RNA–Protein interactions for RNA: ENST00000485532.1

PRAME-212, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 3

Gene PRAME, Length 709 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-212ENST00000485532 VEGFBP49765 207 aa16.42■□□□□ 0.22
PRAME-212ENST00000485532 GRAPQ13588 217 aa16.42■□□□□ 0.22
PRAME-212ENST00000485532 DPP8Q6V1X1 898 aaPredicted RBP16.42■□□□□ 0.22
PRAME-212ENST00000485532 DDX46Q7L014 1031 aaKnown RBP16.42■□□□□ 0.22
PRAME-212ENST00000485532 SP8Q8IXZ3 490 aa16.42■□□□□ 0.22
PRAME-212ENST00000485532 GRAPLQ8TC17 118 aaPredicted RBP16.42■□□□□ 0.22
PRAME-212ENST00000485532 ISCA1Q9BUE6 129 aa16.42■□□□□ 0.22
PRAME-212ENST00000485532 RTFDC1Q9BY42 306 aaPredicted RBP16.42■□□□□ 0.22
PRAME-212ENST00000485532 TMX4Q9H1E5 349 aaPredicted RBP16.42■□□□□ 0.22
PRAME-212ENST00000485532 DUOX1Q9NRD9 1551 aa16.42■□□□□ 0.22
PRAME-212ENST00000485532 CXCL9Q07325 125 aa16.41■□□□□ 0.22
PRAME-212ENST00000485532 TNS4Q8IZW8 715 aa16.41■□□□□ 0.22
PRAME-212ENST00000485532 MPNDQ8N594 471 aa16.41■□□□□ 0.22
PRAME-212ENST00000485532 PHAXQ9H814 394 aaKnown RBP16.41■□□□□ 0.22
PRAME-212ENST00000485532 LRRC37AA6NMS7 1700 aa16.4■□□□□ 0.22
PRAME-212ENST00000485532 CAPN15O75808 1086 aa16.4■□□□□ 0.22
PRAME-212ENST00000485532 CCDC184Q52MB2 194 aa16.4■□□□□ 0.22
PRAME-212ENST00000485532 HYPKQ9NX55 129 aa16.4■□□□□ 0.22
PRAME-212ENST00000485532 RAD17O75943 681 aa16.39■□□□□ 0.21
PRAME-212ENST00000485532 SUPT20HQ8NEM7 779 aa16.39■□□□□ 0.21
PRAME-212ENST00000485532 CELF1Q92879 486 aaKnown RBP16.39■□□□□ 0.21
PRAME-212ENST00000485532 ZNRF3Q9ULT6 936 aa16.39■□□□□ 0.21
PRAME-212ENST00000485532 TRAF5O00463 557 aa16.38■□□□□ 0.21
PRAME-212ENST00000485532 FOXN1O15353 648 aa16.38■□□□□ 0.21
PRAME-212ENST00000485532 GMPSP49915 693 aaPredicted RBP16.38■□□□□ 0.21
PRAME-212ENST00000485532 KIAA2012Q0VF49 1180 aa16.38■□□□□ 0.21
PRAME-212ENST00000485532 C8orf58Q8NAV2 365 aa16.38■□□□□ 0.21
PRAME-212ENST00000485532 IFT57Q9NWB7 429 aa16.38■□□□□ 0.21
PRAME-212ENST00000485532 GPRC5DQ9NZD1 345 aa16.38■□□□□ 0.21
PRAME-212ENST00000485532 SHTN1A0MZ66 631 aa16.37■□□□□ 0.21
PRAME-212ENST00000485532 YDJCA8MPS7 323 aa16.37■□□□□ 0.21
PRAME-212ENST00000485532 USP50Q70EL3 339 aaPredicted RBP16.37■□□□□ 0.21
PRAME-212ENST00000485532 JARID2Q92833 1246 aaPredicted RBP16.37■□□□□ 0.21
PRAME-212ENST00000485532 VPS33BQ9H267 617 aa16.37■□□□□ 0.21
PRAME-212ENST00000485532 TRPM7Q96QT4 1865 aa16.37■□□□□ 0.21
PRAME-212ENST00000485532 IRS4O14654 1257 aaPredicted RBP16.36■□□□□ 0.21
PRAME-212ENST00000485532 GNAI1P63096 354 aa16.36■□□□□ 0.21
PRAME-212ENST00000485532 SF3B3Q15393 1217 aaKnown RBP16.36■□□□□ 0.21
PRAME-212ENST00000485532 DEFB115Q30KQ5 88 aa16.36■□□□□ 0.21
PRAME-212ENST00000485532 CIAPIN1Q6FI81 312 aa16.36■□□□□ 0.21
PRAME-212ENST00000485532 RIC3Q7Z5B4 369 aa16.36■□□□□ 0.21
PRAME-212ENST00000485532 ADARB2Q9NS39 739 aaKnown RBP16.36■□□□□ 0.21
PRAME-212ENST00000485532 ABT1Q9ULW3 272 aaKnown RBP16.36■□□□□ 0.21
PRAME-212ENST00000485532 RASSF10A6NK89 507 aa16.35■□□□□ 0.21
PRAME-212ENST00000485532 ANP32CO43423 234 aa16.35■□□□□ 0.21
PRAME-212ENST00000485532 GPSM2P81274 684 aa16.35■□□□□ 0.21
PRAME-212ENST00000485532 CST9Q5W186 159 aa16.35■□□□□ 0.21
PRAME-212ENST00000485532 MIER1Q8N108 512 aa16.35■□□□□ 0.21
PRAME-212ENST00000485532 TSPYL6Q8N831 410 aa16.35■□□□□ 0.21
PRAME-212ENST00000485532 GPR101Q96P66 508 aaPredicted RBP16.35■□□□□ 0.21
PRAME-212ENST00000485532 MYD88Q99836 296 aa16.35■□□□□ 0.21
PRAME-212ENST00000485532 RIMBP2O15034 1052 aa16.34■□□□□ 0.21
PRAME-212ENST00000485532 GOLGA2Q08379 1002 aa16.34■□□□□ 0.21
PRAME-212ENST00000485532 TRIM28Q13263 835 aaKnown RBP16.34■□□□□ 0.21
PRAME-212ENST00000485532 DBNDD1Q9H9R9 158 aa16.34■□□□□ 0.21
PRAME-212ENST00000485532 POLLQ9UGP5 575 aa16.34■□□□□ 0.21
PRAME-212ENST00000485532 NSFL1CQ9UNZ2 370 aaKnown RBP16.34■□□□□ 0.21
PRAME-212ENST00000485532 HIRAP54198 1017 aaPredicted RBP16.33■□□□□ 0.2
PRAME-212ENST00000485532 WASHC4Q2M389 1173 aa16.33■□□□□ 0.2
PRAME-212ENST00000485532 TMC4Q7Z404 712 aa16.33■□□□□ 0.2
PRAME-212ENST00000485532 TRPM4Q8TD43 1214 aa16.33■□□□□ 0.2
PRAME-212ENST00000485532 TSR2Q969E8 191 aaKnown RBP16.33■□□□□ 0.2
PRAME-212ENST00000485532 BCL2L13Q9BXK5 485 aa16.33■□□□□ 0.2
PRAME-212ENST00000485532 SEC31BQ9NQW1 1179 aa16.33■□□□□ 0.2
PRAME-212ENST00000485532 KCNQ5Q9NR82 932 aa16.33■□□□□ 0.2
PRAME-212ENST00000485532 ZBTB12Q9Y330 459 aaPredicted RBP16.33■□□□□ 0.2
PRAME-212ENST00000485532 C6orf229H3BNL8 230 aa16.32■□□□□ 0.2
PRAME-212ENST00000485532 CALD1Q05682 793 aaKnown RBP16.32■□□□□ 0.2
PRAME-212ENST00000485532 TNIP1Q15025 636 aa16.32■□□□□ 0.2
PRAME-212ENST00000485532 DOK7Q18PE1 504 aa16.32■□□□□ 0.2
PRAME-212ENST00000485532 ZBTB38Q8NAP3 1195 aaPredicted RBP16.32■□□□□ 0.2
PRAME-212ENST00000485532 CCDC85AQ96PX6 553 aaPredicted RBP16.32■□□□□ 0.2
PRAME-212ENST00000485532 GLIS2Q9BZE0 524 aaPredicted RBP16.32■□□□□ 0.2
PRAME-212ENST00000485532 WDR33Q9C0J8 1336 aaKnown RBP16.32■□□□□ 0.2
PRAME-212ENST00000485532 WBP1LQ9NX94 342 aa16.32■□□□□ 0.2
PRAME-212ENST00000485532 PSMD14O00487 310 aa16.31■□□□□ 0.2
PRAME-212ENST00000485532 RPS8P62241 208 aaKnown RBP16.31■□□□□ 0.2
PRAME-212ENST00000485532 GRM1Q13255 1194 aa16.31■□□□□ 0.2
PRAME-212ENST00000485532 CYP4F22Q6NT55 531 aa16.31■□□□□ 0.2
PRAME-212ENST00000485532 CNOT7Q9UIV1 285 aaKnown RBP16.31■□□□□ 0.2
PRAME-212ENST00000485532 SCN9AQ15858 1988 aa16.3■□□□□ 0.2
PRAME-212ENST00000485532 DLK2Q6UY11 383 aa16.3■□□□□ 0.2
PRAME-212ENST00000485532 PAXIP1Q6ZW49 1069 aaPredicted RBP16.3■□□□□ 0.2
PRAME-212ENST00000485532 AIDAQ96BJ3 306 aa16.3■□□□□ 0.2
PRAME-212ENST00000485532 ECE2O60344 883 aa16.29■□□□□ 0.2
PRAME-212ENST00000485532 EGFRP00533 1210 aa16.29■□□□□ 0.2
PRAME-212ENST00000485532 PCCAP05165 728 aaPredicted RBP16.29■□□□□ 0.2
PRAME-212ENST00000485532 LBX1P52954 281 aa16.29■□□□□ 0.2
PRAME-212ENST00000485532 CCDC30Q5VVM6 783 aa16.29■□□□□ 0.2
PRAME-212ENST00000485532 MICALL2Q8IY33 904 aa16.29■□□□□ 0.2
PRAME-212ENST00000485532 CCDC191Q8NCU4 936 aa16.29■□□□□ 0.2
PRAME-212ENST00000485532 TBC1D16Q8TBP0 767 aa16.29■□□□□ 0.2
PRAME-212ENST00000485532 CAPNS2Q96L46 248 aa16.29■□□□□ 0.2
PRAME-212ENST00000485532 METTL22Q9BUU2 404 aaPredicted RBP16.29■□□□□ 0.2
PRAME-212ENST00000485532 MAP3K2Q9Y2U5 619 aa16.29■□□□□ 0.2
PRAME-212ENST00000485532 RTL9Q8NET4 1388 aa16.28■□□□□ 0.2
PRAME-212ENST00000485532 CDHR2Q9BYE9 1310 aa16.28■□□□□ 0.2
PRAME-212ENST00000485532 POLR2AP24928 1970 aaKnown RBP16.28■□□□□ 0.2
PRAME-212ENST00000485532 THSD7BQ9C0I4 1608 aa16.28■□□□□ 0.2
PRAME-212ENST00000485532 CELF2O95319 508 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms