RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 C1QTNF9BB2RNN3 333 aa7.9□□□□□ -1.14
HMGN1-218ENST00000490032 TARSP26639 723 aaKnown RBP7.9□□□□□ -1.14
HMGN1-218ENST00000490032 PCSK7Q16549 785 aa7.9□□□□□ -1.14
HMGN1-218ENST00000490032 DHX32Q7L7V1 743 aaKnown RBP7.9□□□□□ -1.14
HMGN1-218ENST00000490032 CD163Q86VB7 1156 aa7.9□□□□□ -1.14
HMGN1-218ENST00000490032 TRPM4Q8TD43 1214 aa7.9□□□□□ -1.14
HMGN1-218ENST00000490032 IGFLR1Q9H665 355 aa7.9□□□□□ -1.14
HMGN1-218ENST00000490032 NAGPAQ9UK23 515 aa7.9□□□□□ -1.14
HMGN1-218ENST00000490032 USP20Q9Y2K6 914 aa7.9□□□□□ -1.14
HMGN1-218ENST00000490032 KCNMB2Q9Y691 235 aa7.9□□□□□ -1.14
HMGN1-218ENST00000490032 ZBTB42B2RXF5 422 aa7.89□□□□□ -1.15
HMGN1-218ENST00000490032 LILRB5O75023 590 aa7.89□□□□□ -1.15
HMGN1-218ENST00000490032 SASH3O75995 380 aa7.89□□□□□ -1.15
HMGN1-218ENST00000490032 RARAP10276 462 aa7.89□□□□□ -1.15
HMGN1-218ENST00000490032 NAA30Q147X3 362 aaPredicted RBP7.89□□□□□ -1.15
HMGN1-218ENST00000490032 KRT25Q7Z3Z0 450 aa7.89□□□□□ -1.15
HMGN1-218ENST00000490032 RGL4Q8IZJ4 473 aa7.89□□□□□ -1.15
HMGN1-218ENST00000490032 TMEM88BA6NKF7 163 aa7.88□□□□□ -1.15
HMGN1-218ENST00000490032 XYLBO75191 536 aa7.88□□□□□ -1.15
HMGN1-218ENST00000490032 CHRNA4P43681 627 aa7.88□□□□□ -1.15
HMGN1-218ENST00000490032 GPLD1P80108 840 aa7.88□□□□□ -1.15
HMGN1-218ENST00000490032 PSAPL1Q6NUJ1 521 aa7.88□□□□□ -1.15
HMGN1-218ENST00000490032 ILDR2Q71H61 639 aa7.88□□□□□ -1.15
HMGN1-218ENST00000490032 CMTR1Q8N1G2 835 aaKnown RBP7.88□□□□□ -1.15
HMGN1-218ENST00000490032 NRLP54845 237 aa7.87□□□□□ -1.15
HMGN1-218ENST00000490032 SUZ12Q15022 739 aaKnown RBP7.87□□□□□ -1.15
HMGN1-218ENST00000490032 PRRT3Q5FWE3 981 aa7.87□□□□□ -1.15
HMGN1-218ENST00000490032 JPH1Q9HDC5 661 aaPredicted RBP7.87□□□□□ -1.15
HMGN1-218ENST00000490032 TLR7Q9NYK1 1049 aaKnown RBP7.87□□□□□ -1.15
HMGN1-218ENST00000490032 FRRS1LQ9P0K9 344 aa7.87□□□□□ -1.15
HMGN1-218ENST00000490032 STIM2Q9P246 746 aa7.87□□□□□ -1.15
HMGN1-218ENST00000490032 HOXD8P13378 290 aaPredicted RBP7.86□□□□□ -1.15
HMGN1-218ENST00000490032 BAG6P46379 1132 aa7.86□□□□□ -1.15
HMGN1-218ENST00000490032 AFF1P51825 1210 aaKnown RBP7.86□□□□□ -1.15
HMGN1-218ENST00000490032 TRIP4Q15650 581 aaPredicted RBP7.86□□□□□ -1.15
HMGN1-218ENST00000490032 FAM35AQ86V20 835 aa7.86□□□□□ -1.15
HMGN1-218ENST00000490032 NUDT8Q8WV74 236 aa7.86□□□□□ -1.15
HMGN1-218ENST00000490032 TTC9Q92623 222 aa7.86□□□□□ -1.15
HMGN1-218ENST00000490032 LPIN3Q9BQK8 851 aa7.86□□□□□ -1.15
HMGN1-218ENST00000490032 FAM13BQ9NYF5 915 aa7.86□□□□□ -1.15
HMGN1-218ENST00000490032 SEPT3Q9UH03 358 aa7.86□□□□□ -1.15
HMGN1-218ENST00000490032 RGS9O75916 674 aaPredicted RBP7.85□□□□□ -1.15
HMGN1-218ENST00000490032 ARID4AP29374 1257 aaPredicted RBP7.85□□□□□ -1.15
HMGN1-218ENST00000490032 ZAP70P43403 619 aa7.85□□□□□ -1.15
HMGN1-218ENST00000490032 TRIM28Q13263 835 aaKnown RBP7.85□□□□□ -1.15
HMGN1-218ENST00000490032 ABTB2Q8N961 1025 aa7.85□□□□□ -1.15
HMGN1-218ENST00000490032 ZBTB39O15060 712 aa7.84□□□□□ -1.15
HMGN1-218ENST00000490032 CPB1P15086 417 aa7.84□□□□□ -1.15
HMGN1-218ENST00000490032 SOX18P35713 384 aa7.84□□□□□ -1.15
HMGN1-218ENST00000490032 GRIK5Q16478 980 aa7.84□□□□□ -1.15
HMGN1-218ENST00000490032 PERM1Q5SV97 790 aa7.84□□□□□ -1.15
HMGN1-218ENST00000490032 NLRP13Q86W25 1043 aa7.84□□□□□ -1.15
HMGN1-218ENST00000490032 PIK3R5Q8WYR1 880 aa7.84□□□□□ -1.15
HMGN1-218ENST00000490032 A0A0A0MRY4 1105 aa7.83□□□□□ -1.16
HMGN1-218ENST00000490032 FAM229AH3BQW9 127 aa7.83□□□□□ -1.16
HMGN1-218ENST00000490032 MMP20O60882 483 aa7.83□□□□□ -1.16
HMGN1-218ENST00000490032 SSFA2P28290 1259 aa7.83□□□□□ -1.16
HMGN1-218ENST00000490032 MLLT1Q03111 559 aaPredicted RBP7.83□□□□□ -1.16
HMGN1-218ENST00000490032 PLAURQ03405 335 aa7.83□□□□□ -1.16
HMGN1-218ENST00000490032 TRAPPC3LQ5T215 181 aa7.83□□□□□ -1.16
HMGN1-218ENST00000490032 APBA3O96018 575 aa7.82□□□□□ -1.16
HMGN1-218ENST00000490032 PSAPP07602 524 aa7.82□□□□□ -1.16
HMGN1-218ENST00000490032 ELMSAN1Q6PJG2 1045 aa7.82□□□□□ -1.16
HMGN1-218ENST00000490032 HELQQ8TDG4 1101 aa7.82□□□□□ -1.16
HMGN1-218ENST00000490032 NACC1Q96RE7 527 aa7.82□□□□□ -1.16
HMGN1-218ENST00000490032 UBAP1LF5GYI3 381 aa7.81□□□□□ -1.16
HMGN1-218ENST00000490032 ADAM23O75077 832 aa7.81□□□□□ -1.16
HMGN1-218ENST00000490032 ERICH6Q7L0X2 663 aa7.81□□□□□ -1.16
HMGN1-218ENST00000490032 FNDC3AQ9Y2H6 1198 aaKnown RBP7.81□□□□□ -1.16
HMGN1-218ENST00000490032 LOC102724428A0A0B4J2F2 783 aa7.8□□□□□ -1.16
HMGN1-218ENST00000490032 ELNP15502 786 aa7.8□□□□□ -1.16
HMGN1-218ENST00000490032 SCNN1AP37088 669 aa7.8□□□□□ -1.16
HMGN1-218ENST00000490032 GATA4P43694 442 aa7.8□□□□□ -1.16
HMGN1-218ENST00000490032 SIK1P57059 783 aa7.8□□□□□ -1.16
HMGN1-218ENST00000490032 GRIK4Q16099 956 aa7.8□□□□□ -1.16
HMGN1-218ENST00000490032 MSL1Q68DK7 614 aa7.8□□□□□ -1.16
HMGN1-218ENST00000490032 HFE2Q6ZVN8 426 aa7.8□□□□□ -1.16
HMGN1-218ENST00000490032 OR13H1Q8NG92 308 aa7.8□□□□□ -1.16
HMGN1-218ENST00000490032 GPR152Q8TDT2 470 aa7.8□□□□□ -1.16
HMGN1-218ENST00000490032 RAC1P63000 192 aa7.79□□□□□ -1.16
HMGN1-218ENST00000490032 PHLDB3Q6NSJ2 640 aa7.79□□□□□ -1.16
HMGN1-218ENST00000490032 DMRTC2Q8IXT2 367 aaPredicted RBP7.79□□□□□ -1.16
HMGN1-218ENST00000490032 FMR1NBQ8N0W7 255 aaPredicted RBP7.79□□□□□ -1.16
HMGN1-218ENST00000490032 DTWD1Q8N5C7 304 aa7.79□□□□□ -1.16
HMGN1-218ENST00000490032 SMG9Q9H0W8 520 aaKnown RBP7.79□□□□□ -1.16
HMGN1-218ENST00000490032 J3QW42 95 aa7.78□□□□□ -1.16
HMGN1-218ENST00000490032 SELPP16109 830 aa7.78□□□□□ -1.16
HMGN1-218ENST00000490032 EIF2AK2P19525 551 aaKnown RBP7.78□□□□□ -1.16
HMGN1-218ENST00000490032 PLD4Q96BZ4 506 aa7.78□□□□□ -1.16
HMGN1-218ENST00000490032 LOC100996750A0A140TA64 210 aa7.77□□□□□ -1.17
HMGN1-218ENST00000490032 C9orf172C9J069 976 aa7.77□□□□□ -1.17
HMGN1-218ENST00000490032 K7ELQ4 463 aaPredicted RBP7.77□□□□□ -1.17
HMGN1-218ENST00000490032 FURINP09958 794 aa7.77□□□□□ -1.17
HMGN1-218ENST00000490032 PDE12Q6L8Q7 609 aaKnown RBP7.77□□□□□ -1.17
HMGN1-218ENST00000490032 GTF3C2Q8WUA4 911 aaPredicted RBP7.77□□□□□ -1.17
HMGN1-218ENST00000490032 LENG1Q96BZ8 264 aaPredicted RBP7.77□□□□□ -1.17
HMGN1-218ENST00000490032 NSUN5Q96P11 429 aaKnown RBP7.77□□□□□ -1.17
HMGN1-218ENST00000490032 KRTAP4-6Q9BYQ5 205 aa7.77□□□□□ -1.17
HMGN1-218ENST00000490032 GHRHP01286 108 aa7.76□□□□□ -1.17
HMGN1-218ENST00000490032 NPR3P17342 541 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms