFB4-204ENST00000491335 L3MBTL3Q96JM7 780 aaPredicted RBP23.47■■□□□ 1.35
NDUFB4-204ENST00000491335 SPEF2Q9C093 1822 aa23.47■■□□□ 1.35
NDUFB4-204ENST00000491335 ITGA6P23229 1130 aa23.46■■□□□ 1.35
NDUFB4-204ENST00000491335 WASHC4Q2M389 1173 aa23.46■■□□□ 1.35
NDUFB4-204ENST00000491335 EPHA10Q5JZY3 1008 aa23.46■■□□□ 1.35
NDUFB4-204ENST00000491335 GPC2Q8N158 579 aa23.46■■□□□ 1.35
NDUFB4-204ENST00000491335 TBC1D16Q8TBP0 767 aa23.46■■□□□ 1.35
NDUFB4-204ENST00000491335 BSDC1Q9NW68 430 aaPredicted RBP23.46■■□□□ 1.35
NDUFB4-204ENST00000491335 PODXL2Q9NZ53 605 aa23.46■■□□□ 1.35
NDUFB4-204ENST00000491335 ANKIB1Q9P2G1 1089 aa23.46■■□□□ 1.35
NDUFB4-204ENST00000491335 ZNRF3Q9ULT6 936 aa23.46■■□□□ 1.35
NDUFB4-204ENST00000491335 NOB1Q9ULX3 412 aaKnown RBP23.46■■□□□ 1.35
NDUFB4-204ENST00000491335 GJA3Q9Y6H8 435 aa23.46■■□□□ 1.35
NDUFB4-204ENST00000491335 LTBP1Q14766 1721 aa23.45■■□□□ 1.34
NDUFB4-204ENST00000491335 RIMBP2O15034 1052 aa23.45■■□□□ 1.34
NDUFB4-204ENST00000491335 BRPF1P55201 1214 aaPredicted RBP23.45■■□□□ 1.34
NDUFB4-204ENST00000491335 GPR101Q96P66 508 aaPredicted RBP23.45■■□□□ 1.34
NDUFB4-204ENST00000491335 NBPF7P0C2Y1 421 aaPredicted RBP23.44■■□□□ 1.34
NDUFB4-204ENST00000491335 LMBR1LQ6UX01 489 aa23.44■■□□□ 1.34
NDUFB4-204ENST00000491335 MINPP1Q9UNW1 487 aa23.44■■□□□ 1.34
NDUFB4-204ENST00000491335 SCN4AP35499 1836 aa23.43■■□□□ 1.34
NDUFB4-204ENST00000491335 UFL1O94874 794 aa23.43■■□□□ 1.34
NDUFB4-204ENST00000491335 IGHMBP2P38935 993 aaKnown RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms