RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 KIF16BQ96L93 1317 aa22.55■■□□□ 1.2
SREBF1-213ENST00000485080 RTL9Q8NET4 1388 aa22.54■■□□□ 1.2
SREBF1-213ENST00000485080 LMNB1P20700 586 aa22.54■■□□□ 1.2
SREBF1-213ENST00000485080 CCDC152Q4G0S7 254 aa22.54■■□□□ 1.2
SREBF1-213ENST00000485080 ATP6V0A2Q9Y487 856 aa22.54■■□□□ 1.2
SREBF1-213ENST00000485080 GRM8O00222 908 aa22.53■■□□□ 1.2
SREBF1-213ENST00000485080 PPEF1O14829 653 aaPredicted RBP22.53■■□□□ 1.2
SREBF1-213ENST00000485080 CTSWP56202 376 aa22.53■■□□□ 1.2
SREBF1-213ENST00000485080 SLC4A10Q6U841 1118 aa22.53■■□□□ 1.2
SREBF1-213ENST00000485080 JARID2Q92833 1246 aaPredicted RBP22.53■■□□□ 1.2
SREBF1-213ENST00000485080 API5Q9BZZ5 524 aaKnown RBP22.53■■□□□ 1.2
SREBF1-213ENST00000485080 TAOK3Q9H2K8 898 aa22.53■■□□□ 1.2
SREBF1-213ENST00000485080 NOB1Q9ULX3 412 aaKnown RBP22.53■■□□□ 1.2
SREBF1-213ENST00000485080 C9orf131Q5VYM1 1079 aa22.52■■□□□ 1.2
SREBF1-213ENST00000485080 SP8Q8IXZ3 490 aa22.52■■□□□ 1.2
SREBF1-213ENST00000485080 TTLL11Q8NHH1 800 aa22.52■■□□□ 1.2
SREBF1-213ENST00000485080 PSMD1Q99460 953 aa22.52■■□□□ 1.2
SREBF1-213ENST00000485080 ZNF219Q9P2Y4 722 aaPredicted RBP22.52■■□□□ 1.2
SREBF1-213ENST00000485080 UTYO14607 1347 aa22.52■■□□□ 1.2
SREBF1-213ENST00000485080 ZC3H4Q9UPT8 1303 aaKnown RBP22.52■■□□□ 1.2
SREBF1-213ENST00000485080 MYH3P11055 1940 aa22.51■■□□□ 1.19
SREBF1-213ENST00000485080 PRELPP51888 382 aa22.51■■□□□ 1.19
SREBF1-213ENST00000485080 FKBP4Q02790 459 aaKnown RBP eCLIP22.51■■□□□ 1.19
SREBF1-213ENST00000485080 RASSF7Q02833 373 aa22.51■■□□□ 1.19
SREBF1-213ENST00000485080 CSF1RP07333 972 aa22.5■■□□□ 1.19
SREBF1-213ENST00000485080 IPO8O15397 1037 aaKnown RBP22.49■■□□□ 1.19
SREBF1-213ENST00000485080 RPS8P62241 208 aaKnown RBP22.49■■□□□ 1.19
SREBF1-213ENST00000485080 OLFM4Q6UX06 510 aa22.49■■□□□ 1.19
SREBF1-213ENST00000485080 CELF1Q92879 486 aaKnown RBP22.49■■□□□ 1.19
SREBF1-213ENST00000485080 TMX4Q9H1E5 349 aaPredicted RBP22.49■■□□□ 1.19
SREBF1-213ENST00000485080 C9orf78Q9NZ63 289 aaPredicted RBP22.49■■□□□ 1.19
SREBF1-213ENST00000485080 CCT4P50991 539 aaKnown RBP22.48■■□□□ 1.19
SREBF1-213ENST00000485080 RNF181Q9P0P0 153 aa22.48■■□□□ 1.19
SREBF1-213ENST00000485080 BCAR3O75815 825 aa22.47■■□□□ 1.19
SREBF1-213ENST00000485080 ZNF784Q8NCA9 323 aaPredicted RBP22.47■■□□□ 1.19
SREBF1-213ENST00000485080 RTFDC1Q9BY42 306 aaPredicted RBP22.47■■□□□ 1.19
SREBF1-213ENST00000485080 TAF1P21675 1872 aa22.47■■□□□ 1.19
SREBF1-213ENST00000485080 LRRC37AA6NMS7 1700 aa22.46■■□□□ 1.19
SREBF1-213ENST00000485080 FOXO4P98177 505 aa22.46■■□□□ 1.19
SREBF1-213ENST00000485080 VPS33BQ9H267 617 aa22.46■■□□□ 1.19
SREBF1-213ENST00000485080 SEC31BQ9NQW1 1179 aa22.46■■□□□ 1.19
SREBF1-213ENST00000485080 DICER1Q9UPY3 1922 aaKnown RBP22.46■■□□□ 1.19
SREBF1-213ENST00000485080 CCDC88AQ3V6T2 1871 aa22.45■■□□□ 1.19
SREBF1-213ENST00000485080 ATF7IPQ6VMQ6 1270 aa22.45■■□□□ 1.18
SREBF1-213ENST00000485080 CDC5LQ99459 802 aaKnown RBP22.45■■□□□ 1.18
SREBF1-213ENST00000485080 USP44Q9H0E7 712 aa22.45■■□□□ 1.18
SREBF1-213ENST00000485080 GREM2Q9H772 168 aa22.45■■□□□ 1.18
SREBF1-213ENST00000485080 NBPF7P0C2Y1 421 aaPredicted RBP22.44■■□□□ 1.18
SREBF1-213ENST00000485080 INTS3Q68E01 1043 aaKnown RBP22.44■■□□□ 1.18
SREBF1-213ENST00000485080 COL4A1P02462 1669 aa22.43■■□□□ 1.18
SREBF1-213ENST00000485080 ANKRD18AQ8IVF6 992 aa22.43■■□□□ 1.18
SREBF1-213ENST00000485080 TRIM27P14373 513 aa22.42■■□□□ 1.18
SREBF1-213ENST00000485080 SLC51AQ86UW1 340 aa22.42■■□□□ 1.18
SREBF1-213ENST00000485080 MPNDQ8N594 471 aa22.42■■□□□ 1.18
SREBF1-213ENST00000485080 SUPT20HQ8NEM7 779 aa22.42■■□□□ 1.18
SREBF1-213ENST00000485080 KAZALD1Q96I82 304 aa22.42■■□□□ 1.18
SREBF1-213ENST00000485080 ZNF277Q9NRM2 450 aaPredicted RBP22.42■■□□□ 1.18
SREBF1-213ENST00000485080 BSDC1Q9NW68 430 aaPredicted RBP22.42■■□□□ 1.18
SREBF1-213ENST00000485080 IARSP41252 1262 aaKnown RBP22.41■■□□□ 1.18
SREBF1-213ENST00000485080 RABL6Q3YEC7 729 aaPredicted RBP22.41■■□□□ 1.18
SREBF1-213ENST00000485080 EPHA10Q5JZY3 1008 aa22.41■■□□□ 1.18
SREBF1-213ENST00000485080 ZKSCAN2Q63HK3 967 aa22.41■■□□□ 1.18
SREBF1-213ENST00000485080 DPP8Q6V1X1 898 aaPredicted RBP22.41■■□□□ 1.18
SREBF1-213ENST00000485080 CCDC85AQ96PX6 553 aaPredicted RBP22.41■■□□□ 1.18
SREBF1-213ENST00000485080 PODXL2Q9NZ53 605 aa22.41■■□□□ 1.18
SREBF1-213ENST00000485080 ITGA6P23229 1130 aa22.4■■□□□ 1.18
SREBF1-213ENST00000485080 FAM161AQ3B820 660 aa22.4■■□□□ 1.18
SREBF1-213ENST00000485080 SUCLG2Q96I99 432 aa22.4■■□□□ 1.18
SREBF1-213ENST00000485080 LMBR1LQ6UX01 489 aa22.39■■□□□ 1.17
SREBF1-213ENST00000485080 LTBP1Q14766 1721 aa22.38■■□□□ 1.17
SREBF1-213ENST00000485080 ANKRD18BA2A2Z9 1011 aa22.38■■□□□ 1.17
SREBF1-213ENST00000485080 IFIT5Q13325 482 aaKnown RBP22.38■■□□□ 1.17
SREBF1-213ENST00000485080 FRAT1Q92837 279 aaPredicted RBP22.38■■□□□ 1.17
SREBF1-213ENST00000485080 HDAC5Q9UQL6 1122 aa22.38■■□□□ 1.17
SREBF1-213ENST00000485080 DUOX1Q9NRD9 1551 aa22.38■■□□□ 1.17
SREBF1-213ENST00000485080 IGHMBP2P38935 993 aaKnown RBP22.37■■□□□ 1.17
SREBF1-213ENST00000485080 TIAM2Q8IVF5 1701 aa22.37■■□□□ 1.17
SREBF1-213ENST00000485080 GLTPD2A6NH11 291 aa22.36■■□□□ 1.17
SREBF1-213ENST00000485080 FZD9O00144 591 aa22.36■■□□□ 1.17
SREBF1-213ENST00000485080 GPSM2P81274 684 aa22.36■■□□□ 1.17
SREBF1-213ENST00000485080 KIAA2012Q0VF49 1180 aa22.36■■□□□ 1.17
SREBF1-213ENST00000485080 NSFL1CQ9UNZ2 370 aaKnown RBP22.36■■□□□ 1.17
SREBF1-213ENST00000485080 KDM2BQ8NHM5 1336 aa22.35■■□□□ 1.17
SREBF1-213ENST00000485080 CCDC57Q2TAC2 916 aa22.35■■□□□ 1.17
SREBF1-213ENST00000485080 ANKRD44Q8N8A2 993 aa22.35■■□□□ 1.17
SREBF1-213ENST00000485080 JDP2Q8WYK2 163 aa22.35■■□□□ 1.17
SREBF1-213ENST00000485080 BICC1Q9H694 974 aaKnown RBP22.35■■□□□ 1.17
SREBF1-213ENST00000485080 MINPP1Q9UNW1 487 aa22.35■■□□□ 1.17
SREBF1-213ENST00000485080 XDHP47989 1333 aa22.34■■□□□ 1.17
SREBF1-213ENST00000485080 UBTFL1P0CB47 393 aaPredicted RBP22.34■■□□□ 1.17
SREBF1-213ENST00000485080 LARGE2Q8N3Y3 721 aa22.34■■□□□ 1.17
SREBF1-213ENST00000485080 TBC1D16Q8TBP0 767 aa22.34■■□□□ 1.17
SREBF1-213ENST00000485080 MPHOSPH8Q99549 860 aa22.34■■□□□ 1.17
SREBF1-213ENST00000485080 GPBP1L1Q9HC44 474 aaPredicted RBP22.34■■□□□ 1.17
SREBF1-213ENST00000485080 POLLQ9UGP5 575 aa22.34■■□□□ 1.17
SREBF1-213ENST00000485080 RCAN3Q9UKA8 241 aa22.34■■□□□ 1.17
SREBF1-213ENST00000485080 PPIP5K2O43314 1243 aa22.33■■□□□ 1.17
SREBF1-213ENST00000485080 GNAI3P08754 354 aa22.33■■□□□ 1.17
SREBF1-213ENST00000485080 DPY19L2Q6NUT2 758 aa22.33■■□□□ 1.17
SREBF1-213ENST00000485080 TNNQ9UQP3 1299 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 556.7 ms