RNA–Protein interactions for RNA: ENST00000488759.5

LRMDA-205, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 3

Gene LRMDA, Length 337 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-205ENST00000488759 GRAPQ13588 217 aa13.81□□□□□ -0.2
LRMDA-205ENST00000488759 GRAPLQ8TC17 118 aaPredicted RBP13.81□□□□□ -0.2
LRMDA-205ENST00000488759 FAM89AQ96GI7 184 aa13.81□□□□□ -0.2
LRMDA-205ENST00000488759 LRRC37AA6NMS7 1700 aa13.81□□□□□ -0.2
LRMDA-205ENST00000488759 LTBP1Q14766 1721 aa13.81□□□□□ -0.2
LRMDA-205ENST00000488759 ADAMTSL1Q8N6G6 1762 aa13.81□□□□□ -0.2
LRMDA-205ENST00000488759 C6orf229H3BNL8 230 aa13.8□□□□□ -0.2
LRMDA-205ENST00000488759 DDX58O95786 925 aaKnown RBP13.8□□□□□ -0.2
LRMDA-205ENST00000488759 HOXB7P09629 217 aa13.8□□□□□ -0.2
LRMDA-205ENST00000488759 CNTROBQ8N137 903 aa13.8□□□□□ -0.2
LRMDA-205ENST00000488759 MYD88Q99836 296 aa13.8□□□□□ -0.2
LRMDA-205ENST00000488759 ZNF408Q9H9D4 720 aa13.8□□□□□ -0.2
LRMDA-205ENST00000488759 IFT57Q9NWB7 429 aa13.8□□□□□ -0.2
LRMDA-205ENST00000488759 BBOX1O75936 387 aa13.79□□□□□ -0.2
LRMDA-205ENST00000488759 RAD17O75943 681 aa13.79□□□□□ -0.2
LRMDA-205ENST00000488759 COL13A1Q5TAT6 717 aaPredicted RBP13.79□□□□□ -0.2
LRMDA-205ENST00000488759 STK31Q9BXU1 1019 aa13.79□□□□□ -0.2
LRMDA-205ENST00000488759 CNTNAP1P78357 1384 aa13.79□□□□□ -0.2
LRMDA-205ENST00000488759 IRS4O14654 1257 aaPredicted RBP13.78□□□□□ -0.2
LRMDA-205ENST00000488759 RIMBP2O15034 1052 aa13.78□□□□□ -0.2
LRMDA-205ENST00000488759 HSP90B1P14625 803 aaKnown RBP13.78□□□□□ -0.2
LRMDA-205ENST00000488759 EPS15P42566 896 aa13.78□□□□□ -0.2
LRMDA-205ENST00000488759 CIAPIN1Q6FI81 312 aa13.78□□□□□ -0.2
LRMDA-205ENST00000488759 LRP10Q7Z4F1 713 aa13.78□□□□□ -0.2
LRMDA-205ENST00000488759 CCDC85AQ96PX6 553 aaPredicted RBP13.78□□□□□ -0.2
LRMDA-205ENST00000488759 ZNRF3Q9ULT6 936 aa13.78□□□□□ -0.2
LRMDA-205ENST00000488759 NSFL1CQ9UNZ2 370 aaKnown RBP13.78□□□□□ -0.2
LRMDA-205ENST00000488759 GMPSP49915 693 aaPredicted RBP13.77□□□□□ -0.21
LRMDA-205ENST00000488759 TNIP1Q15025 636 aa13.77□□□□□ -0.21
LRMDA-205ENST00000488759 SLC10A5Q5PT55 438 aa13.77□□□□□ -0.21
LRMDA-205ENST00000488759 CCDC30Q5VVM6 783 aa13.77□□□□□ -0.21
LRMDA-205ENST00000488759 TMC4Q7Z404 712 aa13.77□□□□□ -0.21
LRMDA-205ENST00000488759 SP8Q8IXZ3 490 aa13.77□□□□□ -0.21
LRMDA-205ENST00000488759 SNED1Q8TER0 1413 aa13.77□□□□□ -0.21
LRMDA-205ENST00000488759 CHMP4AQ9BY43 222 aa13.77□□□□□ -0.21
LRMDA-205ENST00000488759 ANKIB1Q9P2G1 1089 aa13.77□□□□□ -0.21
LRMDA-205ENST00000488759 SALL2Q9Y467 1007 aaPredicted RBP13.77□□□□□ -0.21
LRMDA-205ENST00000488759 PASKQ96RG2 1323 aa13.76□□□□□ -0.21
LRMDA-205ENST00000488759 ANP32CO43423 234 aa13.76□□□□□ -0.21
LRMDA-205ENST00000488759 SCNN1DP51172 638 aa13.76□□□□□ -0.21
LRMDA-205ENST00000488759 WASHC4Q2M389 1173 aa13.76□□□□□ -0.21
LRMDA-205ENST00000488759 USP50Q70EL3 339 aaPredicted RBP13.76□□□□□ -0.21
LRMDA-205ENST00000488759 TSR2Q969E8 191 aaKnown RBP13.76□□□□□ -0.21
LRMDA-205ENST00000488759 EYA3Q99504 573 aa13.76□□□□□ -0.21
LRMDA-205ENST00000488759 BEGAINQ9BUH8 593 aa13.76□□□□□ -0.21
LRMDA-205ENST00000488759 PHAXQ9H814 394 aaKnown RBP13.76□□□□□ -0.21
LRMDA-205ENST00000488759 DBNDD1Q9H9R9 158 aa13.76□□□□□ -0.21
LRMDA-205ENST00000488759 MRS2Q9HD23 443 aa13.76□□□□□ -0.21
LRMDA-205ENST00000488759 ADARB2Q9NS39 739 aaKnown RBP13.76□□□□□ -0.21
LRMDA-205ENST00000488759 NEXNQ0ZGT2 675 aa13.75□□□□□ -0.21
LRMDA-205ENST00000488759 DEFB115Q30KQ5 88 aa13.75□□□□□ -0.21
LRMDA-205ENST00000488759 FBXW7Q969H0 707 aa13.75□□□□□ -0.21
LRMDA-205ENST00000488759 GPRC5DQ9NZD1 345 aa13.75□□□□□ -0.21
LRMDA-205ENST00000488759 H7C1D1 291 aa13.74□□□□□ -0.21
LRMDA-205ENST00000488759 TRAF5O00463 557 aa13.74□□□□□ -0.21
LRMDA-205ENST00000488759 UFL1O94874 794 aa13.74□□□□□ -0.21
LRMDA-205ENST00000488759 VEGFBP49765 207 aa13.74□□□□□ -0.21
LRMDA-205ENST00000488759 CXCL9Q07325 125 aa13.74□□□□□ -0.21
LRMDA-205ENST00000488759 KIAA2012Q0VF49 1180 aa13.74□□□□□ -0.21
LRMDA-205ENST00000488759 CCDC152Q4G0S7 254 aa13.74□□□□□ -0.21
LRMDA-205ENST00000488759 JARID2Q92833 1246 aaPredicted RBP13.74□□□□□ -0.21
LRMDA-205ENST00000488759 CELF1Q92879 486 aaKnown RBP13.74□□□□□ -0.21
LRMDA-205ENST00000488759 GPR101Q96P66 508 aaPredicted RBP13.74□□□□□ -0.21
LRMDA-205ENST00000488759 VPS33BQ9H267 617 aa13.74□□□□□ -0.21
LRMDA-205ENST00000488759 CWC25Q9NXE8 425 aaPredicted RBP13.74□□□□□ -0.21
LRMDA-205ENST00000488759 DUOX1Q9NRD9 1551 aa13.74□□□□□ -0.21
LRMDA-205ENST00000488759 CACNA1FO60840 1977 aa13.73□□□□□ -0.21
LRMDA-205ENST00000488759 ZEB1P37275 1124 aaPredicted RBP13.73□□□□□ -0.21
LRMDA-205ENST00000488759 DOK7Q18PE1 504 aa13.73□□□□□ -0.21
LRMDA-205ENST00000488759 MICALL2Q8IY33 904 aa13.73□□□□□ -0.21
LRMDA-205ENST00000488759 ZBTB38Q8NAP3 1195 aaPredicted RBP13.73□□□□□ -0.21
LRMDA-205ENST00000488759 ISCA1Q9BUE6 129 aa13.73□□□□□ -0.21
LRMDA-205ENST00000488759 MAP3K2Q9Y2U5 619 aa13.73□□□□□ -0.21
LRMDA-205ENST00000488759 POLR2AP24928 1970 aaKnown RBP13.72□□□□□ -0.21
LRMDA-205ENST00000488759 ECE2O60344 883 aa13.72□□□□□ -0.21
LRMDA-205ENST00000488759 CELF2O95319 508 aaKnown RBP13.72□□□□□ -0.21
LRMDA-205ENST00000488759 ITGBL1O95965 494 aaPredicted RBP13.72□□□□□ -0.21
LRMDA-205ENST00000488759 ECE1P42892 770 aa13.72□□□□□ -0.21
LRMDA-205ENST00000488759 GPSM2P81274 684 aa13.72□□□□□ -0.21
LRMDA-205ENST00000488759 RBM26Q5T8P6 1007 aaKnown RBP13.72□□□□□ -0.21
LRMDA-205ENST00000488759 C8orf58Q8NAV2 365 aa13.72□□□□□ -0.21
LRMDA-205ENST00000488759 FOXN1O15353 648 aa13.71□□□□□ -0.21
LRMDA-205ENST00000488759 CTCFP49711 727 aaPredicted RBP13.71□□□□□ -0.21
LRMDA-205ENST00000488759 FMR1Q06787 632 aaKnown RBP eCLIP13.71□□□□□ -0.21
LRMDA-205ENST00000488759 ANKRD18AQ8IVF6 992 aa13.71□□□□□ -0.21
LRMDA-205ENST00000488759 RTFDC1Q9BY42 306 aaPredicted RBP13.71□□□□□ -0.21
LRMDA-205ENST00000488759 ZC3H12CQ9C0D7 883 aaKnown RBP13.71□□□□□ -0.21
LRMDA-205ENST00000488759 CNOT7Q9UIV1 285 aaKnown RBP13.71□□□□□ -0.21
LRMDA-205ENST00000488759 GGA1Q9UJY5 639 aa13.71□□□□□ -0.21
LRMDA-205ENST00000488759 ZBTB12Q9Y330 459 aaPredicted RBP13.71□□□□□ -0.21
LRMDA-205ENST00000488759 CDHR2Q9BYE9 1310 aa13.7□□□□□ -0.22
LRMDA-205ENST00000488759 WDR33Q9C0J8 1336 aaKnown RBP13.7□□□□□ -0.22
LRMDA-205ENST00000488759 COL4A1P02462 1669 aa13.7□□□□□ -0.22
LRMDA-205ENST00000488759 PCNTO95613 3336 aa13.7□□□□□ -0.22
LRMDA-205ENST00000488759 PSMD14O00487 310 aa13.7□□□□□ -0.22
LRMDA-205ENST00000488759 PDE8AO60658 829 aa13.7□□□□□ -0.22
LRMDA-205ENST00000488759 RPS8P62241 208 aaKnown RBP13.7□□□□□ -0.22
LRMDA-205ENST00000488759 TWISTNBQ3B726 338 aaPredicted RBP13.7□□□□□ -0.22
LRMDA-205ENST00000488759 TBC1D10BQ4KMP7 808 aaPredicted RBP13.7□□□□□ -0.22
LRMDA-205ENST00000488759 CCDC191Q8NCU4 936 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms