RNA–Protein interactions for RNA: ENST00000487791.1

HBA1-204, Transcript of hemoglobin subunit alpha 1, humanhuman

TSL 1 (best)

Gene HBA1, Length 410 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HBA1-204ENST00000487791 DDX60Q8IY21 1712 aaKnown RBP28.81■■■□□ 2.2
HBA1-204ENST00000487791 GRIN3BO60391 1043 aa28.81■■■□□ 2.2
HBA1-204ENST00000487791 BBOX1O75936 387 aa28.81■■■□□ 2.2
HBA1-204ENST00000487791 TMC4Q7Z404 712 aa28.81■■■□□ 2.2
HBA1-204ENST00000487791 DLEC1Q9Y238 1755 aa28.8■■■□□ 2.2
HBA1-204ENST00000487791 CDC5LQ99459 802 aaKnown RBP28.8■■■□□ 2.2
HBA1-204ENST00000487791 TNRC6CQ9HCJ0 1690 aaKnown RBP28.8■■■□□ 2.2
HBA1-204ENST00000487791 PLIN1O60240 522 aa28.79■■■□□ 2.2
HBA1-204ENST00000487791 RRP1P56182 461 aaKnown RBP28.79■■■□□ 2.2
HBA1-204ENST00000487791 TTLL11Q8NHH1 800 aa28.79■■■□□ 2.2
HBA1-204ENST00000487791 DDX19BQ9UMR2 479 aa28.79■■■□□ 2.2
HBA1-204ENST00000487791 SRCAPQ6ZRS2 3230 aa28.79■■■□□ 2.2
HBA1-204ENST00000487791 KIAA1551Q9HCM1 1747 aa28.79■■■□□ 2.2
HBA1-204ENST00000487791 GRIPAP1Q4V328 841 aa28.78■■■□□ 2.2
HBA1-204ENST00000487791 PRPF40BQ6NWY9 871 aaKnown RBP28.78■■■□□ 2.2
HBA1-204ENST00000487791 C3orf67Q6ZVT6 689 aa28.78■■■□□ 2.2
HBA1-204ENST00000487791 PANK1Q8TE04 598 aa28.78■■■□□ 2.2
HBA1-204ENST00000487791 CHMP3Q9Y3E7 222 aa28.78■■■□□ 2.2
HBA1-204ENST00000487791 MYH3P11055 1940 aa28.78■■■□□ 2.2
HBA1-204ENST00000487791 GRAPQ13588 217 aa28.77■■■□□ 2.2
HBA1-204ENST00000487791 CC2D2BQ6DHV5 1058 aa28.77■■■□□ 2.2
HBA1-204ENST00000487791 GRAPLQ8TC17 118 aaPredicted RBP28.77■■■□□ 2.2
HBA1-204ENST00000487791 TNNQ9UQP3 1299 aa28.77■■■□□ 2.2
HBA1-204ENST00000487791 RTL9Q8NET4 1388 aa28.76■■■□□ 2.2
HBA1-204ENST00000487791 CSF1RP07333 972 aa28.76■■■□□ 2.19
HBA1-204ENST00000487791 IFIT5Q13325 482 aaKnown RBP28.76■■■□□ 2.19
HBA1-204ENST00000487791 CCDC57Q2TAC2 916 aa28.76■■■□□ 2.19
HBA1-204ENST00000487791 COL11A2P13942 1736 aaPredicted RBP28.76■■■□□ 2.19
HBA1-204ENST00000487791 ANKRD18BA2A2Z9 1011 aa28.75■■■□□ 2.19
HBA1-204ENST00000487791 GNAI2P04899 355 aa28.75■■■□□ 2.19
HBA1-204ENST00000487791 CENPBP07199 599 aaPredicted RBP28.75■■■□□ 2.19
HBA1-204ENST00000487791 MVPQ14764 893 aaKnown RBP28.75■■■□□ 2.19
HBA1-204ENST00000487791 LMBR1LQ6UX01 489 aa28.75■■■□□ 2.19
HBA1-204ENST00000487791 SUCLG2Q96I99 432 aa28.75■■■□□ 2.19
HBA1-204ENST00000487791 PPEF1O14829 653 aaPredicted RBP28.74■■■□□ 2.19
HBA1-204ENST00000487791 RLBP1P12271 317 aa28.74■■■□□ 2.19
HBA1-204ENST00000487791 RPS8P62241 208 aaKnown RBP28.74■■■□□ 2.19
HBA1-204ENST00000487791 FOXO4P98177 505 aa28.74■■■□□ 2.19
HBA1-204ENST00000487791 TAF7LQ5H9L4 462 aa28.74■■■□□ 2.19
HBA1-204ENST00000487791 ANKRD18AQ8IVF6 992 aa28.74■■■□□ 2.19
HBA1-204ENST00000487791 MEIS3Q99687 375 aa28.74■■■□□ 2.19
HBA1-204ENST00000487791 WWC3Q9ULE0 1092 aa28.74■■■□□ 2.19
HBA1-204ENST00000487791 BRCA1P38398 1863 aaKnown RBP28.73■■■□□ 2.19
HBA1-204ENST00000487791 IGHMBP2P38935 993 aaKnown RBP28.73■■■□□ 2.19
HBA1-204ENST00000487791 CCDC85AQ96PX6 553 aaPredicted RBP28.73■■■□□ 2.19
HBA1-204ENST00000487791 BICC1Q9H694 974 aaKnown RBP28.72■■■□□ 2.19
HBA1-204ENST00000487791 GREM2Q9H772 168 aa28.72■■■□□ 2.19
HBA1-204ENST00000487791 ITGA6P23229 1130 aa28.71■■■□□ 2.19
HBA1-204ENST00000487791 RTKN2Q8IZC4 609 aa28.71■■■□□ 2.19
HBA1-204ENST00000487791 MPHOSPH8Q99549 860 aa28.71■■■□□ 2.19
HBA1-204ENST00000487791 COG6Q9Y2V7 657 aa28.71■■■□□ 2.19
HBA1-204ENST00000487791 C21orf2O43822 256 aa28.7■■■□□ 2.18
HBA1-204ENST00000487791 RABL6Q3YEC7 729 aaPredicted RBP28.7■■■□□ 2.18
HBA1-204ENST00000487791 CCDC93Q567U6 631 aa28.7■■■□□ 2.18
HBA1-204ENST00000487791 LRRFIP2Q9Y608 721 aaKnown RBP28.7■■■□□ 2.18
HBA1-204ENST00000487791 ZBTB7BO15156 539 aaPredicted RBP28.69■■■□□ 2.18
HBA1-204ENST00000487791 FAM161AQ3B820 660 aa28.69■■■□□ 2.18
HBA1-204ENST00000487791 SP8Q8IXZ3 490 aa28.69■■■□□ 2.18
HBA1-204ENST00000487791 ATP6V0A2Q9Y487 856 aa28.69■■■□□ 2.18
HBA1-204ENST00000487791 ARFGEF1Q9Y6D6 1849 aa28.69■■■□□ 2.18
HBA1-204ENST00000487791 ARHGAP27Q6ZUM4 889 aa28.68■■■□□ 2.18
HBA1-204ENST00000487791 ZNF219Q9P2Y4 722 aaPredicted RBP28.68■■■□□ 2.18
HBA1-204ENST00000487791 YBX3P16989 372 aaKnown RBP eCLIP28.67■■■□□ 2.18
HBA1-204ENST00000487791 EPHA10Q5JZY3 1008 aa28.67■■■□□ 2.18
HBA1-204ENST00000487791 CELF1Q92879 486 aaKnown RBP28.67■■■□□ 2.18
HBA1-204ENST00000487791 SEC31BQ9NQW1 1179 aa28.67■■■□□ 2.18
HBA1-204ENST00000487791 SUPT16HQ9Y5B9 1047 aaKnown RBP28.67■■■□□ 2.18
HBA1-204ENST00000487791 KAZALD1Q96I82 304 aa28.66■■■□□ 2.18
HBA1-204ENST00000487791 SLX4Q8IY92 1834 aa28.65■■■□□ 2.18
HBA1-204ENST00000487791 ANKRD44Q8N8A2 993 aa28.65■■■□□ 2.18
HBA1-204ENST00000487791 BSDC1Q9NW68 430 aaPredicted RBP28.65■■■□□ 2.18
HBA1-204ENST00000487791 CACNA1SQ13698 1873 aa28.65■■■□□ 2.18
HBA1-204ENST00000487791 C20orf194Q5TEA3 1177 aa28.63■■■□□ 2.17
HBA1-204ENST00000487791 SUPT20HQ8NEM7 779 aa28.63■■■□□ 2.17
HBA1-204ENST00000487791 C7orf43Q8WVR3 580 aa28.63■■■□□ 2.17
HBA1-204ENST00000487791 MTX1Q13505 466 aa28.61■■■□□ 2.17
HBA1-204ENST00000487791 AAMPQ13685 434 aa28.61■■■□□ 2.17
HBA1-204ENST00000487791 LDHAL6AQ6ZMR3 332 aa28.61■■■□□ 2.17
HBA1-204ENST00000487791 MPNDQ8N594 471 aa28.61■■■□□ 2.17
HBA1-204ENST00000487791 ANKRD2Q9GZV1 360 aa28.61■■■□□ 2.17
HBA1-204ENST00000487791 TAOK3Q9H2K8 898 aa28.61■■■□□ 2.17
HBA1-204ENST00000487791 CNNM1Q9NRU3 951 aa28.61■■■□□ 2.17
HBA1-204ENST00000487791 SRGAP3O43295 1099 aa28.6■■■□□ 2.17
HBA1-204ENST00000487791 DPP8Q6V1X1 898 aaPredicted RBP28.6■■■□□ 2.17
HBA1-204ENST00000487791 ANKIB1Q9P2G1 1089 aa28.6■■■□□ 2.17
HBA1-204ENST00000487791 FBXO3Q9UK99 471 aa28.6■■■□□ 2.17
HBA1-204ENST00000487791 ZBTB40Q9NUA8 1239 aa28.59■■■□□ 2.17
HBA1-204ENST00000487791 PSMD1Q99460 953 aa28.58■■■□□ 2.17
HBA1-204ENST00000487791 NSFL1CQ9UNZ2 370 aaKnown RBP28.58■■■□□ 2.17
HBA1-204ENST00000487791 HMMRO75330 724 aa28.57■■■□□ 2.16
HBA1-204ENST00000487791 FKBP4Q02790 459 aaKnown RBP eCLIP28.57■■■□□ 2.16
HBA1-204ENST00000487791 RPAP2Q8IXW5 612 aaPredicted RBP28.57■■■□□ 2.16
HBA1-204ENST00000487791 LTBP3Q9NS15 1303 aa28.57■■■□□ 2.16
HBA1-204ENST00000487791 VPS33BQ9H267 617 aa28.56■■■□□ 2.16
HBA1-204ENST00000487791 TAF1P21675 1872 aa28.55■■■□□ 2.16
HBA1-204ENST00000487791 XDHP47989 1333 aa28.55■■■□□ 2.16
HBA1-204ENST00000487791 ATP8B2P98198 1209 aa28.55■■■□□ 2.16
HBA1-204ENST00000487791 EYA3Q99504 573 aa28.55■■■□□ 2.16
HBA1-204ENST00000487791 MROH5Q6ZUA9 1318 aa28.54■■■□□ 2.16
HBA1-204ENST00000487791 LMNB1P20700 586 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms