RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 IFIT5Q13325 482 aaKnown RBP32.01■■■□□ 2.71
SHOX2-204ENST00000483851 TTLL11Q8NHH1 800 aa32.01■■■□□ 2.71
SHOX2-204ENST00000483851 DAXXQ9UER7 740 aaPredicted RBP32.01■■■□□ 2.71
SHOX2-204ENST00000483851 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP32■■■□□ 2.71
SHOX2-204ENST00000483851 CHMLP26374 656 aa31.99■■■□□ 2.71
SHOX2-204ENST00000483851 SUSD4Q5VX71 490 aa31.99■■■□□ 2.71
SHOX2-204ENST00000483851 NIP7Q9Y221 180 aaKnown RBP eCLIP31.99■■■□□ 2.71
SHOX2-204ENST00000483851 BECN1Q14457 450 aa31.98■■■□□ 2.71
SHOX2-204ENST00000483851 CCDC8Q9H0W5 538 aaPredicted RBP31.98■■■□□ 2.71
SHOX2-204ENST00000483851 NARFQ9UHQ1 456 aa31.97■■■□□ 2.71
SHOX2-204ENST00000483851 LAMB2P55268 1798 aa31.97■■■□□ 2.71
SHOX2-204ENST00000483851 EPB41L2O43491 1005 aaKnown RBP31.97■■■□□ 2.71
SHOX2-204ENST00000483851 RTCBQ9Y3I0 505 aaKnown RBP31.97■■■□□ 2.71
SHOX2-204ENST00000483851 C4BP0C0L5 1744 aa31.96■■■□□ 2.71
SHOX2-204ENST00000483851 KCNQ4P56696 695 aa31.95■■■□□ 2.71
SHOX2-204ENST00000483851 SYNE4Q8N205 404 aa31.95■■■□□ 2.71
SHOX2-204ENST00000483851 EVI5LQ96CN4 794 aa31.95■■■□□ 2.71
SHOX2-204ENST00000483851 ESYT1Q9BSJ8 1104 aa31.95■■■□□ 2.71
SHOX2-204ENST00000483851 USP26Q9BXU7 913 aa31.95■■■□□ 2.71
SHOX2-204ENST00000483851 ANKRD18BA2A2Z9 1011 aa31.95■■■□□ 2.7
SHOX2-204ENST00000483851 GNPATO15228 680 aa31.94■■■□□ 2.7
SHOX2-204ENST00000483851 NTSR2O95665 410 aa31.94■■■□□ 2.7
SHOX2-204ENST00000483851 TAF7LQ5H9L4 462 aa31.94■■■□□ 2.7
SHOX2-204ENST00000483851 SLC27A3Q5K4L6 730 aa31.94■■■□□ 2.7
SHOX2-204ENST00000483851 ATP5JP18859 108 aa31.93■■■□□ 2.7
SHOX2-204ENST00000483851 ZNF594Q96JF6 807 aaPredicted RBP31.93■■■□□ 2.7
SHOX2-204ENST00000483851 DBNLQ9UJU6 430 aaKnown RBP31.93■■■□□ 2.7
SHOX2-204ENST00000483851 ITGA6P23229 1130 aa31.93■■■□□ 2.7
SHOX2-204ENST00000483851 LRRC24Q50LG9 513 aa31.93■■■□□ 2.7
SHOX2-204ENST00000483851 TLR7Q9NYK1 1049 aaKnown RBP31.93■■■□□ 2.7
SHOX2-204ENST00000483851 CEP126Q9P2H0 1117 aa31.93■■■□□ 2.7
SHOX2-204ENST00000483851 AKAP2Q9Y2D5 859 aa31.92■■■□□ 2.7
SHOX2-204ENST00000483851 RTL9Q8NET4 1388 aa31.92■■■□□ 2.7
SHOX2-204ENST00000483851 FBXO41Q8TF61 875 aa31.91■■■□□ 2.7
SHOX2-204ENST00000483851 GREM2Q9H772 168 aa31.91■■■□□ 2.7
SHOX2-204ENST00000483851 DDX60Q8IY21 1712 aaKnown RBP31.91■■■□□ 2.7
SHOX2-204ENST00000483851 ZNF609O15014 1411 aa31.9■■■□□ 2.7
SHOX2-204ENST00000483851 ADRA2BP18089 450 aa31.9■■■□□ 2.7
SHOX2-204ENST00000483851 HIP1O00291 1037 aa31.89■■■□□ 2.7
SHOX2-204ENST00000483851 ZPR1O75312 459 aa31.89■■■□□ 2.7
SHOX2-204ENST00000483851 PUS3Q9BZE2 481 aaKnown RBP31.89■■■□□ 2.69
SHOX2-204ENST00000483851 TICAM2Q86XR7 235 aa31.87■■■□□ 2.69
SHOX2-204ENST00000483851 BCL2L12Q9HB09 334 aa31.87■■■□□ 2.69
SHOX2-204ENST00000483851 RIPOR2Q9Y4F9 1068 aa31.87■■■□□ 2.69
SHOX2-204ENST00000483851 LRP5O75197 1615 aa31.87■■■□□ 2.69
SHOX2-204ENST00000483851 MAP4K4O95819 1239 aaPredicted RBP31.86■■■□□ 2.69
SHOX2-204ENST00000483851 RUFY2Q8WXA3 655 aa31.86■■■□□ 2.69
SHOX2-204ENST00000483851 DBNDD2Q9BQY9 259 aa31.86■■■□□ 2.69
SHOX2-204ENST00000483851 CCDC152Q4G0S7 254 aa31.86■■■□□ 2.69
SHOX2-204ENST00000483851 LDHAL6AQ6ZMR3 332 aa31.86■■■□□ 2.69
SHOX2-204ENST00000483851 COL24A1Q17RW2 1714 aa31.86■■■□□ 2.69
SHOX2-204ENST00000483851 USPL1Q5W0Q7 1092 aa31.85■■■□□ 2.69
SHOX2-204ENST00000483851 CCDC85AQ96PX6 553 aaPredicted RBP31.85■■■□□ 2.69
SHOX2-204ENST00000483851 KIF2CQ99661 725 aa31.85■■■□□ 2.69
SHOX2-204ENST00000483851 NYXQ9GZU5 481 aa31.85■■■□□ 2.69
SHOX2-204ENST00000483851 TRAPPC3LQ5T215 181 aa31.84■■■□□ 2.69
SHOX2-204ENST00000483851 ARHGEF1Q92888 912 aaKnown RBP31.84■■■□□ 2.69
SHOX2-204ENST00000483851 LRRC4BQ9NT99 713 aa31.84■■■□□ 2.69
SHOX2-204ENST00000483851 TRIM37O94972 964 aa31.84■■■□□ 2.69
SHOX2-204ENST00000483851 HCLS1P14317 486 aaPredicted RBP31.84■■■□□ 2.69
SHOX2-204ENST00000483851 BOLA2Q9H3K6 86 aa31.84■■■□□ 2.69
SHOX2-204ENST00000483851 RFX7Q2KHR2 1363 aa31.84■■■□□ 2.69
SHOX2-204ENST00000483851 C4AP0C0L4 1744 aa31.84■■■□□ 2.69
SHOX2-204ENST00000483851 A0A1B0GUL7 405 aa31.83■■■□□ 2.69
SHOX2-204ENST00000483851 SGSM2O43147 1006 aa31.83■■■□□ 2.69
SHOX2-204ENST00000483851 RXRBP28702 533 aa31.83■■■□□ 2.69
SHOX2-204ENST00000483851 SLC10A5Q5PT55 438 aa31.83■■■□□ 2.69
SHOX2-204ENST00000483851 PPIL4Q8WUA2 492 aaKnown RBP eCLIP31.83■■■□□ 2.69
SHOX2-204ENST00000483851 SNX21Q969T3 373 aa31.83■■■□□ 2.69
SHOX2-204ENST00000483851 NEUROD6Q96NK8 337 aa31.82■■■□□ 2.69
SHOX2-204ENST00000483851 HAUS7Q99871 368 aa31.82■■■□□ 2.69
SHOX2-204ENST00000483851 DIAPH3Q9NSV4 1193 aa31.82■■■□□ 2.69
SHOX2-204ENST00000483851 SETDB2Q96T68 719 aa31.82■■■□□ 2.68
SHOX2-204ENST00000483851 CNNM1Q9NRU3 951 aa31.82■■■□□ 2.68
SHOX2-204ENST00000483851 RIC1Q4ADV7 1423 aa31.81■■■□□ 2.68
SHOX2-204ENST00000483851 FAM177BA6PVY3 158 aa31.81■■■□□ 2.68
SHOX2-204ENST00000483851 TBC1D9BQ66K14 1250 aa31.81■■■□□ 2.68
SHOX2-204ENST00000483851 RFC4P35249 363 aa31.8■■■□□ 2.68
SHOX2-204ENST00000483851 DEKP35659 375 aaKnown RBP31.8■■■□□ 2.68
SHOX2-204ENST00000483851 TIMM10P62072 90 aa31.8■■■□□ 2.68
SHOX2-204ENST00000483851 MROH5Q6ZUA9 1318 aa31.8■■■□□ 2.68
SHOX2-204ENST00000483851 UBR3Q6ZT12 1888 aa31.8■■■□□ 2.68
SHOX2-204ENST00000483851 ABCC12Q96J65 1359 aa31.8■■■□□ 2.68
SHOX2-204ENST00000483851 MCCP23508 829 aa31.8■■■□□ 2.68
SHOX2-204ENST00000483851 NFKBIBQ15653 356 aa31.8■■■□□ 2.68
SHOX2-204ENST00000483851 TBC1D2Q9BYX2 928 aa31.8■■■□□ 2.68
SHOX2-204ENST00000483851 SF3B3Q15393 1217 aaKnown RBP31.79■■■□□ 2.68
SHOX2-204ENST00000483851 METTL24Q5JXM2 366 aa31.79■■■□□ 2.68
SHOX2-204ENST00000483851 SPEF2Q9C093 1822 aa31.79■■■□□ 2.68
SHOX2-204ENST00000483851 RABEP1Q15276 862 aa31.78■■■□□ 2.68
SHOX2-204ENST00000483851 IL27Q8NEV9 243 aa31.78■■■□□ 2.68
SHOX2-204ENST00000483851 SRP68Q9UHB9 627 aaKnown RBP31.78■■■□□ 2.68
SHOX2-204ENST00000483851 RAD50Q92878 1312 aa31.78■■■□□ 2.68
SHOX2-204ENST00000483851 ANO2Q9NQ90 1003 aa31.78■■■□□ 2.68
SHOX2-204ENST00000483851 PLSCR1O15162 318 aa31.77■■■□□ 2.68
SHOX2-204ENST00000483851 ANAPC15P60006 121 aa31.77■■■□□ 2.68
SHOX2-204ENST00000483851 VGLL2Q8N8G2 317 aa31.77■■■□□ 2.68
SHOX2-204ENST00000483851 SSFA2P28290 1259 aa31.76■■■□□ 2.68
SHOX2-204ENST00000483851 CCDC158Q5M9N0 1113 aa31.76■■■□□ 2.68
SHOX2-204ENST00000483851 IL17RAQ96F46 866 aa31.76■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms