RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 HSP90B1P14625 803 aaKnown RBP20.36■□□□□ 0.85
CTDSP1-209ENST00000488627 GCKRQ14397 625 aa20.36■□□□□ 0.85
CTDSP1-209ENST00000488627 LINS1Q8NG48 757 aa20.36■□□□□ 0.85
CTDSP1-209ENST00000488627 IARSP41252 1262 aaKnown RBP20.35■□□□□ 0.85
CTDSP1-209ENST00000488627 CASP7P55210 303 aa20.35■□□□□ 0.85
CTDSP1-209ENST00000488627 BEND3Q5T5X7 828 aa20.35■□□□□ 0.85
CTDSP1-209ENST00000488627 MRPL50Q8N5N7 158 aaKnown RBP20.35■□□□□ 0.85
CTDSP1-209ENST00000488627 SSH1Q8WYL5 1049 aa20.34■□□□□ 0.85
CTDSP1-209ENST00000488627 RTFDC1Q9BY42 306 aaPredicted RBP20.34■□□□□ 0.85
CTDSP1-209ENST00000488627 RRAGCQ9HB90 399 aa20.34■□□□□ 0.85
CTDSP1-209ENST00000488627 SEC31BQ9NQW1 1179 aa20.34■□□□□ 0.85
CTDSP1-209ENST00000488627 TMC4Q7Z404 712 aa20.33■□□□□ 0.85
CTDSP1-209ENST00000488627 POTECB2RU33 542 aa20.32■□□□□ 0.84
CTDSP1-209ENST00000488627 RPS8P62241 208 aaKnown RBP20.32■□□□□ 0.84
CTDSP1-209ENST00000488627 DPY19L2Q6NUT2 758 aa20.32■□□□□ 0.84
CTDSP1-209ENST00000488627 UBE3BQ7Z3V4 1068 aa20.32■□□□□ 0.84
CTDSP1-209ENST00000488627 TTLL11Q8NHH1 800 aa20.32■□□□□ 0.84
CTDSP1-209ENST00000488627 DDX60Q8IY21 1712 aaKnown RBP20.32■□□□□ 0.84
CTDSP1-209ENST00000488627 CACNA1SQ13698 1873 aa20.31■□□□□ 0.84
CTDSP1-209ENST00000488627 FZD9O00144 591 aa20.31■□□□□ 0.84
CTDSP1-209ENST00000488627 CTSWP56202 376 aa20.31■□□□□ 0.84
CTDSP1-209ENST00000488627 CCDC152Q4G0S7 254 aa20.31■□□□□ 0.84
CTDSP1-209ENST00000488627 MPNDQ8N594 471 aa20.31■□□□□ 0.84
CTDSP1-209ENST00000488627 PLA2G12BQ9BX93 195 aa20.31■□□□□ 0.84
CTDSP1-209ENST00000488627 TMX4Q9H1E5 349 aaPredicted RBP20.31■□□□□ 0.84
CTDSP1-209ENST00000488627 COL4A1P02462 1669 aa20.31■□□□□ 0.84
CTDSP1-209ENST00000488627 DDNO94850 711 aaPredicted RBP20.3■□□□□ 0.84
CTDSP1-209ENST00000488627 CCDC85AQ96PX6 553 aaPredicted RBP20.3■□□□□ 0.84
CTDSP1-209ENST00000488627 LAMB2P55268 1798 aa20.29■□□□□ 0.84
CTDSP1-209ENST00000488627 TOMM70O94826 608 aa20.29■□□□□ 0.84
CTDSP1-209ENST00000488627 CT47B1P0C2W7 299 aaPredicted RBP20.29■□□□□ 0.84
CTDSP1-209ENST00000488627 ALDH1L2Q3SY69 923 aa20.29■□□□□ 0.84
CTDSP1-209ENST00000488627 DPP8Q6V1X1 898 aaPredicted RBP20.29■□□□□ 0.84
CTDSP1-209ENST00000488627 VPS33BQ9H267 617 aa20.29■□□□□ 0.84
CTDSP1-209ENST00000488627 ZNF541Q9H0D2 1346 aa20.28■□□□□ 0.84
CTDSP1-209ENST00000488627 VEGFAP15692 232 aaPredicted RBP20.28■□□□□ 0.84
CTDSP1-209ENST00000488627 BCL2L13Q9BXK5 485 aa20.28■□□□□ 0.84
CTDSP1-209ENST00000488627 COL4A5P29400 1685 aa20.28■□□□□ 0.84
CTDSP1-209ENST00000488627 CSF1RP07333 972 aa20.27■□□□□ 0.84
CTDSP1-209ENST00000488627 AOC3Q16853 763 aa20.27■□□□□ 0.84
CTDSP1-209ENST00000488627 LARGE2Q8N3Y3 721 aa20.27■□□□□ 0.84
CTDSP1-209ENST00000488627 SUPT20HQ8NEM7 779 aa20.27■□□□□ 0.84
CTDSP1-209ENST00000488627 JDP2Q8WYK2 163 aa20.27■□□□□ 0.84
CTDSP1-209ENST00000488627 GREM2Q9H772 168 aa20.27■□□□□ 0.84
CTDSP1-209ENST00000488627 PPIP5K2O43314 1243 aa20.26■□□□□ 0.83
CTDSP1-209ENST00000488627 ALDH1L1O75891 902 aa20.26■□□□□ 0.83
CTDSP1-209ENST00000488627 GPSM2P81274 684 aa20.26■□□□□ 0.83
CTDSP1-209ENST00000488627 HNRNPUQ00839 825 aaKnown RBP eCLIP20.26■□□□□ 0.83
CTDSP1-209ENST00000488627 L3MBTL3Q96JM7 780 aaPredicted RBP20.26■□□□□ 0.83
CTDSP1-209ENST00000488627 CACNA1FO60840 1977 aa20.26■□□□□ 0.83
CTDSP1-209ENST00000488627 PTPRCP08575 1304 aa20.26■□□□□ 0.83
CTDSP1-209ENST00000488627 RTL9Q8NET4 1388 aa20.25■□□□□ 0.83
CTDSP1-209ENST00000488627 CCDC88AQ3V6T2 1871 aa20.25■□□□□ 0.83
CTDSP1-209ENST00000488627 BRPF1P55201 1214 aaPredicted RBP20.25■□□□□ 0.83
CTDSP1-209ENST00000488627 FOXO4P98177 505 aa20.25■□□□□ 0.83
CTDSP1-209ENST00000488627 KIAA2012Q0VF49 1180 aa20.25■□□□□ 0.83
CTDSP1-209ENST00000488627 SLC4A10Q6U841 1118 aa20.25■□□□□ 0.83
CTDSP1-209ENST00000488627 POLLQ9UGP5 575 aa20.25■□□□□ 0.83
CTDSP1-209ENST00000488627 NSFL1CQ9UNZ2 370 aaKnown RBP20.25■□□□□ 0.83
CTDSP1-209ENST00000488627 GRM8O00222 908 aa20.24■□□□□ 0.83
CTDSP1-209ENST00000488627 ANKRD18AQ8IVF6 992 aa20.24■□□□□ 0.83
CTDSP1-209ENST00000488627 RBM46Q8TBY0 533 aaKnown RBP20.24■□□□□ 0.83
CTDSP1-209ENST00000488627 SRCIN1Q9C0H9 1055 aa20.24■□□□□ 0.83
CTDSP1-209ENST00000488627 SMC4Q9NTJ3 1288 aa20.24■□□□□ 0.83
CTDSP1-209ENST00000488627 PODXL2Q9NZ53 605 aa20.24■□□□□ 0.83
CTDSP1-209ENST00000488627 DICER1Q9UPY3 1922 aaKnown RBP20.23■□□□□ 0.83
CTDSP1-209ENST00000488627 TAF1P21675 1872 aa20.23■□□□□ 0.83
CTDSP1-209ENST00000488627 TIAM2Q8IVF5 1701 aa20.23■□□□□ 0.83
CTDSP1-209ENST00000488627 NIM1KQ8IY84 436 aa20.23■□□□□ 0.83
CTDSP1-209ENST00000488627 CDC5LQ99459 802 aaKnown RBP20.23■□□□□ 0.83
CTDSP1-209ENST00000488627 RARSP54136 660 aaKnown RBP20.22■□□□□ 0.83
CTDSP1-209ENST00000488627 EPHA10Q5JZY3 1008 aa20.22■□□□□ 0.83
CTDSP1-209ENST00000488627 TBC1D16Q8TBP0 767 aa20.22■□□□□ 0.83
CTDSP1-209ENST00000488627 BSDC1Q9NW68 430 aaPredicted RBP20.22■□□□□ 0.83
CTDSP1-209ENST00000488627 DUOX1Q9NRD9 1551 aa20.21■□□□□ 0.83
CTDSP1-209ENST00000488627 EIF6P56537 245 aaKnown RBP20.21■□□□□ 0.83
CTDSP1-209ENST00000488627 FAM161AQ3B820 660 aa20.21■□□□□ 0.83
CTDSP1-209ENST00000488627 C16orf71Q8IYS4 520 aaPredicted RBP20.21■□□□□ 0.83
CTDSP1-209ENST00000488627 GPC2Q8N158 579 aa20.21■□□□□ 0.83
CTDSP1-209ENST00000488627 ZNRF3Q9ULT6 936 aa20.21■□□□□ 0.83
CTDSP1-209ENST00000488627 WDR90Q96KV7 1748 aa20.21■□□□□ 0.83
CTDSP1-209ENST00000488627 UTYO14607 1347 aa20.21■□□□□ 0.83
CTDSP1-209ENST00000488627 NBPF7P0C2Y1 421 aaPredicted RBP20.2■□□□□ 0.82
CTDSP1-209ENST00000488627 ITGA6P23229 1130 aa20.2■□□□□ 0.82
CTDSP1-209ENST00000488627 CXCL9Q07325 125 aa20.2■□□□□ 0.82
CTDSP1-209ENST00000488627 KAZALD1Q96I82 304 aa20.2■□□□□ 0.82
CTDSP1-209ENST00000488627 C9orf78Q9NZ63 289 aaPredicted RBP20.2■□□□□ 0.82
CTDSP1-209ENST00000488627 MINPP1Q9UNW1 487 aa20.2■□□□□ 0.82
CTDSP1-209ENST00000488627 LRRC37AA6NMS7 1700 aa20.19■□□□□ 0.82
CTDSP1-209ENST00000488627 YDJCA8MPS7 323 aa20.19■□□□□ 0.82
CTDSP1-209ENST00000488627 C6orf229H3BNL8 230 aa20.19■□□□□ 0.82
CTDSP1-209ENST00000488627 WASHC4Q2M389 1173 aa20.19■□□□□ 0.82
CTDSP1-209ENST00000488627 TAF1DQ9H5J8 278 aaPredicted RBP20.19■□□□□ 0.82
CTDSP1-209ENST00000488627 NOB1Q9ULX3 412 aaKnown RBP20.19■□□□□ 0.82
CTDSP1-209ENST00000488627 WTIPA6NIX2 430 aaPredicted RBP20.18■□□□□ 0.82
CTDSP1-209ENST00000488627 FSTL1Q12841 308 aa20.18■□□□□ 0.82
CTDSP1-209ENST00000488627 LMBR1LQ6UX01 489 aa20.18■□□□□ 0.82
CTDSP1-209ENST00000488627 GPR101Q96P66 508 aaPredicted RBP20.18■□□□□ 0.82
CTDSP1-209ENST00000488627 ANKIB1Q9P2G1 1089 aa20.18■□□□□ 0.82
CTDSP1-209ENST00000488627 IQCA1LA6NCM1 817 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms