RNA–Protein interactions for RNA: ENST00000487989.1

PFKFB3-213, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, humanhuman

TSL 2

Gene PFKFB3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB3-213ENST00000487989 PSMD1Q99460 953 aa18.03■□□□□ 0.48
PFKFB3-213ENST00000487989 KDM2BQ8NHM5 1336 aa18.02■□□□□ 0.48
PFKFB3-213ENST00000487989 H7C1W4 665 aa18.02■□□□□ 0.48
PFKFB3-213ENST00000487989 UBE3BQ7Z3V4 1068 aa18.02■□□□□ 0.48
PFKFB3-213ENST00000487989 SP8Q8IXZ3 490 aa18.02■□□□□ 0.48
PFKFB3-213ENST00000487989 SSH1Q8WYL5 1049 aa18.02■□□□□ 0.48
PFKFB3-213ENST00000487989 SNED1Q8TER0 1413 aa18.01■□□□□ 0.47
PFKFB3-213ENST00000487989 CCDC152Q4G0S7 254 aa18.01■□□□□ 0.47
PFKFB3-213ENST00000487989 BEND3Q5T5X7 828 aa18.01■□□□□ 0.47
PFKFB3-213ENST00000487989 CELF1Q92879 486 aaKnown RBP18.01■□□□□ 0.47
PFKFB3-213ENST00000487989 NMRK2Q9NPI5 230 aa18.01■□□□□ 0.47
PFKFB3-213ENST00000487989 GLTPD2A6NH11 291 aa18■□□□□ 0.47
PFKFB3-213ENST00000487989 CT47B1P0C2W7 299 aaPredicted RBP18■□□□□ 0.47
PFKFB3-213ENST00000487989 IARSP41252 1262 aaKnown RBP18■□□□□ 0.47
PFKFB3-213ENST00000487989 ALDH1L2Q3SY69 923 aa18■□□□□ 0.47
PFKFB3-213ENST00000487989 DPY19L2Q6NUT2 758 aa18■□□□□ 0.47
PFKFB3-213ENST00000487989 SLC4A10Q6U841 1118 aa18■□□□□ 0.47
PFKFB3-213ENST00000487989 TMC4Q7Z404 712 aa18■□□□□ 0.47
PFKFB3-213ENST00000487989 CCDC85AQ96PX6 553 aaPredicted RBP18■□□□□ 0.47
PFKFB3-213ENST00000487989 BCL2L13Q9BXK5 485 aa18■□□□□ 0.47
PFKFB3-213ENST00000487989 CCDC88AQ3V6T2 1871 aa18■□□□□ 0.47
PFKFB3-213ENST00000487989 CTSWP56202 376 aa17.99■□□□□ 0.47
PFKFB3-213ENST00000487989 RPS8P62241 208 aaKnown RBP17.99■□□□□ 0.47
PFKFB3-213ENST00000487989 DPP8Q6V1X1 898 aaPredicted RBP17.99■□□□□ 0.47
PFKFB3-213ENST00000487989 MPNDQ8N594 471 aa17.99■□□□□ 0.47
PFKFB3-213ENST00000487989 SEC31BQ9NQW1 1179 aa17.99■□□□□ 0.47
PFKFB3-213ENST00000487989 TIAM2Q8IVF5 1701 aa17.98■□□□□ 0.47
PFKFB3-213ENST00000487989 KIF3CO14782 793 aa17.98■□□□□ 0.47
PFKFB3-213ENST00000487989 RRAGCQ9HB90 399 aa17.98■□□□□ 0.47
PFKFB3-213ENST00000487989 SMC4Q9NTJ3 1288 aa17.98■□□□□ 0.47
PFKFB3-213ENST00000487989 PTPRCP08575 1304 aa17.98■□□□□ 0.47
PFKFB3-213ENST00000487989 CASP7P55210 303 aa17.97■□□□□ 0.47
PFKFB3-213ENST00000487989 C1QTNF8P60827 252 aa17.97■□□□□ 0.47
PFKFB3-213ENST00000487989 SUPT20HQ8NEM7 779 aa17.97■□□□□ 0.47
PFKFB3-213ENST00000487989 TTLL11Q8NHH1 800 aa17.97■□□□□ 0.47
PFKFB3-213ENST00000487989 JDP2Q8WYK2 163 aa17.97■□□□□ 0.47
PFKFB3-213ENST00000487989 ALDH1L1O75891 902 aa17.96■□□□□ 0.47
PFKFB3-213ENST00000487989 LARGE2Q8N3Y3 721 aa17.96■□□□□ 0.47
PFKFB3-213ENST00000487989 RTFDC1Q9BY42 306 aaPredicted RBP17.96■□□□□ 0.47
PFKFB3-213ENST00000487989 SRCIN1Q9C0H9 1055 aa17.96■□□□□ 0.47
PFKFB3-213ENST00000487989 TAF1P21675 1872 aa17.96■□□□□ 0.47
PFKFB3-213ENST00000487989 DICER1Q9UPY3 1922 aaKnown RBP17.96■□□□□ 0.47
PFKFB3-213ENST00000487989 PLA2G12BQ9BX93 195 aa17.95■□□□□ 0.46
PFKFB3-213ENST00000487989 VPS33BQ9H267 617 aa17.95■□□□□ 0.46
PFKFB3-213ENST00000487989 GREM2Q9H772 168 aa17.95■□□□□ 0.46
PFKFB3-213ENST00000487989 C9orf78Q9NZ63 289 aaPredicted RBP17.95■□□□□ 0.46
PFKFB3-213ENST00000487989 NSFL1CQ9UNZ2 370 aaKnown RBP17.95■□□□□ 0.46
PFKFB3-213ENST00000487989 COL4A1P02462 1669 aa17.94■□□□□ 0.46
PFKFB3-213ENST00000487989 GRM8O00222 908 aa17.94■□□□□ 0.46
PFKFB3-213ENST00000487989 PPIP5K2O43314 1243 aa17.94■□□□□ 0.46
PFKFB3-213ENST00000487989 DDNO94850 711 aaPredicted RBP17.94■□□□□ 0.46
PFKFB3-213ENST00000487989 AOC3Q16853 763 aa17.94■□□□□ 0.46
PFKFB3-213ENST00000487989 ANKRD18AQ8IVF6 992 aa17.94■□□□□ 0.46
PFKFB3-213ENST00000487989 C16orf71Q8IYS4 520 aaPredicted RBP17.94■□□□□ 0.46
PFKFB3-213ENST00000487989 FZD9O00144 591 aa17.93■□□□□ 0.46
PFKFB3-213ENST00000487989 VEGFAP15692 232 aaPredicted RBP17.93■□□□□ 0.46
PFKFB3-213ENST00000487989 RARSP54136 660 aaKnown RBP17.93■□□□□ 0.46
PFKFB3-213ENST00000487989 GPSM2P81274 684 aa17.93■□□□□ 0.46
PFKFB3-213ENST00000487989 CDC5LQ99459 802 aaKnown RBP17.93■□□□□ 0.46
PFKFB3-213ENST00000487989 CSF1RP07333 972 aa17.92■□□□□ 0.46
PFKFB3-213ENST00000487989 NIM1KQ8IY84 436 aa17.92■□□□□ 0.46
PFKFB3-213ENST00000487989 NOB1Q9ULX3 412 aaKnown RBP17.92■□□□□ 0.46
PFKFB3-213ENST00000487989 ZNF541Q9H0D2 1346 aa17.92■□□□□ 0.46
PFKFB3-213ENST00000487989 RTL9Q8NET4 1388 aa17.91■□□□□ 0.46
PFKFB3-213ENST00000487989 C6orf229H3BNL8 230 aa17.91■□□□□ 0.46
PFKFB3-213ENST00000487989 TOMM70O94826 608 aa17.91■□□□□ 0.46
PFKFB3-213ENST00000487989 BRPF1P55201 1214 aaPredicted RBP17.91■□□□□ 0.46
PFKFB3-213ENST00000487989 EIF6P56537 245 aaKnown RBP17.91■□□□□ 0.46
PFKFB3-213ENST00000487989 ANKIB1Q9P2G1 1089 aa17.91■□□□□ 0.46
PFKFB3-213ENST00000487989 ZBED9Q6R2W3 1325 aa17.91■□□□□ 0.46
PFKFB3-213ENST00000487989 COL4A5P29400 1685 aa17.9■□□□□ 0.46
PFKFB3-213ENST00000487989 LRRC37AA6NMS7 1700 aa17.9■□□□□ 0.46
PFKFB3-213ENST00000487989 POTECB2RU33 542 aa17.9■□□□□ 0.46
PFKFB3-213ENST00000487989 ITGA6P23229 1130 aa17.9■□□□□ 0.46
PFKFB3-213ENST00000487989 FOXO4P98177 505 aa17.9■□□□□ 0.46
PFKFB3-213ENST00000487989 KIAA2012Q0VF49 1180 aa17.9■□□□□ 0.46
PFKFB3-213ENST00000487989 WASHC4Q2M389 1173 aa17.9■□□□□ 0.46
PFKFB3-213ENST00000487989 FAM161AQ3B820 660 aa17.9■□□□□ 0.46
PFKFB3-213ENST00000487989 POLLQ9UGP5 575 aa17.9■□□□□ 0.46
PFKFB3-213ENST00000487989 IGHMBP2P38935 993 aaKnown RBP17.89■□□□□ 0.45
PFKFB3-213ENST00000487989 EPHA10Q5JZY3 1008 aa17.89■□□□□ 0.45
PFKFB3-213ENST00000487989 TBC1D16Q8TBP0 767 aa17.89■□□□□ 0.45
PFKFB3-213ENST00000487989 BSDC1Q9NW68 430 aaPredicted RBP17.89■□□□□ 0.45
PFKFB3-213ENST00000487989 PODXL2Q9NZ53 605 aa17.89■□□□□ 0.45
PFKFB3-213ENST00000487989 ZNRF3Q9ULT6 936 aa17.89■□□□□ 0.45
PFKFB3-213ENST00000487989 CHMP3Q9Y3E7 222 aa17.89■□□□□ 0.45
PFKFB3-213ENST00000487989 RIMBP2O15034 1052 aa17.88■□□□□ 0.45
PFKFB3-213ENST00000487989 NBPF7P0C2Y1 421 aaPredicted RBP17.88■□□□□ 0.45
PFKFB3-213ENST00000487989 LMBR1LQ6UX01 489 aa17.88■□□□□ 0.45
PFKFB3-213ENST00000487989 GPC2Q8N158 579 aa17.88■□□□□ 0.45
PFKFB3-213ENST00000487989 EYA3Q99504 573 aa17.88■□□□□ 0.45
PFKFB3-213ENST00000487989 API5Q9BZZ5 524 aaKnown RBP17.88■□□□□ 0.45
PFKFB3-213ENST00000487989 GJA3Q9Y6H8 435 aa17.88■□□□□ 0.45
PFKFB3-213ENST00000487989 MYH3P11055 1940 aa17.88■□□□□ 0.45
PFKFB3-213ENST00000487989 DUOX1Q9NRD9 1551 aa17.87■□□□□ 0.45
PFKFB3-213ENST00000487989 WDR90Q96KV7 1748 aa17.87■□□□□ 0.45
PFKFB3-213ENST00000487989 ANKRD18BA2A2Z9 1011 aa17.87■□□□□ 0.45
PFKFB3-213ENST00000487989 UFL1O94874 794 aa17.87■□□□□ 0.45
PFKFB3-213ENST00000487989 IFIT5Q13325 482 aaKnown RBP17.87■□□□□ 0.45
PFKFB3-213ENST00000487989 RBM46Q8TBY0 533 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms