RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 RTL5Q5HYW3 569 aaPredicted RBP13.72□□□□□ -0.21
HDLBP-242ENST00000488013 LMBR1LQ6UX01 489 aa13.72□□□□□ -0.21
HDLBP-242ENST00000488013 KAZALD1Q96I82 304 aa13.72□□□□□ -0.21
HDLBP-242ENST00000488013 BRIP1Q9BX63 1249 aa13.72□□□□□ -0.21
HDLBP-242ENST00000488013 ZBTB47Q9UFB7 747 aaPredicted RBP13.72□□□□□ -0.21
HDLBP-242ENST00000488013 RIC1Q4ADV7 1423 aa13.72□□□□□ -0.21
HDLBP-242ENST00000488013 RTL9Q8NET4 1388 aa13.71□□□□□ -0.21
HDLBP-242ENST00000488013 PDE6BP35913 854 aa13.71□□□□□ -0.21
HDLBP-242ENST00000488013 DDR1Q08345 913 aa13.71□□□□□ -0.21
HDLBP-242ENST00000488013 PRR5LQ6MZQ0 368 aa13.71□□□□□ -0.21
HDLBP-242ENST00000488013 NUTM1Q86Y26 1132 aa13.71□□□□□ -0.21
HDLBP-242ENST00000488013 ERC1Q8IUD2 1116 aa13.71□□□□□ -0.21
HDLBP-242ENST00000488013 TTLL11Q8NHH1 800 aa13.71□□□□□ -0.21
HDLBP-242ENST00000488013 DCTPP1Q9H773 170 aa13.71□□□□□ -0.21
HDLBP-242ENST00000488013 SCN7AQ01118 1682 aa13.71□□□□□ -0.21
HDLBP-242ENST00000488013 UBR3Q6ZT12 1888 aa13.71□□□□□ -0.21
HDLBP-242ENST00000488013 ANKRD18BA2A2Z9 1011 aa13.7□□□□□ -0.22
HDLBP-242ENST00000488013 RAB11FIP3O75154 756 aa13.7□□□□□ -0.22
HDLBP-242ENST00000488013 HCLS1P14317 486 aaPredicted RBP13.7□□□□□ -0.22
HDLBP-242ENST00000488013 TAF7LQ5H9L4 462 aa13.7□□□□□ -0.22
HDLBP-242ENST00000488013 CDC5LQ99459 802 aaKnown RBP13.7□□□□□ -0.22
HDLBP-242ENST00000488013 COPRSQ9NQ92 184 aa13.7□□□□□ -0.22
HDLBP-242ENST00000488013 NOP58Q9Y2X3 529 aaKnown RBP13.7□□□□□ -0.22
HDLBP-242ENST00000488013 CHMP3Q9Y3E7 222 aa13.7□□□□□ -0.22
HDLBP-242ENST00000488013 ARFGEF2Q9Y6D5 1785 aa13.7□□□□□ -0.22
HDLBP-242ENST00000488013 NUP188Q5SRE5 1749 aa13.7□□□□□ -0.22
HDLBP-242ENST00000488013 KLRG2A4D1S0 409 aaPredicted RBP13.69□□□□□ -0.22
HDLBP-242ENST00000488013 EPHA10Q5JZY3 1008 aa13.69□□□□□ -0.22
HDLBP-242ENST00000488013 MSL1Q68DK7 614 aa13.69□□□□□ -0.22
HDLBP-242ENST00000488013 SIRT2Q8IXJ6 389 aa13.69□□□□□ -0.22
HDLBP-242ENST00000488013 JARID2Q92833 1246 aaPredicted RBP13.69□□□□□ -0.22
HDLBP-242ENST00000488013 PNMA6EA0A0J9YXQ4 647 aa13.68□□□□□ -0.22
HDLBP-242ENST00000488013 SURF6O75683 361 aaKnown RBP13.68□□□□□ -0.22
HDLBP-242ENST00000488013 CIAO1O76071 339 aa13.68□□□□□ -0.22
HDLBP-242ENST00000488013 G3BP1Q13283 466 aaKnown RBP eCLIP13.68□□□□□ -0.229e-7■□□□□ 8
HDLBP-242ENST00000488013 CRY2Q49AN0 593 aa13.68□□□□□ -0.22
HDLBP-242ENST00000488013 B4GALNT3Q6L9W6 998 aa13.68□□□□□ -0.22
HDLBP-242ENST00000488013 DDX46Q7L014 1031 aaKnown RBP13.68□□□□□ -0.22
HDLBP-242ENST00000488013 SMC5Q8IY18 1101 aa13.68□□□□□ -0.22
HDLBP-242ENST00000488013 BCORQ6W2J9 1755 aa13.68□□□□□ -0.22
HDLBP-242ENST00000488013 ITGA6P23229 1130 aa13.67□□□□□ -0.22
HDLBP-242ENST00000488013 IGHMBP2P38935 993 aaKnown RBP13.67□□□□□ -0.22
HDLBP-242ENST00000488013 OS9Q13438 667 aaPredicted RBP13.67□□□□□ -0.22
HDLBP-242ENST00000488013 TMC4Q7Z404 712 aa13.67□□□□□ -0.22
HDLBP-242ENST00000488013 SYNE4Q8N205 404 aa13.67□□□□□ -0.22
HDLBP-242ENST00000488013 RPGRQ92834 1020 aaKnown RBP13.67□□□□□ -0.22
HDLBP-242ENST00000488013 RBM17Q96I25 401 aaKnown RBP13.67□□□□□ -0.22
HDLBP-242ENST00000488013 N4BP2Q86UW6 1770 aaPredicted RBP13.67□□□□□ -0.22
HDLBP-242ENST00000488013 ZBTB7AO95365 584 aa13.66□□□□□ -0.22
HDLBP-242ENST00000488013 ALDH1B1P30837 517 aa13.66□□□□□ -0.22
HDLBP-242ENST00000488013 HOXA10P31260 410 aaPredicted RBP13.66□□□□□ -0.22
HDLBP-242ENST00000488013 IL15P40933 162 aaPredicted RBP13.66□□□□□ -0.22
HDLBP-242ENST00000488013 FAM161AQ3B820 660 aa13.66□□□□□ -0.22
HDLBP-242ENST00000488013 KIF1BPQ96EK5 621 aa13.66□□□□□ -0.22
HDLBP-242ENST00000488013 MPHOSPH8Q99549 860 aa13.66□□□□□ -0.22
HDLBP-242ENST00000488013 GREM2Q9H772 168 aa13.66□□□□□ -0.22
HDLBP-242ENST00000488013 SPON1Q9HCB6 807 aa13.66□□□□□ -0.22
HDLBP-242ENST00000488013 QSER1Q2KHR3 1735 aa13.66□□□□□ -0.22
HDLBP-242ENST00000488013 ABCC12Q96J65 1359 aa13.66□□□□□ -0.22
HDLBP-242ENST00000488013 KDM2BQ8NHM5 1336 aa13.65□□□□□ -0.22
HDLBP-242ENST00000488013 H0YIN7 160 aa13.65□□□□□ -0.22
HDLBP-242ENST00000488013 EYA2O00167 538 aa13.65□□□□□ -0.22
HDLBP-242ENST00000488013 BBOX1O75936 387 aa13.65□□□□□ -0.22
HDLBP-242ENST00000488013 IGHDP01880 384 aa13.65□□□□□ -0.22
HDLBP-242ENST00000488013 NPR1P16066 1061 aa13.65□□□□□ -0.22
HDLBP-242ENST00000488013 RFX5P48382 616 aaPredicted RBP13.65□□□□□ -0.22
HDLBP-242ENST00000488013 PTPN12Q05209 780 aaKnown RBP13.65□□□□□ -0.22
HDLBP-242ENST00000488013 ANKRD18AQ8IVF6 992 aa13.65□□□□□ -0.22
HDLBP-242ENST00000488013 CRAMP1Q96RY5 1269 aa13.65□□□□□ -0.22
HDLBP-242ENST00000488013 TMX4Q9H1E5 349 aaPredicted RBP13.65□□□□□ -0.22
HDLBP-242ENST00000488013 C4AP0C0L4 1744 aa13.64□□□□□ -0.23
HDLBP-242ENST00000488013 RPS8P62241 208 aaKnown RBP13.64□□□□□ -0.23
HDLBP-242ENST00000488013 LDHAL6AQ6ZMR3 332 aa13.64□□□□□ -0.23
HDLBP-242ENST00000488013 MASTLQ96GX5 879 aa13.64□□□□□ -0.23
HDLBP-242ENST00000488013 LRRCC1Q9C099 1032 aa13.64□□□□□ -0.23
HDLBP-242ENST00000488013 PDGFDQ9GZP0 370 aaPredicted RBP13.64□□□□□ -0.23
HDLBP-242ENST00000488013 MROH5Q6ZUA9 1318 aa13.64□□□□□ -0.23
HDLBP-242ENST00000488013 NUP98P52948 1817 aa13.63□□□□□ -0.23
HDLBP-242ENST00000488013 PSDA5PKW4 1024 aaPredicted RBP13.63□□□□□ -0.23
HDLBP-242ENST00000488013 SRGNP10124 158 aa13.63□□□□□ -0.23
HDLBP-242ENST00000488013 TGFB2P61812 414 aa13.63□□□□□ -0.23
HDLBP-242ENST00000488013 NUCB1Q02818 461 aa13.63□□□□□ -0.23
HDLBP-242ENST00000488013 GRAPQ13588 217 aa13.63□□□□□ -0.23
HDLBP-242ENST00000488013 STYK1Q6J9G0 422 aa13.63□□□□□ -0.23
HDLBP-242ENST00000488013 GRAPLQ8TC17 118 aaPredicted RBP13.63□□□□□ -0.23
HDLBP-242ENST00000488013 CNNM1Q9NRU3 951 aa13.63□□□□□ -0.23
HDLBP-242ENST00000488013 BSDC1Q9NW68 430 aaPredicted RBP13.63□□□□□ -0.23
HDLBP-242ENST00000488013 AKAP2Q9Y2D5 859 aa13.63□□□□□ -0.23
HDLBP-242ENST00000488013 CD2APQ9Y5K6 639 aa13.63□□□□□ -0.23
HDLBP-242ENST00000488013 GRIPAP1Q4V328 841 aa13.62□□□□□ -0.23
HDLBP-242ENST00000488013 ANKRD45Q5TZF3 282 aa13.62□□□□□ -0.23
HDLBP-242ENST00000488013 CLASRPQ8N2M8 674 aaKnown RBP13.62□□□□□ -0.23
HDLBP-242ENST00000488013 CNKSR1Q969H4 720 aa13.62□□□□□ -0.23
HDLBP-242ENST00000488013 CCDC85AQ96PX6 553 aaPredicted RBP13.62□□□□□ -0.23
HDLBP-242ENST00000488013 GPR108Q9NPR9 543 aa13.62□□□□□ -0.23
HDLBP-242ENST00000488013 CEP126Q9P2H0 1117 aa13.62□□□□□ -0.23
HDLBP-242ENST00000488013 EXOC6BQ9Y2D4 811 aa13.62□□□□□ -0.23
HDLBP-242ENST00000488013 ANKRD36CQ5JPF3 1778 aa13.62□□□□□ -0.23
HDLBP-242ENST00000488013 COL24A1Q17RW2 1714 aa13.61□□□□□ -0.23
HDLBP-242ENST00000488013 CHD1LQ86WJ1 897 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms