RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 THRAP3Q9Y2W1 955 aaKnown RBP9.87□□□□□ -0.83
SMC4-217ENST00000485867 CFAP70Q5T0N1 1121 aa9.86□□□□□ -0.83
SMC4-217ENST00000485867 PTF1AQ7RTS3 328 aa9.86□□□□□ -0.83
SMC4-217ENST00000485867 LINC00528Q8N1L1 170 aa9.86□□□□□ -0.83
SMC4-217ENST00000485867 IRF7Q92985 503 aa9.86□□□□□ -0.83
SMC4-217ENST00000485867 OCSTAMPQ9BR26 566 aa9.86□□□□□ -0.83
SMC4-217ENST00000485867 HIRIP3Q9BW71 556 aaPredicted RBP9.86□□□□□ -0.83
SMC4-217ENST00000485867 MTFR1LQ9H019 292 aa9.86□□□□□ -0.83
SMC4-217ENST00000485867 POGKQ9P215 609 aa9.86□□□□□ -0.83
SMC4-217ENST00000485867 EMILIN1Q9Y6C2 1016 aa9.86□□□□□ -0.83
SMC4-217ENST00000485867 COL5A2P05997 1499 aaPredicted RBP9.85□□□□□ -0.83
SMC4-217ENST00000485867 ERBB4Q15303 1308 aa9.85□□□□□ -0.83
SMC4-217ENST00000485867 ADGRB1O14514 1584 aa9.85□□□□□ -0.83
SMC4-217ENST00000485867 AP1G2O75843 785 aa9.85□□□□□ -0.83
SMC4-217ENST00000485867 GMPRP36959 345 aa9.85□□□□□ -0.83
SMC4-217ENST00000485867 TOPAZ1Q8N9V7 1692 aa9.85□□□□□ -0.83
SMC4-217ENST00000485867 CPDO75976 1380 aa9.85□□□□□ -0.83
SMC4-217ENST00000485867 SLC15A2Q16348 729 aa9.84□□□□□ -0.83
SMC4-217ENST00000485867 NUTM2GQ5VZR2 741 aa9.84□□□□□ -0.83
SMC4-217ENST00000485867 STK32BQ9NY57 414 aa9.84□□□□□ -0.83
SMC4-217ENST00000485867 PAPPAQ13219 1627 aa9.84□□□□□ -0.83
SMC4-217ENST00000485867 BCL9O00512 1426 aa9.83□□□□□ -0.84
SMC4-217ENST00000485867 CRB1P82279 1406 aa9.83□□□□□ -0.84
SMC4-217ENST00000485867 COL24A1Q17RW2 1714 aa9.83□□□□□ -0.84
SMC4-217ENST00000485867 WASLO00401 505 aaPredicted RBP9.83□□□□□ -0.84
SMC4-217ENST00000485867 UPP2O95045 317 aa9.83□□□□□ -0.84
SMC4-217ENST00000485867 BMP2P12643 396 aa9.83□□□□□ -0.84
SMC4-217ENST00000485867 GPR162Q16538 588 aa9.83□□□□□ -0.84
SMC4-217ENST00000485867 EPS8L1Q8TE68 723 aa9.83□□□□□ -0.84
SMC4-217ENST00000485867 SLC10A4Q96EP9 437 aa9.83□□□□□ -0.84
SMC4-217ENST00000485867 ARXQ96QS3 562 aa9.83□□□□□ -0.84
SMC4-217ENST00000485867 MAN1A2O60476 641 aa9.82□□□□□ -0.84
SMC4-217ENST00000485867 USP17L8P0C7I0 530 aa9.82□□□□□ -0.84
SMC4-217ENST00000485867 TXNRD1Q16881 649 aa9.82□□□□□ -0.84
SMC4-217ENST00000485867 PPP1R26Q5T8A7 1209 aaPredicted RBP9.82□□□□□ -0.84
SMC4-217ENST00000485867 ZBTB33Q86T24 672 aa9.82□□□□□ -0.84
SMC4-217ENST00000485867 HMX1Q9NP08 348 aaPredicted RBP9.82□□□□□ -0.84
SMC4-217ENST00000485867 CDV3Q9UKY7 258 aaKnown RBP9.82□□□□□ -0.84
SMC4-217ENST00000485867 GPSM3Q9Y4H4 160 aa9.82□□□□□ -0.84
SMC4-217ENST00000485867 AATKQ6ZMQ8 1374 aa9.82□□□□□ -0.84
SMC4-217ENST00000485867 ARHGEF28Q8N1W1 1705 aaKnown RBP9.82□□□□□ -0.84
SMC4-217ENST00000485867 USP19O94966 1318 aa9.82□□□□□ -0.84
SMC4-217ENST00000485867 DDB1Q16531 1140 aa9.81□□□□□ -0.84
SMC4-217ENST00000485867 KCTD15Q96SI1 283 aaPredicted RBP9.81□□□□□ -0.84
SMC4-217ENST00000485867 TSEN34Q9BSV6 310 aaKnown RBP9.81□□□□□ -0.84
SMC4-217ENST00000485867 GOPCQ9HD26 462 aa9.81□□□□□ -0.84
SMC4-217ENST00000485867 QSER1Q2KHR3 1735 aa9.81□□□□□ -0.84
SMC4-217ENST00000485867 NHSQ6T4R5 1651 aa9.8□□□□□ -0.84
SMC4-217ENST00000485867 POLR3AO14802 1390 aaPredicted RBP9.8□□□□□ -0.84
SMC4-217ENST00000485867 LORP23490 312 aaPredicted RBP9.8□□□□□ -0.84
SMC4-217ENST00000485867 RFC5P40937 340 aa9.8□□□□□ -0.84
SMC4-217ENST00000485867 PTK2Q05397 1052 aa9.8□□□□□ -0.84
SMC4-217ENST00000485867 Q6ZVU0 165 aa9.8□□□□□ -0.84
SMC4-217ENST00000485867 MARCH10Q8NA82 808 aaPredicted RBP9.8□□□□□ -0.84
SMC4-217ENST00000485867 DNMT3LQ9UJW3 386 aa9.8□□□□□ -0.84
SMC4-217ENST00000485867 TRAK1Q9UPV9 953 aa9.8□□□□□ -0.84
SMC4-217ENST00000485867 COL18A1P39060 1754 aa9.8□□□□□ -0.84
SMC4-217ENST00000485867 GOLGB1Q14789 3259 aaKnown RBP9.8□□□□□ -0.84
SMC4-217ENST00000485867 KAT6BQ8WYB5 2073 aa9.79□□□□□ -0.84
SMC4-217ENST00000485867 VSIG8P0DPA2 414 aa9.79□□□□□ -0.84
SMC4-217ENST00000485867 ADAM32Q8TC27 787 aa9.79□□□□□ -0.84
SMC4-217ENST00000485867 PGPEP1Q9NXJ5 209 aa9.79□□□□□ -0.84
SMC4-217ENST00000485867 TUBGCP6Q96RT7 1819 aa9.79□□□□□ -0.84
SMC4-217ENST00000485867 RGPD5Q99666 1765 aa9.78□□□□□ -0.84
SMC4-217ENST00000485867 BTAF1O14981 1849 aa9.78□□□□□ -0.84
SMC4-217ENST00000485867 HSPA6P17066 643 aa9.78□□□□□ -0.84
SMC4-217ENST00000485867 CBLBQ13191 982 aa9.78□□□□□ -0.84
SMC4-217ENST00000485867 INTS6LQ5JSJ4 861 aaKnown RBP9.78□□□□□ -0.84
SMC4-217ENST00000485867 NUDT16Q96DE0 195 aaKnown RBP9.78□□□□□ -0.84
SMC4-217ENST00000485867 ATP10DQ9P241 1426 aa9.78□□□□□ -0.84
SMC4-217ENST00000485867 ACEP12821 1306 aa9.77□□□□□ -0.85
SMC4-217ENST00000485867 GCP02774 474 aa9.76□□□□□ -0.85
SMC4-217ENST00000485867 DHX9Q08211 1270 aaKnown RBP9.76□□□□□ -0.85
SMC4-217ENST00000485867 PPARGC1BQ86YN6 1023 aaKnown RBP9.76□□□□□ -0.85
SMC4-217ENST00000485867 ABTB2Q8N961 1025 aa9.76□□□□□ -0.85
SMC4-217ENST00000485867 SLIT3O75094 1523 aa9.76□□□□□ -0.85
SMC4-217ENST00000485867 PPFIA3O75145 1194 aa9.75□□□□□ -0.85
SMC4-217ENST00000485867 PNMA1Q8ND90 353 aa9.75□□□□□ -0.85
SMC4-217ENST00000485867 MPHOSPH9Q99550 1183 aa9.75□□□□□ -0.85
SMC4-217ENST00000485867 TRIM34Q9BYJ4 488 aa9.75□□□□□ -0.85
SMC4-217ENST00000485867 TTLL8A6PVC2 850 aa9.74□□□□□ -0.85
SMC4-217ENST00000485867 SPINT1O43278 529 aa9.74□□□□□ -0.85
SMC4-217ENST00000485867 YBX3P16989 372 aaKnown RBP eCLIP9.74□□□□□ -0.85
SMC4-217ENST00000485867 ZNF827Q17R98 1081 aa9.74□□□□□ -0.85
SMC4-217ENST00000485867 TOM1L2Q6ZVM7 507 aa9.74□□□□□ -0.85
SMC4-217ENST00000485867 NLRP13Q86W25 1043 aa9.74□□□□□ -0.85
SMC4-217ENST00000485867 ZSCAN1Q8NBB4 408 aa9.74□□□□□ -0.85
SMC4-217ENST00000485867 NLGN2Q8NFZ4 835 aa9.74□□□□□ -0.85
SMC4-217ENST00000485867 PCMTD1Q96MG8 357 aaPredicted RBP9.74□□□□□ -0.85
SMC4-217ENST00000485867 CDCA7Q9BWT1 371 aaPredicted RBP9.74□□□□□ -0.85
SMC4-217ENST00000485867 WDR17Q8IZU2 1322 aa9.74□□□□□ -0.85
SMC4-217ENST00000485867 ADCY9O60503 1353 aa9.74□□□□□ -0.85
SMC4-217ENST00000485867 TNS2Q63HR2 1409 aa9.73□□□□□ -0.85
SMC4-217ENST00000485867 ZBTB7CA1YPR0 619 aa9.73□□□□□ -0.85
SMC4-217ENST00000485867 NEUROD2Q15784 382 aa9.73□□□□□ -0.85
SMC4-217ENST00000485867 NBPF20Q3BBV1 942 aa9.73□□□□□ -0.85
SMC4-217ENST00000485867 TRPM1Q7Z4N2 1603 aa9.73□□□□□ -0.85
SMC4-217ENST00000485867 ABCC6O95255 1503 aa9.72□□□□□ -0.85
SMC4-217ENST00000485867 PIK3C2AO00443 1686 aa9.72□□□□□ -0.85
SMC4-217ENST00000485867 GRIN3BO60391 1043 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms