RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 GNAI3P08754 354 aa20.07■□□□□ 0.8
HDAC7-224ENST00000488927 UBTFL1P0CB47 393 aaPredicted RBP20.07■□□□□ 0.8
HDAC7-224ENST00000488927 PDE3AQ14432 1141 aa20.07■□□□□ 0.8
HDAC7-224ENST00000488927 PELP1Q8IZL8 1130 aaKnown RBP20.07■□□□□ 0.8
HDAC7-224ENST00000488927 TTLL11Q8NHH1 800 aa20.07■□□□□ 0.8
HDAC7-224ENST00000488927 TNNQ9UQP3 1299 aa20.07■□□□□ 0.8
HDAC7-224ENST00000488927 RTL9Q8NET4 1388 aa20.07■□□□□ 0.8
HDAC7-224ENST00000488927 BBOX1O75936 387 aa20.06■□□□□ 0.8
HDAC7-224ENST00000488927 CSF1RP07333 972 aa20.06■□□□□ 0.8
HDAC7-224ENST00000488927 GRAPQ13588 217 aa20.06■□□□□ 0.8
HDAC7-224ENST00000488927 SOGA3Q5TF21 947 aa20.06■□□□□ 0.8
HDAC7-224ENST00000488927 PRPF40BQ6NWY9 871 aaKnown RBP20.06■□□□□ 0.8
HDAC7-224ENST00000488927 ITPRIPQ8IWB1 547 aa20.06■□□□□ 0.8
HDAC7-224ENST00000488927 GRAPLQ8TC17 118 aaPredicted RBP20.06■□□□□ 0.8
HDAC7-224ENST00000488927 TMC4Q7Z404 712 aa20.05■□□□□ 0.8
HDAC7-224ENST00000488927 CHMP4BQ9H444 224 aaKnown RBP20.05■□□□□ 0.8
HDAC7-224ENST00000488927 BRCA1P38398 1863 aaKnown RBP20.05■□□□□ 0.8
HDAC7-224ENST00000488927 PLIN1O60240 522 aa20.04■□□□□ 0.8
HDAC7-224ENST00000488927 RLBP1P12271 317 aa20.04■□□□□ 0.8
HDAC7-224ENST00000488927 FOXO4P98177 505 aa20.04■□□□□ 0.8
HDAC7-224ENST00000488927 SUCLG2Q96I99 432 aa20.04■□□□□ 0.8
HDAC7-224ENST00000488927 CDC5LQ99459 802 aaKnown RBP20.04■□□□□ 0.8
HDAC7-224ENST00000488927 TMX4Q9H1E5 349 aaPredicted RBP20.04■□□□□ 0.8
HDAC7-224ENST00000488927 WWC3Q9ULE0 1092 aa20.04■□□□□ 0.8
HDAC7-224ENST00000488927 YBX3P16989 372 aaKnown RBP eCLIP20.03■□□□□ 0.8
HDAC7-224ENST00000488927 RRP1P56182 461 aaKnown RBP20.03■□□□□ 0.8
HDAC7-224ENST00000488927 GRIPAP1Q4V328 841 aa20.03■□□□□ 0.8
HDAC7-224ENST00000488927 CC2D2BQ6DHV5 1058 aa20.03■□□□□ 0.8
HDAC7-224ENST00000488927 PANK1Q8TE04 598 aa20.03■□□□□ 0.8
HDAC7-224ENST00000488927 MEIS3Q99687 375 aa20.03■□□□□ 0.8
HDAC7-224ENST00000488927 PPEF1O14829 653 aaPredicted RBP20.02■□□□□ 0.8
HDAC7-224ENST00000488927 MVPQ14764 893 aaKnown RBP20.02■□□□□ 0.8
HDAC7-224ENST00000488927 RABL6Q3YEC7 729 aaPredicted RBP20.02■□□□□ 0.8
HDAC7-224ENST00000488927 LMBR1LQ6UX01 489 aa20.02■□□□□ 0.8
HDAC7-224ENST00000488927 GREM2Q9H772 168 aa20.02■□□□□ 0.8
HDAC7-224ENST00000488927 DDX19BQ9UMR2 479 aa20.02■□□□□ 0.8
HDAC7-224ENST00000488927 RPS8P62241 208 aaKnown RBP20.01■□□□□ 0.79
HDAC7-224ENST00000488927 IFIT5Q13325 482 aaKnown RBP20.01■□□□□ 0.79
HDAC7-224ENST00000488927 KAZALD1Q96I82 304 aa20.01■□□□□ 0.79
HDAC7-224ENST00000488927 CCDC85AQ96PX6 553 aaPredicted RBP20.01■□□□□ 0.79
HDAC7-224ENST00000488927 BICC1Q9H694 974 aaKnown RBP20.01■□□□□ 0.79
HDAC7-224ENST00000488927 CHMP3Q9Y3E7 222 aa20.01■□□□□ 0.79
HDAC7-224ENST00000488927 ANKRD18BA2A2Z9 1011 aa20■□□□□ 0.79
HDAC7-224ENST00000488927 C21orf2O43822 256 aa20■□□□□ 0.79
HDAC7-224ENST00000488927 GNAI2P04899 355 aa20■□□□□ 0.79
HDAC7-224ENST00000488927 ITGA6P23229 1130 aa20■□□□□ 0.79
HDAC7-224ENST00000488927 CCDC57Q2TAC2 916 aa20■□□□□ 0.79
HDAC7-224ENST00000488927 FAM161AQ3B820 660 aa20■□□□□ 0.79
HDAC7-224ENST00000488927 EPHA10Q5JZY3 1008 aa20■□□□□ 0.79
HDAC7-224ENST00000488927 ANKRD18AQ8IVF6 992 aa20■□□□□ 0.79
HDAC7-224ENST00000488927 C7orf43Q8WVR3 580 aa20■□□□□ 0.79
HDAC7-224ENST00000488927 ATP6V0A2Q9Y487 856 aa20■□□□□ 0.79
HDAC7-224ENST00000488927 MYH3P11055 1940 aa20■□□□□ 0.79
HDAC7-224ENST00000488927 ZBTB7BO15156 539 aaPredicted RBP19.99■□□□□ 0.79
HDAC7-224ENST00000488927 CCDC93Q567U6 631 aa19.99■□□□□ 0.79
HDAC7-224ENST00000488927 SP8Q8IXZ3 490 aa19.99■□□□□ 0.79
HDAC7-224ENST00000488927 RTKN2Q8IZC4 609 aa19.99■□□□□ 0.79
HDAC7-224ENST00000488927 CELF1Q92879 486 aaKnown RBP19.99■□□□□ 0.79
HDAC7-224ENST00000488927 SEC31BQ9NQW1 1179 aa19.99■□□□□ 0.79
HDAC7-224ENST00000488927 ARFGEF1Q9Y6D6 1849 aa19.99■□□□□ 0.79
HDAC7-224ENST00000488927 IGHMBP2P38935 993 aaKnown RBP19.98■□□□□ 0.79
HDAC7-224ENST00000488927 ANKRD44Q8N8A2 993 aa19.98■□□□□ 0.79
HDAC7-224ENST00000488927 COG6Q9Y2V7 657 aa19.98■□□□□ 0.79
HDAC7-224ENST00000488927 LRRFIP2Q9Y608 721 aaKnown RBP19.98■□□□□ 0.79
HDAC7-224ENST00000488927 ARHGAP27Q6ZUM4 889 aa19.97■□□□□ 0.79
HDAC7-224ENST00000488927 ZNF219Q9P2Y4 722 aaPredicted RBP19.97■□□□□ 0.79
HDAC7-224ENST00000488927 SLX4Q8IY92 1834 aa19.97■□□□□ 0.79
HDAC7-224ENST00000488927 GOLGB1Q14789 3259 aaKnown RBP19.96■□□□□ 0.79
HDAC7-224ENST00000488927 TAF7LQ5H9L4 462 aa19.96■□□□□ 0.79
HDAC7-224ENST00000488927 MPHOSPH8Q99549 860 aa19.96■□□□□ 0.79
HDAC7-224ENST00000488927 BSDC1Q9NW68 430 aaPredicted RBP19.96■□□□□ 0.79
HDAC7-224ENST00000488927 C20orf194Q5TEA3 1177 aa19.95■□□□□ 0.78
HDAC7-224ENST00000488927 MTX1Q13505 466 aa19.94■□□□□ 0.78
HDAC7-224ENST00000488927 LTBP3Q9NS15 1303 aa19.94■□□□□ 0.78
HDAC7-224ENST00000488927 PSMD1Q99460 953 aa19.93■□□□□ 0.78
HDAC7-224ENST00000488927 TAOK3Q9H2K8 898 aa19.93■□□□□ 0.78
HDAC7-224ENST00000488927 FKBP4Q02790 459 aaKnown RBP eCLIP19.92■□□□□ 0.78
HDAC7-224ENST00000488927 MPNDQ8N594 471 aa19.92■□□□□ 0.78
HDAC7-224ENST00000488927 SUPT20HQ8NEM7 779 aa19.92■□□□□ 0.78
HDAC7-224ENST00000488927 SUPT16HQ9Y5B9 1047 aaKnown RBP19.92■□□□□ 0.78
HDAC7-224ENST00000488927 CACNA1SQ13698 1873 aa19.92■□□□□ 0.78
HDAC7-224ENST00000488927 DPP8Q6V1X1 898 aaPredicted RBP19.91■□□□□ 0.78
HDAC7-224ENST00000488927 LDHAL6AQ6ZMR3 332 aa19.91■□□□□ 0.78
HDAC7-224ENST00000488927 ZBTB40Q9NUA8 1239 aa19.91■□□□□ 0.78
HDAC7-224ENST00000488927 NFKBIEO00221 500 aa19.9■□□□□ 0.78
HDAC7-224ENST00000488927 SRGAP3O43295 1099 aa19.9■□□□□ 0.78
HDAC7-224ENST00000488927 OLFM4Q6UX06 510 aa19.9■□□□□ 0.78
HDAC7-224ENST00000488927 ANKRD2Q9GZV1 360 aa19.9■□□□□ 0.78
HDAC7-224ENST00000488927 VPS33BQ9H267 617 aa19.9■□□□□ 0.78
HDAC7-224ENST00000488927 CNNM1Q9NRU3 951 aa19.9■□□□□ 0.78
HDAC7-224ENST00000488927 PODXL2Q9NZ53 605 aa19.9■□□□□ 0.78
HDAC7-224ENST00000488927 FBXO3Q9UK99 471 aa19.9■□□□□ 0.78
HDAC7-224ENST00000488927 SNED1Q8TER0 1413 aa19.9■□□□□ 0.78
HDAC7-224ENST00000488927 LRRC37AA6NMS7 1700 aa19.89■□□□□ 0.77
HDAC7-224ENST00000488927 CENPBP07199 599 aaPredicted RBP19.89■□□□□ 0.77
HDAC7-224ENST00000488927 XDHP47989 1333 aa19.89■□□□□ 0.77
HDAC7-224ENST00000488927 RTFDC1Q9BY42 306 aaPredicted RBP19.89■□□□□ 0.77
HDAC7-224ENST00000488927 ANKIB1Q9P2G1 1089 aa19.89■□□□□ 0.77
HDAC7-224ENST00000488927 MINPP1Q9UNW1 487 aa19.89■□□□□ 0.77
HDAC7-224ENST00000488927 NSFL1CQ9UNZ2 370 aaKnown RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms