RNA–Protein interactions for RNA: ENST00000485112.1

CLASP1-213, Transcript of cytoplasmic linker associated protein 1, human

TSL 5

Gene CLASP1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLASP1-213	ENST00000485112	DDX60	Q8IY21	1712 aa	Known RBP	28.8	■■■□□ 2.2
CLASP1-213	ENST00000485112	PPEF1	O14829	653 aa	Predicted RBP	28.79	■■■□□ 2.2
CLASP1-213	ENST00000485112	LAMB2	P55268	1798 aa		28.78	■■■□□ 2.2
CLASP1-213	ENST00000485112	GRIPAP1	Q4V328	841 aa		28.78	■■■□□ 2.2
CLASP1-213	ENST00000485112	ATF7IP	Q6VMQ6	1270 aa		28.78	■■■□□ 2.2
CLASP1-213	ENST00000485112	TMC4	Q7Z404	712 aa		28.78	■■■□□ 2.2
CLASP1-213	ENST00000485112	ZKSCAN2	Q63HK3	967 aa		28.77	■■■□□ 2.2
CLASP1-213	ENST00000485112	RTKN2	Q8IZC4	609 aa		28.77	■■■□□ 2.2
CLASP1-213	ENST00000485112	SLX4	Q8IY92	1834 aa		28.76	■■■□□ 2.19
CLASP1-213	ENST00000485112	UTY	O14607	1347 aa		28.75	■■■□□ 2.19
CLASP1-213	ENST00000485112	TTLL11	Q8NHH1	800 aa		28.75	■■■□□ 2.19
CLASP1-213	ENST00000485112	ATP6V0A2	Q9Y487	856 aa		28.75	■■■□□ 2.19
CLASP1-213	ENST00000485112	TRIM27	P14373	513 aa		28.74	■■■□□ 2.19
CLASP1-213	ENST00000485112	LTBP3	Q9NS15	1303 aa		28.73	■■■□□ 2.19
CLASP1-213	ENST00000485112	TAOK3	Q9H2K8	898 aa		28.73	■■■□□ 2.19
CLASP1-213	ENST00000485112	RCAN3	Q9UKA8	241 aa		28.73	■■■□□ 2.19
CLASP1-213	ENST00000485112	RTL9	Q8NET4	1388 aa		28.73	■■■□□ 2.19
CLASP1-213	ENST00000485112	RPS8	P62241	208 aa	Known RBP	28.72	■■■□□ 2.19
CLASP1-213	ENST00000485112	INTS3	Q68E01	1043 aa	Known RBP	28.72	■■■□□ 2.19
CLASP1-213	ENST00000485112	SP8	Q8IXZ3	490 aa		28.72	■■■□□ 2.19
CLASP1-213	ENST00000485112	CDC5L	Q99459	802 aa	Known RBP	28.72	■■■□□ 2.19
CLASP1-213	ENST00000485112	NFKBIE	O00221	500 aa		28.71	■■■□□ 2.19
CLASP1-213	ENST00000485112	CSF1R	P07333	972 aa		28.71	■■■□□ 2.19
CLASP1-213	ENST00000485112	YY1	P25490	414 aa		28.71	■■■□□ 2.19
CLASP1-213	ENST00000485112	CELF1	Q92879	486 aa	Known RBP	28.71	■■■□□ 2.19
CLASP1-213	ENST00000485112	CCDC85A	Q96PX6	553 aa	Predicted RBP	28.71	■■■□□ 2.19
CLASP1-213	ENST00000485112	NBPF7	P0C2Y1	421 aa	Predicted RBP	28.7	■■■□□ 2.18
CLASP1-213	ENST00000485112	LMNB1	P20700	586 aa		28.7	■■■□□ 2.18
CLASP1-213	ENST00000485112	RASSF7	Q02833	373 aa		28.7	■■■□□ 2.18
CLASP1-213	ENST00000485112	USP44	Q9H0E7	712 aa		28.7	■■■□□ 2.18
CLASP1-213	ENST00000485112	SEC31B	Q9NQW1	1179 aa		28.7	■■■□□ 2.18
CLASP1-213	ENST00000485112	HDAC5	Q9UQL6	1122 aa		28.7	■■■□□ 2.18
CLASP1-213	ENST00000485112	FOXO4	P98177	505 aa		28.69	■■■□□ 2.18
CLASP1-213	ENST00000485112	FKBP4	Q02790	459 aa	Known RBP eCLIP	28.69	■■■□□ 2.18
CLASP1-213	ENST00000485112	ANKRD18A	Q8IVF6	992 aa		28.69	■■■□□ 2.18
CLASP1-213	ENST00000485112	GREM2	Q9H772	168 aa		28.69	■■■□□ 2.18
CLASP1-213	ENST00000485112	GOLGB1	Q14789	3259 aa	Known RBP	28.68	■■■□□ 2.18
CLASP1-213	ENST00000485112	OLFM4	Q6UX06	510 aa		28.68	■■■□□ 2.18
CLASP1-213	ENST00000485112	PSMD1	Q99460	953 aa		28.68	■■■□□ 2.18
CLASP1-213	ENST00000485112	CHD4	Q14839	1912 aa		28.67	■■■□□ 2.18
CLASP1-213	ENST00000485112	C9orf131	Q5VYM1	1079 aa		28.67	■■■□□ 2.18
CLASP1-213	ENST00000485112	FTSJ3	Q8IY81	847 aa	Known RBP	28.67	■■■□□ 2.18
CLASP1-213	ENST00000485112	SUCLG2	Q96I99	432 aa		28.67	■■■□□ 2.18
CLASP1-213	ENST00000485112	CACNA1S	Q13698	1873 aa		28.67	■■■□□ 2.18
CLASP1-213	ENST00000485112	MS4A1	P11836	297 aa		28.66	■■■□□ 2.18
CLASP1-213	ENST00000485112	CLUAP1	Q96AJ1	413 aa		28.66	■■■□□ 2.18
CLASP1-213	ENST00000485112	RNF181	Q9P0P0	153 aa		28.66	■■■□□ 2.18
CLASP1-213	ENST00000485112	ITGA6	P23229	1130 aa		28.65	■■■□□ 2.18
CLASP1-213	ENST00000485112	FAM161A	Q3B820	660 aa		28.65	■■■□□ 2.18
CLASP1-213	ENST00000485112	LMBR1L	Q6UX01	489 aa		28.65	■■■□□ 2.18
CLASP1-213	ENST00000485112	SNED1	Q8TER0	1413 aa		28.64	■■■□□ 2.18
CLASP1-213	ENST00000485112	ANKRD18B	A2A2Z9	1011 aa		28.64	■■■□□ 2.18
CLASP1-213	ENST00000485112	UBTFL1	P0CB47	393 aa	Predicted RBP	28.64	■■■□□ 2.18
CLASP1-213	ENST00000485112	IGHMBP2	P38935	993 aa	Known RBP	28.64	■■■□□ 2.18
CLASP1-213	ENST00000485112	IFIT5	Q13325	482 aa	Known RBP	28.64	■■■□□ 2.18
CLASP1-213	ENST00000485112	EPHA10	Q5JZY3	1008 aa		28.64	■■■□□ 2.18
CLASP1-213	ENST00000485112	DZIP1L	Q8IYY4	767 aa	Known RBP	28.64	■■■□□ 2.18
CLASP1-213	ENST00000485112	MPND	Q8N594	471 aa		28.64	■■■□□ 2.18
CLASP1-213	ENST00000485112	SUPT20H	Q8NEM7	779 aa		28.64	■■■□□ 2.18
CLASP1-213	ENST00000485112	CHMP3	Q9Y3E7	222 aa		28.64	■■■□□ 2.18
CLASP1-213	ENST00000485112	DPP8	Q6V1X1	898 aa	Predicted RBP	28.63	■■■□□ 2.17
CLASP1-213	ENST00000485112	FER1L6	Q2WGJ9	1857 aa		28.62	■■■□□ 2.17
CLASP1-213	ENST00000485112	GNAI3	P08754	354 aa		28.62	■■■□□ 2.17
CLASP1-213	ENST00000485112	CCDC57	Q2TAC2	916 aa		28.62	■■■□□ 2.17
CLASP1-213	ENST00000485112	KAZALD1	Q96I82	304 aa		28.62	■■■□□ 2.17
CLASP1-213	ENST00000485112	BSDC1	Q9NW68	430 aa	Predicted RBP	28.62	■■■□□ 2.17
CLASP1-213	ENST00000485112	TNN	Q9UQP3	1299 aa		28.62	■■■□□ 2.17
CLASP1-213	ENST00000485112	ZC3H4	Q9UPT8	1303 aa	Known RBP	28.62	■■■□□ 2.17
CLASP1-213	ENST00000485112	MYH3	P11055	1940 aa		28.61	■■■□□ 2.17
CLASP1-213	ENST00000485112	RABL6	Q3YEC7	729 aa	Predicted RBP	28.61	■■■□□ 2.17
CLASP1-213	ENST00000485112	RTFDC1	Q9BY42	306 aa	Predicted RBP	28.61	■■■□□ 2.17
CLASP1-213	ENST00000485112	VPS33B	Q9H267	617 aa		28.61	■■■□□ 2.17
CLASP1-213	ENST00000485112	BICC1	Q9H694	974 aa	Known RBP	28.61	■■■□□ 2.17
CLASP1-213	ENST00000485112	PRELP	P51888	382 aa		28.6	■■■□□ 2.17
CLASP1-213	ENST00000485112	TMEM57	Q8N5G2	664 aa		28.6	■■■□□ 2.17
CLASP1-213	ENST00000485112	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	28.6	■■■□□ 2.17
CLASP1-213	ENST00000485112	MPHOSPH8	Q99549	860 aa		28.6	■■■□□ 2.17
CLASP1-213	ENST00000485112	ZNF277	Q9NRM2	450 aa	Predicted RBP	28.59	■■■□□ 2.17
CLASP1-213	ENST00000485112	IARS	P41252	1262 aa	Known RBP	28.58	■■■□□ 2.17
CLASP1-213	ENST00000485112	TAF7L	Q5H9L4	462 aa		28.58	■■■□□ 2.17
CLASP1-213	ENST00000485112	MEIS3	Q99687	375 aa		28.58	■■■□□ 2.17
CLASP1-213	ENST00000485112	NSFL1C	Q9UNZ2	370 aa	Known RBP	28.58	■■■□□ 2.17
CLASP1-213	ENST00000485112	UTRN	P46939	3433 aa		28.57	■■■□□ 2.16
CLASP1-213	ENST00000485112	SLC51A	Q86UW1	340 aa		28.57	■■■□□ 2.16
CLASP1-213	ENST00000485112	ANKRD44	Q8N8A2	993 aa		28.57	■■■□□ 2.16
CLASP1-213	ENST00000485112	PODXL2	Q9NZ53	605 aa		28.57	■■■□□ 2.16
CLASP1-213	ENST00000485112	GPSM2	P81274	684 aa		28.56	■■■□□ 2.16
CLASP1-213	ENST00000485112	ITPRIP	Q8IWB1	547 aa		28.55	■■■□□ 2.16
CLASP1-213	ENST00000485112	ANKIB1	Q9P2G1	1089 aa		28.55	■■■□□ 2.16
CLASP1-213	ENST00000485112	TAF1	P21675	1872 aa		28.55	■■■□□ 2.16
CLASP1-213	ENST00000485112	LRRC37A	A6NMS7	1700 aa		28.55	■■■□□ 2.16
CLASP1-213	ENST00000485112	COL4A1	P02462	1669 aa		28.54	■■■□□ 2.16
CLASP1-213	ENST00000485112	MINPP1	Q9UNW1	487 aa		28.54	■■■□□ 2.16
CLASP1-213	ENST00000485112	XDH	P47989	1333 aa		28.53	■■■□□ 2.16
CLASP1-213	ENST00000485112	RLBP1	P12271	317 aa		28.53	■■■□□ 2.16
CLASP1-213	ENST00000485112	LARGE2	Q8N3Y3	721 aa		28.53	■■■□□ 2.16
CLASP1-213	ENST00000485112	JDP2	Q8WYK2	163 aa		28.53	■■■□□ 2.16
CLASP1-213	ENST00000485112	EYA3	Q99504	573 aa		28.53	■■■□□ 2.16
CLASP1-213	ENST00000485112	ANKRD2	Q9GZV1	360 aa		28.53	■■■□□ 2.16
CLASP1-213	ENST00000485112	LRRFIP2	Q9Y608	721 aa	Known RBP	28.53	■■■□□ 2.16

Retrieved 100 of 20,778 RNA–protein pairs in 400.7 ms